Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD16G1206400.v1.1 |
| prunus_persica | Prupe.1G027400_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 704 |
| AccII | CGCG | 1 cut(s) | 1373 |
| AciI | CCGC | 3 cut(s) | 174, 1248, 1371 |
| AcsI | RAATTY | 5 cut(s) | 28, 113, 688, 840, 1194 |
| AcuI | CTGAAG | 2 cut(s) | 1287, 1383 |
| AfaI | GTAC | 3 cut(s) | 443, 850, 1166 |
| AfeI | AGCGCT | 1 cut(s) | 1479 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 714, 1603, 1683 |
| AflII | CTTAAG | 1 cut(s) | 1613 |
| AflIII | ACRYGT | 1 cut(s) | 927 |
| AgsI | TTSAA | 9 cut(s) | 28, 143, 485, 577, 772, 953, 1187, 1387, 1655 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 415 |
| AjnI | CCWGG | 1 cut(s) | 1632 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 849, 881 |
| Alw21I | GWGCWC | 2 cut(s) | 51, 1494 |
| Ama87I | CYCGRG | 1 cut(s) | 63 |
| Aor51HI | AGCGCT | 1 cut(s) | 1479 |
| ApeKI | GCWGC | 5 cut(s) | 289, 1295, 1328, 1439, 1442 |
| ApoI | RAATTY | 5 cut(s) | 28, 113, 688, 840, 1194 |
| AseI | ATTAAT | 1 cut(s) | 96 |
| AspLEI | GCGC | 2 cut(s) | 1254, 1480 |
| AspS9I | GGNCC | 3 cut(s) | 382, 609, 1339 |
| AsuHPI | GGTGA | 2 cut(s) | 20, 881 |
| AvaI | CYCGRG | 1 cut(s) | 63 |
| AvaII | GGWCC | 3 cut(s) | 382, 609, 1339 |
| BanII | GRGCYC | 1 cut(s) | 537 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 752, 784 |
| Bbv12I | GWGCWC | 2 cut(s) | 51, 1494 |
| BbvI | GCAGC | 5 cut(s) | 301, 1307, 1340, 1426, 1429 |
| BccI | CCATC | 8 cut(s) | 77, 205, 613, 617, 1091, 1350, 1451, 1715 |
| BciT130I | CCWGG | 1 cut(s) | 1634 |
| BclI | TGATCA | 2 cut(s) | 205, 670 |
| BfaI | CTAG | 6 cut(s) | 192, 453, 779, 845, 1145, 1518 |
| BfmI | CTRYAG | 2 cut(s) | 1333, 1443 |
| BfoI | RGCGCY | 2 cut(s) | 1255, 1481 |
| BfrI | CTTAAG | 1 cut(s) | 1613 |
| BisI | GCNGC | 5 cut(s) | 290, 1296, 1329, 1440, 1443 |
| BlsI | GCNGC | 5 cut(s) | 291, 1297, 1330, 1441, 1444 |
| Bme1390I | CCNGG | 1 cut(s) | 1634 |
| Bme18I | GGWCC | 3 cut(s) | 382, 609, 1339 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 415 |
| BmeT110I | CYCGRG | 1 cut(s) | 63 |
| BmgT120I | GGNCC | 3 cut(s) | 382, 609, 1339 |
| BmiI | GGNNCC | 3 cut(s) | 383, 738, 1340 |
| BmrFI | CCNGG | 1 cut(s) | 1634 |
| BmsI | GCATC | 8 cut(s) | 161, 294, 480, 573, 666, 784, 1039, 1275 |
| BpuEI | CTTGAG | 1 cut(s) | 35 |
| Bsa29I | ATCGAT | 1 cut(s) | 860 |
| BsaJI | CCNNGG | 1 cut(s) | 1633 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 714, 1603, 1683 |
| Bse1I | ACTGG | 1 cut(s) | 1362 |
| Bse3DI | GCAATG | 1 cut(s) | 1354 |
| BseBI | CCWGG | 1 cut(s) | 1634 |
| BseCI | ATCGAT | 1 cut(s) | 860 |
| BseDI | CCNNGG | 1 cut(s) | 1633 |
| BseGI | GGATG | 6 cut(s) | 220, 309, 628, 1054, 1198, 1462 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 714, 1603, 1683 |
| BseMI | GCAATG | 1 cut(s) | 1354 |
| BseMII | CTCAG | 4 cut(s) | 300, 672, 1112, 1197 |
| BseNI | ACTGG | 1 cut(s) | 1362 |
| BseRI | GAGGAG | 2 cut(s) | 673, 1082 |
| BseXI | GCAGC | 5 cut(s) | 301, 1307, 1340, 1426, 1429 |
| BsgI | GTGCAG | 1 cut(s) | 582 |
| Bsh1236I | CGCG | 1 cut(s) | 1373 |
| BshVI | ATCGAT | 1 cut(s) | 860 |
| BsiHKAI | GWGCWC | 2 cut(s) | 51, 1494 |
| BsiHKCI | CYCGRG | 1 cut(s) | 63 |
| BsiSI | CCGG | 2 cut(s) | 252, 1397 |
| BslFI | GGGAC | 4 cut(s) | 377, 523, 925, 1555 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 714, 1603, 1683 |
| BsmFI | GGGAC | 4 cut(s) | 377, 523, 925, 1555 |
| BsmI | GAATGC | 1 cut(s) | 1687 |
| BsoBI | CYCGRG | 1 cut(s) | 63 |
| Bsp1286I | GDGCHC | 3 cut(s) | 51, 537, 1494 |
| Bsp143I | GATC | 3 cut(s) | 205, 246, 670 |
| BspACI | CCGC | 3 cut(s) | 174, 1248, 1371 |
| BspCNI | CTCAG | 4 cut(s) | 301, 673, 1113, 1198 |
| BspDI | ATCGAT | 1 cut(s) | 860 |
| BspFNI | CGCG | 1 cut(s) | 1373 |
| BspHI | TCATGA | 1 cut(s) | 165 |
| BspLI | GGNNCC | 3 cut(s) | 383, 738, 1340 |
| BspMAI | CTGCAG | 1 cut(s) | 1447 |
| BspTI | CTTAAG | 1 cut(s) | 1613 |
| BsrDI | GCAATG | 1 cut(s) | 1354 |
| BsrI | ACTGG | 1 cut(s) | 1362 |
| BssECI | CCNNGG | 1 cut(s) | 1633 |
| BssMI | GATC | 3 cut(s) | 205, 246, 670 |
| Bst2UI | CCWGG | 1 cut(s) | 1634 |
| Bst4CI | ACNGT | 5 cut(s) | 139, 322, 834, 969, 1183 |
| Bst6I | CTCTTC | 1 cut(s) | 1650 |
| BstAFI | CTTAAG | 1 cut(s) | 1613 |
| BstC8I | GCNNGC | 2 cut(s) | 826, 1250 |
| BstDEI | CTNAG | 4 cut(s) | 309, 681, 1121, 1206 |
| BstF5I | GGATG | 6 cut(s) | 220, 309, 628, 1054, 1198, 1462 |
| BstFNI | CGCG | 1 cut(s) | 1373 |
| BstH2I | RGCGCY | 2 cut(s) | 1255, 1481 |
| BstHHI | GCGC | 2 cut(s) | 1254, 1480 |
| BstKTI | GATC | 3 cut(s) | 208, 249, 673 |
| BstMBI | GATC | 3 cut(s) | 205, 246, 670 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1304, 1325 |
| BstNI | CCWGG | 1 cut(s) | 1634 |
| BstNSI | RCATGY | 2 cut(s) | 931, 1224 |
| BstSCI | CCNGG | 1 cut(s) | 1632 |
| BstSFI | CTRYAG | 2 cut(s) | 1333, 1443 |
| BstUI | CGCG | 1 cut(s) | 1373 |
| BstV1I | GCAGC | 5 cut(s) | 301, 1307, 1340, 1426, 1429 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 619 |
| Bsu15I | ATCGAT | 1 cut(s) | 860 |
| BsuTUI | ATCGAT | 1 cut(s) | 860 |
| BtgZI | GCGATG | 1 cut(s) | 1328 |
| BtsCI | GGATG | 6 cut(s) | 220, 309, 628, 1054, 1198, 1462 |
| BtsI | GCAGTG | 1 cut(s) | 751 |
| BtsIMutI | CAGTG | 1 cut(s) | 751 |
| Cac8I | GCNNGC | 2 cut(s) | 826, 1250 |
| CciI | TCATGA | 1 cut(s) | 165 |
| CfoI | GCGC | 2 cut(s) | 1254, 1480 |
| Cfr13I | GGNCC | 3 cut(s) | 382, 609, 1339 |
| ClaI | ATCGAT | 1 cut(s) | 860 |
| CseI | GACGC | 2 cut(s) | 30, 1362 |
| Csp6I | GTAC | 3 cut(s) | 442, 849, 1165 |
| CviQI | GTAC | 3 cut(s) | 442, 849, 1165 |
| DdeI | CTNAG | 4 cut(s) | 309, 681, 1121, 1206 |
| DpnI | GATC | 3 cut(s) | 207, 248, 672 |
| DpnII | GATC | 3 cut(s) | 205, 246, 670 |
| DraI | TTTAAA | 3 cut(s) | 753, 973, 1171 |
| DriI | GACNNNNNGTC | 1 cut(s) | 415 |
| Eam1104I | CTCTTC | 1 cut(s) | 1650 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 415 |
| EarI | CTCTTC | 1 cut(s) | 1650 |
| Eco24I | GRGCYC | 1 cut(s) | 537 |
| Eco47I | GGWCC | 3 cut(s) | 382, 609, 1339 |
| Eco47III | AGCGCT | 1 cut(s) | 1479 |
| Eco57I | CTGAAG | 2 cut(s) | 1287, 1383 |
| Eco88I | CYCGRG | 1 cut(s) | 63 |
| EcoO109I | RGGNCCY | 1 cut(s) | 382 |
| EcoRI | GAATTC | 2 cut(s) | 840, 1194 |
| EcoRII | CCWGG | 1 cut(s) | 1632 |
| EcoT22I | ATGCAT | 2 cut(s) | 6, 1222 |
| EcoT38I | GRGCYC | 1 cut(s) | 537 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 981, 1013 |
| FaqI | GGGAC | 4 cut(s) | 377, 523, 925, 1555 |
| FauI | CCCGC | 1 cut(s) | 1241 |
| FbaI | TGATCA | 2 cut(s) | 205, 670 |
| FblI | GTMKAC | 1 cut(s) | 704 |
| Fnu4HI | GCNGC | 5 cut(s) | 290, 1296, 1329, 1440, 1443 |
| FokI | GGATG | 6 cut(s) | 227, 316, 635, 1061, 1185, 1469 |
| FriOI | GRGCYC | 1 cut(s) | 537 |
| Fsp4HI | GCNGC | 5 cut(s) | 290, 1296, 1329, 1440, 1443 |
| FspBI | CTAG | 6 cut(s) | 192, 453, 779, 845, 1145, 1518 |
| GlaI | GCGC | 2 cut(s) | 1253, 1479 |
| GluI | GCNGC | 5 cut(s) | 290, 1296, 1329, 1440, 1443 |
| HaeII | RGCGCY | 2 cut(s) | 1255, 1481 |
| HapII | CCGG | 2 cut(s) | 252, 1397 |
| HgaI | GACGC | 2 cut(s) | 30, 1362 |
| HhaI | GCGC | 2 cut(s) | 1254, 1480 |
| Hin6I | GCGC | 2 cut(s) | 1252, 1478 |
| HinP1I | GCGC | 2 cut(s) | 1252, 1478 |
| HincII | GTYRAC | 3 cut(s) | 463, 1231, 1674 |
| HindII | GTYRAC | 3 cut(s) | 463, 1231, 1674 |
| HindIII | AAGCTT | 1 cut(s) | 1263 |
| HinfI | GANTC | 5 cut(s) | 11, 517, 813, 857, 1580 |
| HpaII | CCGG | 2 cut(s) | 252, 1397 |
| HphI | GGTGA | 2 cut(s) | 20, 881 |
| Hpy166II | GTNNAC | 6 cut(s) | 179, 444, 463, 705, 1231, 1674 |
| Hpy188I | TCNGA | 9 cut(s) | 130, 210, 522, 675, 881, 1207, 1378, 1585, 1693 |
| Hpy188III | TCNNGA | 7 cut(s) | 65, 166, 391, 500, 950, 1046, 1387 |
| Hpy8I | GTNNAC | 6 cut(s) | 179, 444, 463, 705, 1231, 1674 |
| Hpy99I | CGWCG | 1 cut(s) | 647 |
| HpyAV | CCTTC | 5 cut(s) | 1033, 1076, 1212, 1244, 1311 |
| HpyCH4III | ACNGT | 5 cut(s) | 139, 322, 834, 969, 1183 |
| HpyCH4IV | ACGT | 2 cut(s) | 559, 645 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1304, 1325 |
| HpyF3I | CTNAG | 4 cut(s) | 309, 681, 1121, 1206 |
| HpySE526I | ACGT | 2 cut(s) | 559, 645 |
| HspAI | GCGC | 2 cut(s) | 1252, 1478 |
| Ksp22I | TGATCA | 2 cut(s) | 205, 670 |
| Kzo9I | GATC | 3 cut(s) | 205, 246, 670 |
| LmnI | GCTCC | 4 cut(s) | 660, 736, 775, 1303 |
| Lsp1109I | GCAGC | 5 cut(s) | 301, 1307, 1340, 1426, 1429 |
| LweI | GCATC | 8 cut(s) | 161, 294, 480, 573, 666, 784, 1039, 1275 |
| MaeI | CTAG | 6 cut(s) | 192, 453, 779, 845, 1145, 1518 |
| MaeII | ACGT | 2 cut(s) | 559, 645 |
| MaeIII | GTNAC | 1 cut(s) | 1147 |
| MalI | GATC | 3 cut(s) | 207, 248, 672 |
| MboI | GATC | 3 cut(s) | 205, 246, 670 |
| MboII | GAAGA | 6 cut(s) | 565, 578, 697, 1631, 1667, 1676 |
| MhlI | GDGCHC | 3 cut(s) | 51, 537, 1494 |
| MlyI | GAGTC | 1 cut(s) | 20 |
| MmeI | TCCRAC | 2 cut(s) | 859, 1378 |
| Mph1103I | ATGCAT | 2 cut(s) | 6, 1222 |
| MslI | CAYNNNNRTG | 2 cut(s) | 617, 1347 |
| MspA1I | CMGCKG | 3 cut(s) | 292, 854, 1307 |
| MspCI | CTTAAG | 1 cut(s) | 1613 |
| MspI | CCGG | 2 cut(s) | 252, 1397 |
| MspR9I | CCNGG | 1 cut(s) | 1634 |
| Mva1269I | GAATGC | 1 cut(s) | 1687 |
| MvaI | CCWGG | 1 cut(s) | 1634 |
| MvnI | CGCG | 1 cut(s) | 1373 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1304, 1325 |
| NdeII | GATC | 3 cut(s) | 205, 246, 670 |
| NlaIV | GGNNCC | 3 cut(s) | 383, 738, 1340 |
| NmuCI | GTSAC | 1 cut(s) | 1147 |
| NsiI | ATGCAT | 2 cut(s) | 6, 1222 |
| NspI | RCATGY | 2 cut(s) | 931, 1224 |
| PagI | TCATGA | 1 cut(s) | 165 |
| PciI | ACATGT | 1 cut(s) | 927 |
| PctI | GAATGC | 1 cut(s) | 1687 |
| PfeI | GAWTC | 4 cut(s) | 517, 813, 857, 1580 |
| PkrI | GCNGC | 5 cut(s) | 291, 1297, 1330, 1441, 1444 |
| PleI | GAGTC | 1 cut(s) | 19 |
| PpsI | GAGTC | 1 cut(s) | 19 |
| PpuMI | RGGWCCY | 1 cut(s) | 382 |
| PscI | ACATGT | 1 cut(s) | 927 |
| PshBI | ATTAAT | 1 cut(s) | 96 |
| Psp5II | RGGWCCY | 1 cut(s) | 382 |
| Psp6I | CCWGG | 1 cut(s) | 1632 |
| PspGI | CCWGG | 1 cut(s) | 1632 |
| PspN4I | GGNNCC | 3 cut(s) | 383, 738, 1340 |
| PspPI | GGNCC | 3 cut(s) | 382, 609, 1339 |
| PspPPI | RGGWCCY | 1 cut(s) | 382 |
| PstI | CTGCAG | 1 cut(s) | 1447 |
| PvuII | CAGCTG | 3 cut(s) | 292, 854, 1307 |
| RsaI | GTAC | 3 cut(s) | 443, 850, 1166 |
| RsaNI | GTAC | 3 cut(s) | 442, 849, 1165 |
| RseI | CAYNNNNRTG | 2 cut(s) | 617, 1347 |
| SatI | GCNGC | 5 cut(s) | 290, 1296, 1329, 1440, 1443 |
| Sau3AI | GATC | 3 cut(s) | 205, 246, 670 |
| Sau96I | GGNCC | 3 cut(s) | 382, 609, 1339 |
| SchI | GAGTC | 1 cut(s) | 20 |
| ScrFI | CCNGG | 1 cut(s) | 1634 |
| SduI | GDGCHC | 3 cut(s) | 51, 537, 1494 |
| SfaNI | GCATC | 8 cut(s) | 161, 294, 480, 573, 666, 784, 1039, 1275 |
| SfcI | CTRYAG | 2 cut(s) | 1333, 1443 |
| SinI | GGWCC | 3 cut(s) | 382, 609, 1339 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 617, 1347 |
| SmlI | CTYRAG | 2 cut(s) | 50, 1613 |
| SmoI | CTYRAG | 2 cut(s) | 50, 1613 |
| SsiI | CCGC | 3 cut(s) | 174, 1248, 1371 |
| SspMI | CTAG | 6 cut(s) | 192, 453, 779, 845, 1145, 1518 |
| StyD4I | CCNGG | 1 cut(s) | 1632 |
| TaaI | ACNGT | 5 cut(s) | 139, 322, 834, 969, 1183 |
| TaiI | ACGT | 2 cut(s) | 562, 648 |
| TaqI | TCGA | 3 cut(s) | 242, 390, 860 |
| TfiI | GAWTC | 4 cut(s) | 517, 813, 857, 1580 |
| TscAI | CASTG | 1 cut(s) | 751 |
| TseFI | GTSAC | 1 cut(s) | 1147 |
| TseI | GCWGC | 5 cut(s) | 289, 1295, 1328, 1439, 1442 |
| Tsp45I | GTSAC | 1 cut(s) | 1147 |
| TspDTI | ATGAA | 7 cut(s) | 154, 231, 315, 594, 1088, 1187, 1640 |
| TspGWI | ACGGA | 2 cut(s) | 211, 273 |
| TspRI | CASTG | 1 cut(s) | 751 |
| Vha464I | CTTAAG | 1 cut(s) | 1613 |
| VpaK11BI | GGWCC | 3 cut(s) | 382, 609, 1339 |
| VspI | ATTAAT | 1 cut(s) | 96 |
| XapI | RAATTY | 5 cut(s) | 28, 113, 688, 840, 1194 |
| XceI | RCATGY | 2 cut(s) | 931, 1224 |
| XmiI | GTMKAC | 1 cut(s) | 704 |
| XspI | CTAG | 6 cut(s) | 192, 453, 779, 845, 1145, 1518 |
| Zsp2I | ATGCAT | 2 cut(s) | 6, 1222 |