MD15G1442400.v1.1

Domain of unknown function (DUF2828)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0021119
Physical Location & Seq
Reverse (-)
54276978 .. 54278585
1608 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1442400.v1.1.491

Sequence Viewer

Length: 1608 bp
ATGACGAATCCTGCCAAAAAAATCCTCCCCTCGGTTGTGAAGGCAAGCAATTACACAACCGCTGCTGCTGATCTTCTTCTTCGTCCTCCCCCGCCTTCAGACGCAGATCTGCGCAAACAACCCCAATCCATGGGGGACCCTTGCCTTGATCTGTATTTTGGCGTCCAAGTCCAACCAGACCCAGCCACCCGGACGCGGACGGCCTATAAATATCTCAACCAAGTGCTGCCGATGGCCTGGTCCCACAATCCCCTCACCACCCTCAAGCTCATTTGTAACCTACGGGACGATTCGAATGATCTCGGAAAATCTGATGAAAAAGCCTTCTACAGTGCCGCCTTATGGCTCCACCGCAACCACCCCAAGACTCTTGCCTGCAACGCCGCCTCTATCGCCGGCGAGTTTACCGAGTCGGTCGGGACTATGGATGACTTCGTCCAGATTCTCAACCGCCTTGCACGAGCCCGTGACAGGTACGAGGGTGACTCGGATTATCGCTTCTTACTCGACCGGGTTTCTGATCTCTTTGCGGACCACTTGCGCTCTGATATGCGAAACTTGAAGCAGCAGCAGCAGCAGCCTTACATGGACATAAGCTCAGCAGCGTTGTATTGCCCTCCCATCGGCTCCTCCCTGGACCGCTCCTCCACTCTGCTCTGCGAAAGCATTGCCAGGATTCTTTTCCCCCGAGAAGAATCATGCCCGGAGGAGGAATACCAAGGCCTTGATTACGCCCAGAGAGTCCGAGCTCGCCTCCGGACGGAGGTGCTGGTGCCCTTGACAAACTTCTTGCTCTCTAACTCCTCGCTCACTCATCGAGGATTCTGCCCCGTTAAGAAGTATTTGGATGAGTTGAAAGGCGGCCTCGGCCAGCCCATTGAGCCCGGCGCTCTCCTCCCACATGACATCATAGGGTACGTGGATGATGAGGATGTCGGGCAAGCAGCTGAGCTTCAGTGGAGGAGAATGGTGGAGGACATCTACTTGAAGCAGGGCAATAAGTTGAGCAACTGCTTGGCCGTGTGTAACGTCTCGCCTACAGTGGCCCACATGAATGTGTCGGTGGCCTTGTCAGTCTTGGCGTCCCAACTGAGTGAAGAGCCGTGGAAAGGAAAGGTGATCAATTTCAGTTCGAACCCTCAGCTGCACAATTTGGCCACACCGCAGGGCGATGATGATCTCAAGTCCATGTGCGCGTTTGTGAGGAGGATGCATTGCGCCCTGGAAATTGATCTTGGCAAAGTGTTTGATCTGATTCTCGAGGTGGCTGTGGATGGGAATTTGAGGCCGGATCAGATGATCAAGAAGGTCTTGGTGTTGACCGACTTCCAAACCATTGACCTGGCGGAGTCTGATTATGAGGCAATACAAAACAAGTTTAAGGCGAAAGGGTACGAAGATGCGGTGCCGCAGATTGTGTATTGGAAGCTCCAGTCATGGGGGACTCCCGTGGCGCCTTGTAGGCGACCAGGGGTGAGCACCCTGGATGGCTTCTCGGACAACTTGTTGAAGTTGTTCTTGGATAGTAATGGGGAAGTTGGCCCGTACCATGTCATGGAAGCAGCCATCTCTGGCAAAGAGTATGAGAACCTGGCTGTGTGCGACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF2828

Protein Analysis

536

Amino Acids

59.77

Weight (kDa)

5.3

Isoelectric Point (pI)

43.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF2828 PF11443 42 - 153 1.5e-24 Domain of unknown function (DUF2828)
DUF2828 PF11443 152 - 264 6.8e-26 Domain of unknown function (DUF2828)
DUF7788 PF25043 337 - 513 9.7e-47 Domain of unknown function (DUF7788)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0021119)

Species Orthologous Gene IDs
malus_domestica MD00G1160400.v1.1 MD10G1031200.v1.1 MD10G1031400.v1.1 MD15G1442400.v1.1
prunus_persica Prupe.5G229700_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 113
AccB1I GGYRCC 3 cut(s) 772, 1405, 1453
AccB7I CCANNNNNTGG 2 cut(s) 130, 1555
AccBSI CCGCTC 1 cut(s) 642
AccII CGCG 2 cut(s) 196, 1196
AccIII TCCGGA 1 cut(s) 756
AclWI GGATC 1 cut(s) 1299
AcoI YGGCCR 3 cut(s) 868, 1017, 1155
AcsI RAATTY 1 cut(s) 1279
AcuI CTGAAG 2 cut(s) 81, 938
AcyI GRCGYC 3 cut(s) 162, 1082, 1454
AfaI GTAC 4 cut(s) 476, 917, 1394, 1547
AgsI TTSAA 4 cut(s) 562, 856, 988, 1510
AjnI CCWGG 8 cut(s) 236, 633, 671, 1221, 1341, 1468, 1482, 1590
AjuI GAANNNNNNNTTGG 4 cut(s) 1218, 1250, 1502, 1534
AluBI AGCT 7 cut(s) 268, 597, 749, 947, 952, 1144, 1429
AluI AGCT 7 cut(s) 268, 597, 749, 947, 952, 1144, 1429
Alw21I GWGCWC 2 cut(s) 751, 1481
Alw26I GTCTC 1 cut(s) 1036
AlwI GGATC 1 cut(s) 1299
Ama87I CYCGRG 2 cut(s) 687, 1259
Aor13HI TCCGGA 1 cut(s) 756
ApoI RAATTY 1 cut(s) 1279
Asp700I GAANNNNTTC 1 cut(s) 1514
AspLEI GCGC 6 cut(s) 114, 543, 890, 1196, 1220, 1456
AspS9I GGNCC 6 cut(s) 136, 240, 532, 637, 1045, 1541
AsuC2I CCSGG 4 cut(s) 190, 512, 704, 885
AsuHPI GGTGA 4 cut(s) 247, 494, 1129, 1486
AsuII TTCGAA 2 cut(s) 293, 1133
AvaI CYCGRG 2 cut(s) 687, 1259
AvaII GGWCC 4 cut(s) 136, 240, 532, 637
BaeGI GKGCMC 1 cut(s) 777
BaeI ACNNNNGTAYC 2 cut(s) 466, 499
BalI TGGCCA 1 cut(s) 1157
BanI GGYRCC 3 cut(s) 772, 1405, 1453
BanII GRGCYC 3 cut(s) 466, 751, 885
BauI CACGAG 1 cut(s) 459
Bbv12I GWGCWC 2 cut(s) 751, 1481
BbvCI CCTCAGC 1 cut(s) 1140
BccI CCATC 5 cut(s) 226, 629, 1268, 1481, 1574
BceAI ACGGC 3 cut(s) 216, 1004, 1087
BcgI CGANNNNNNTGC 4 cut(s) 650, 684, 807, 841
BciT130I CCWGG 8 cut(s) 238, 635, 673, 1223, 1343, 1470, 1484, 1592
BclI TGATCA 2 cut(s) 1119, 1299
BcnI CCSGG 4 cut(s) 190, 512, 704, 885
BcoDI GTCTC 1 cut(s) 1036
BfmI CTRYAG 2 cut(s) 328, 1038
BfoI RGCGCY 2 cut(s) 891, 1457
BglI GCCNNNNNGGC 1 cut(s) 1462
BglII AGATCT 1 cut(s) 106
BlpI GCTNAGC 2 cut(s) 598, 948
Bme18I GGWCC 4 cut(s) 136, 240, 532, 637
BmeT110I CYCGRG 2 cut(s) 687, 1259
BmgT120I GGNCC 6 cut(s) 136, 240, 532, 637, 1045, 1541
BmiI GGNNCC 8 cut(s) 137, 138, 242, 347, 628, 774, 1407, 1455
BmsI GCATC 2 cut(s) 1200, 1390
BplI GAGNNNNNCTC 4 cut(s) 470, 502, 738, 770
BpmI CTGGAG 1 cut(s) 1415
Bpu10I CCTNAGC 1 cut(s) 1140
Bpu1102I GCTNAGC 2 cut(s) 598, 948
Bpu14I TTCGAA 2 cut(s) 293, 1133
BpuEI CTTGAG 2 cut(s) 248, 1166
BpuMI CCSGG 4 cut(s) 190, 512, 704, 885
BsaAI YACGTR 1 cut(s) 919
BsaBI GATNNNNATC 1 cut(s) 1176
BsaHI GRCGYC 3 cut(s) 162, 1082, 1454
BsaWI WCCGGW 1 cut(s) 756
BsaXI ACNNNNNCTCC 2 cut(s) 629, 659
Bse118I RCCGGY 1 cut(s) 395
Bse1I ACTGG 1 cut(s) 1432
Bse3DI GCAATG 2 cut(s) 666, 1213
Bse8I GATNNNNATC 1 cut(s) 1176
BseAI TCCGGA 1 cut(s) 756
BseBI CCWGG 8 cut(s) 238, 635, 673, 1223, 1343, 1470, 1484, 1592
BseGI GGATG 7 cut(s) 433, 853, 928, 937, 1215, 1279, 1492
BseJI GATNNNNATC 1 cut(s) 1176
BseMI GCAATG 2 cut(s) 666, 1213
BseMII CTCAG 4 cut(s) 612, 939, 1082, 1154
BseNI ACTGG 1 cut(s) 1432
BseRI GAGGAG 7 cut(s) 619, 634, 722, 793, 884, 976, 1219
BseSI GKGCMC 1 cut(s) 777
BseYI CCCAGC 1 cut(s) 181
BsgI GTGCAG 1 cut(s) 1130
Bsh1236I CGCG 2 cut(s) 196, 1196
Bsh1285I CGRYCG 2 cut(s) 417, 511
BshNI GGYRCC 3 cut(s) 772, 1405, 1453
BsiEI CGRYCG 2 cut(s) 417, 511
BsiHKAI GWGCWC 2 cut(s) 751, 1481
BsiHKCI CYCGRG 2 cut(s) 687, 1259
BsiSI CCGG 7 cut(s) 190, 396, 511, 704, 757, 885, 1289
BslFI GGGAC 6 cut(s) 149, 226, 299, 433, 1069, 1456
BsmAI GTCTC 1 cut(s) 1036
BsmBI CGTCTC 1 cut(s) 1036
BsmFI GGGAC 6 cut(s) 149, 226, 299, 433, 1069, 1456
BsoBI CYCGRG 2 cut(s) 687, 1259
Bsp119I TTCGAA 2 cut(s) 293, 1133
Bsp1286I GDGCHC 5 cut(s) 466, 751, 777, 885, 1481
Bsp13I TCCGGA 1 cut(s) 756
Bsp1720I GCTNAGC 2 cut(s) 598, 948
Bsp19I CCATGG 1 cut(s) 129
BspCNI CTCAG 4 cut(s) 611, 940, 1083, 1153
BspEI TCCGGA 1 cut(s) 756
BspFNI CGCG 2 cut(s) 196, 1196
BspLI GGNNCC 8 cut(s) 137, 138, 242, 347, 628, 774, 1407, 1455
BspPI GGATC 1 cut(s) 1299
BspQI GCTCTTC 1 cut(s) 1092
BspT104I TTCGAA 2 cut(s) 293, 1133
BspT107I GGYRCC 3 cut(s) 772, 1405, 1453
BsrBI CCGCTC 1 cut(s) 642
BsrDI GCAATG 2 cut(s) 666, 1213
BsrFI RCCGGY 1 cut(s) 395
BsrI ACTGG 1 cut(s) 1432
BssAI RCCGGY 1 cut(s) 395
BssNI GRCGYC 3 cut(s) 162, 1082, 1454
BssSI CACGAG 1 cut(s) 459
BssT1I CCWWGG 2 cut(s) 129, 718
Bst2BI CACGAG 1 cut(s) 459
Bst2UI CCWGG 8 cut(s) 238, 635, 673, 1223, 1343, 1470, 1484, 1592
Bst4CI ACNGT 2 cut(s) 332, 1042
Bst6I CTCTTC 1 cut(s) 1092
BstACI GRCGYC 3 cut(s) 162, 1082, 1454
BstBAI YACGTR 1 cut(s) 919
BstBI TTCGAA 2 cut(s) 293, 1133
BstC8I GCNNGC 6 cut(s) 46, 376, 397, 751, 872, 942
BstDEI CTNAG 4 cut(s) 598, 948, 1091, 1140
BstDSI CCRYGG 3 cut(s) 129, 1103, 1449
BstF5I GGATG 7 cut(s) 433, 853, 928, 937, 1215, 1279, 1492
BstFNI CGCG 2 cut(s) 196, 1196
BstH2I RGCGCY 2 cut(s) 891, 1457
BstHHI GCGC 6 cut(s) 114, 543, 890, 1196, 1220, 1456
BstMAI GTCTC 1 cut(s) 1036
BstMCI CGRYCG 2 cut(s) 417, 511
BstMWI GCNNNNNNNGC 8 cut(s) 380, 392, 571, 574, 577, 867, 880, 1462
BstNI CCWGG 8 cut(s) 238, 635, 673, 1223, 1343, 1470, 1484, 1592
BstSFI CTRYAG 2 cut(s) 328, 1038
BstSLI GKGCMC 1 cut(s) 777
BstUI CGCG 2 cut(s) 196, 1196
BstX2I RGATCY 1 cut(s) 106
BstXI CCANNNNNNTGG 1 cut(s) 1342
BstYI RGATCY 1 cut(s) 106
BtgI CCRYGG 3 cut(s) 129, 1103, 1449
BtgZI GCGATG 1 cut(s) 1185
BtsCI GGATG 7 cut(s) 433, 853, 928, 937, 1215, 1279, 1492
BtsIMutI CAGTG 3 cut(s) 337, 962, 1047
Cac8I GCNNGC 6 cut(s) 46, 376, 397, 751, 872, 942
CfoI GCGC 6 cut(s) 114, 543, 890, 1196, 1220, 1456
Cfr10I RCCGGY 1 cut(s) 395
Cfr13I GGNCC 6 cut(s) 136, 240, 532, 637, 1045, 1541
CseI GACGC 4 cut(s) 110, 151, 202, 1071
Csp6I GTAC 4 cut(s) 475, 916, 1393, 1546
CviAII CATG 9 cut(s) 130, 586, 699, 902, 1051, 1189, 1437, 1550, 1555
CviQI GTAC 4 cut(s) 475, 916, 1393, 1546
DdeI CTNAG 4 cut(s) 598, 948, 1091, 1140
DinI GGCGCC 1 cut(s) 1455
EaeI YGGCCR 3 cut(s) 868, 1017, 1155
Eam1104I CTCTTC 1 cut(s) 1092
EarI CTCTTC 1 cut(s) 1092
EciI GGCGGA 1 cut(s) 1361
Ecl136II GAGCTC 1 cut(s) 749
Eco130I CCWWGG 2 cut(s) 129, 718
Eco147I AGGCCT 1 cut(s) 723
Eco24I GRGCYC 3 cut(s) 466, 751, 885
Eco47I GGWCC 4 cut(s) 136, 240, 532, 637
Eco53kI GAGCTC 1 cut(s) 749
Eco57I CTGAAG 2 cut(s) 81, 938
Eco88I CYCGRG 2 cut(s) 687, 1259
EcoICRI GAGCTC 1 cut(s) 749
EcoO109I RGGNCCY 1 cut(s) 136
EcoRII CCWGG 8 cut(s) 236, 633, 671, 1221, 1341, 1468, 1482, 1590
EcoT14I CCWWGG 2 cut(s) 129, 718
EcoT22I ATGCAT 1 cut(s) 1215
EcoT38I GRGCYC 3 cut(s) 466, 751, 885
EgeI GGCGCC 1 cut(s) 1455
EheI GGCGCC 1 cut(s) 1455
ErhI CCWWGG 2 cut(s) 129, 718
Esp3I CGTCTC 1 cut(s) 1036
FaeI CATG 9 cut(s) 133, 589, 702, 905, 1054, 1192, 1440, 1553, 1558
FalI AAGNNNNNCTT 4 cut(s) 1295, 1327, 1502, 1534
FaqI GGGAC 6 cut(s) 149, 226, 299, 433, 1069, 1456
FatI CATG 9 cut(s) 129, 585, 698, 901, 1050, 1188, 1436, 1549, 1554
FauI CCCGC 1 cut(s) 99
FbaI TGATCA 2 cut(s) 1119, 1299
FokI GGATG 7 cut(s) 440, 860, 935, 944, 1222, 1286, 1499
FriOI GRGCYC 3 cut(s) 466, 751, 885
FspI TGCGCA 1 cut(s) 113
GlaI GCGC 6 cut(s) 113, 542, 889, 1195, 1219, 1455
GsaI CCCAGC 1 cut(s) 185
GsuI CTGGAG 1 cut(s) 1415
HaeII RGCGCY 2 cut(s) 891, 1457
HapII CCGG 7 cut(s) 190, 396, 511, 704, 757, 885, 1289
HgaI GACGC 4 cut(s) 110, 151, 202, 1071
HhaI GCGC 6 cut(s) 114, 543, 890, 1196, 1220, 1456
Hin1I GRCGYC 3 cut(s) 162, 1082, 1454
Hin1II CATG 9 cut(s) 133, 589, 702, 905, 1054, 1192, 1440, 1553, 1558
Hin6I GCGC 6 cut(s) 112, 541, 888, 1194, 1218, 1454
HinP1I GCGC 6 cut(s) 112, 541, 888, 1194, 1218, 1454
HincII GTYRAC 1 cut(s) 1320
HindII GTYRAC 1 cut(s) 1320
HpaII CCGG 7 cut(s) 190, 396, 511, 704, 757, 885, 1289
HphI GGTGA 4 cut(s) 247, 494, 1129, 1486
Hpy166II GTNNAC 2 cut(s) 405, 1320
Hpy188III TCNNGA 5 cut(s) 418, 439, 757, 1259, 1303
Hpy8I GTNNAC 2 cut(s) 405, 1320
HpyAV CCTTC 4 cut(s) 34, 105, 334, 1300
HpyCH4III ACNGT 2 cut(s) 332, 1042
HpyCH4IV ACGT 2 cut(s) 918, 1029
HpyCH4V TGCA 4 cut(s) 378, 458, 1147, 1213
HpyF10VI GCNNNNNNNGC 8 cut(s) 380, 392, 571, 574, 577, 867, 880, 1462
HpyF3I CTNAG 4 cut(s) 598, 948, 1091, 1140
HpySE526I ACGT 2 cut(s) 918, 1029
Hsp92I GRCGYC 3 cut(s) 162, 1082, 1454
Hsp92II CATG 9 cut(s) 133, 589, 702, 905, 1054, 1192, 1440, 1553, 1558
HspAI GCGC 6 cut(s) 112, 541, 888, 1194, 1218, 1454
KasI GGCGCC 1 cut(s) 1453
KflI GGGWCCC 1 cut(s) 136
Kpn2I TCCGGA 1 cut(s) 756
KroI GCCGGC 1 cut(s) 395
KroNI GCCGGC 1 cut(s) 397
Ksp22I TGATCA 2 cut(s) 1119, 1299
LguI GCTCTTC 1 cut(s) 1092
LmnI GCTCC 4 cut(s) 351, 632, 647, 1434
LweI GCATC 2 cut(s) 1200, 1390
MaeII ACGT 2 cut(s) 918, 1029
MaeIII GTNAC 4 cut(s) 275, 467, 482, 1025
MbiI CCGCTC 1 cut(s) 642
MboII GAAGA 6 cut(s) 65, 68, 71, 704, 1109, 1409
MflI RGATCY 1 cut(s) 106
MhlI GDGCHC 5 cut(s) 466, 751, 777, 885, 1481
MlsI TGGCCA 1 cut(s) 1157
MluCI AATT 5 cut(s) 49, 1123, 1150, 1227, 1279
MluNI TGGCCA 1 cut(s) 1157
Mly113I GGCGCC 1 cut(s) 1454
MlyI GAGTC 6 cut(s) 361, 419, 479, 750, 1358, 1438
MmeI TCCRAC 1 cut(s) 196
Mox20I TGGCCA 1 cut(s) 1157
Mph1103I ATGCAT 1 cut(s) 1215
MreI CGCCGGCG 1 cut(s) 395
MroI TCCGGA 1 cut(s) 756
MroNI GCCGGC 1 cut(s) 395
MroXI GAANNNNTTC 1 cut(s) 1514
MscI TGGCCA 1 cut(s) 1157
MseI TTAA 2 cut(s) 834, 1380
MslI CAYNNNNRTG 2 cut(s) 1053, 1055
Msp20I TGGCCA 1 cut(s) 1157
MspA1I CMGCKG 3 cut(s) 62, 947, 1144
MspI CCGG 7 cut(s) 190, 396, 511, 704, 757, 885, 1289
MvaI CCWGG 8 cut(s) 238, 635, 673, 1223, 1343, 1470, 1484, 1592
MvnI CGCG 2 cut(s) 196, 1196
MwoI GCNNNNNNNGC 8 cut(s) 380, 392, 571, 574, 577, 867, 880, 1462
NaeI GCCGGC 1 cut(s) 397
NarI GGCGCC 1 cut(s) 1454
NciI CCSGG 4 cut(s) 190, 512, 704, 885
NcoI CCATGG 1 cut(s) 129
NgoMIV GCCGGC 1 cut(s) 395
NlaIII CATG 9 cut(s) 133, 589, 702, 905, 1054, 1192, 1440, 1553, 1558
NlaIV GGNNCC 8 cut(s) 137, 138, 242, 347, 628, 774, 1407, 1455
NmeAIII GCCGAG 1 cut(s) 846
NmuCI GTSAC 2 cut(s) 467, 482
NsbI TGCGCA 1 cut(s) 113
NsiI ATGCAT 1 cut(s) 1215
NspV TTCGAA 2 cut(s) 293, 1133
PaeR7I CTCGAG 1 cut(s) 1259
PceI AGGCCT 1 cut(s) 723
PciSI GCTCTTC 1 cut(s) 1092
PdiI GCCGGC 1 cut(s) 397
PdmI GAANNNNTTC 1 cut(s) 1514
PfeI GAWTC 7 cut(s) 7, 290, 442, 676, 695, 822, 1255
PflFI GACNNNGTC 1 cut(s) 434
PflMI CCANNNNNTGG 2 cut(s) 130, 1555
PleI GAGTC 6 cut(s) 361, 418, 479, 749, 1357, 1438
PluTI GGCGCC 1 cut(s) 1457
PpsI GAGTC 6 cut(s) 361, 418, 479, 749, 1357, 1438
Ppu21I YACGTR 1 cut(s) 919
PpuMI RGGWCCY 1 cut(s) 136
Psp124BI GAGCTC 1 cut(s) 751
Psp5II RGGWCCY 1 cut(s) 136
Psp6I CCWGG 8 cut(s) 236, 633, 671, 1221, 1341, 1468, 1482, 1590
PspFI CCCAGC 1 cut(s) 181
PspGI CCWGG 8 cut(s) 236, 633, 671, 1221, 1341, 1468, 1482, 1590
PspN4I GGNNCC 8 cut(s) 137, 138, 242, 347, 628, 774, 1407, 1455
PspPI GGNCC 6 cut(s) 136, 240, 532, 637, 1045, 1541
PspPPI RGGWCCY 1 cut(s) 136
PsuI RGATCY 1 cut(s) 106
PsyI GACNNNGTC 1 cut(s) 434
PvuII CAGCTG 2 cut(s) 947, 1144
RsaI GTAC 4 cut(s) 476, 917, 1394, 1547
RsaNI GTAC 4 cut(s) 475, 916, 1393, 1546
RseI CAYNNNNRTG 2 cut(s) 1053, 1055
SacI GAGCTC 1 cut(s) 751
SapI GCTCTTC 1 cut(s) 1092
SaqAI TTAA 2 cut(s) 834, 1380
Sau96I GGNCC 6 cut(s) 136, 240, 532, 637, 1045, 1541
SchI GAGTC 6 cut(s) 361, 419, 479, 750, 1358, 1438
SduI GDGCHC 5 cut(s) 466, 751, 777, 885, 1481
SfaNI GCATC 2 cut(s) 1200, 1390
SfcI CTRYAG 2 cut(s) 328, 1038
SfoI GGCGCC 1 cut(s) 1455
Sfr274I CTCGAG 1 cut(s) 1259
SfuI TTCGAA 2 cut(s) 293, 1133
SgrAI CRCCGGYG 1 cut(s) 395
SinI GGWCC 4 cut(s) 136, 240, 532, 637
SlaI CTCGAG 1 cut(s) 1259
SmiMI CAYNNNNRTG 2 cut(s) 1053, 1055
SmlI CTYRAG 3 cut(s) 263, 1181, 1259
SmoI CTYRAG 3 cut(s) 263, 1181, 1259
Sse9I AATT 5 cut(s) 49, 1123, 1150, 1227, 1279
SseBI AGGCCT 1 cut(s) 723
SspDI GGCGCC 1 cut(s) 1453
SstI GAGCTC 1 cut(s) 751
StuI AGGCCT 1 cut(s) 723
StyI CCWWGG 2 cut(s) 129, 718
TaaI ACNGT 2 cut(s) 332, 1042
TaiI ACGT 2 cut(s) 921, 1032
TaqI TCGA 5 cut(s) 293, 507, 817, 1133, 1260
TaqII GACCGA 2 cut(s) 403, 1337
TasI AATT 5 cut(s) 49, 1123, 1150, 1227, 1279
TauI GCSGC 4 cut(s) 338, 386, 864, 1411
TfiI GAWTC 7 cut(s) 7, 290, 442, 676, 695, 822, 1255
Tru1I TTAA 2 cut(s) 834, 1380
Tru9I TTAA 2 cut(s) 834, 1380
TscAI CASTG 3 cut(s) 337, 962, 1047
TseFI GTSAC 2 cut(s) 467, 482
Tsp45I GTSAC 2 cut(s) 467, 482
TspDTI ATGAA 2 cut(s) 330, 1067
TspGWI ACGGA 1 cut(s) 776
TspRI CASTG 3 cut(s) 337, 962, 1047
Tth111I GACNNNGTC 1 cut(s) 434
Van91I CCANNNNNTGG 2 cut(s) 130, 1555
VpaK11BI GGWCC 4 cut(s) 136, 240, 532, 637
XapI RAATTY 1 cut(s) 1279
XhoI CTCGAG 1 cut(s) 1259
XmnI GAANNNNTTC 1 cut(s) 1514
Zsp2I ATGCAT 1 cut(s) 1215
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.