Prupe.1G112400_v2.0.a1

methyltransferase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0029159
Physical Location & Seq
Reverse (-)
8961800 .. 8962969
1170 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G112400.1

Sequence Viewer

Length: 393 bp
ATGGAGACTCATCCTCAGGCTGAAGACATCGATAGAGTGGCTCATCATATGCAAATCAATAGCGTTTTTCATATAAATCCAGGCCTCTGTTTAAAATGTTGTTCTTATCGCGATCTGGAATCTTCCTCGGCATCTGCAAATAAAGCATGGATTAGTATCAGAAGAGAGTTGCAACCTGCAATGGAACACTGTAAAGCATCAATCGAGATCCTGGAGAAGCTTTATAATCCTAATCACATTGTCATTGGATATGAACTTGTGAAGCTCTCGTCTATTCAGTTATCCTTGGGTGAGTGTGCTGCCGTGGACAGCATAAACCGACCTTGTGATATATTTTCGTGTTATTATGGATCATACATACAAGATTTCCCATACTTTCATTCAATTCCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
SET TPR_8 zf-MYND

Protein Analysis

131

Amino Acids

14.78

Weight (kDa)

5.73

Isoelectric Point (pI)

47.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0029159)

Species Orthologous Gene IDs
prunus_persica Prupe.1G112300_v2.0.a1 Prupe.1G112400_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 225
Acc36I ACCTGC 1 cut(s) 184
AccII CGCG 1 cut(s) 111
AclWI GGATC 2 cut(s) 202, 358
AcuI CTGAAG 1 cut(s) 42
AgsI TTSAA 1 cut(s) 384
AjnI CCWGG 2 cut(s) 79, 210
AluBI AGCT 2 cut(s) 220, 265
AluI AGCT 2 cut(s) 220, 265
AlwI GGATC 2 cut(s) 202, 358
AoxI GGCC 1 cut(s) 82
ApeKI GCWGC 1 cut(s) 299
AsuHPI GGTGA 1 cut(s) 302
AxyI CCTNAGG 1 cut(s) 15
BbsI GAAGAC 1 cut(s) 30
BbvI GCAGC 1 cut(s) 286
BceAI ACGGC 1 cut(s) 287
BciT130I CCWGG 2 cut(s) 81, 212
BfuAI ACCTGC 1 cut(s) 184
BisI GCNGC 1 cut(s) 300
BlsI GCNGC 1 cut(s) 301
Bme1390I CCNGG 2 cut(s) 81, 212
BmrFI CCNGG 2 cut(s) 81, 212
BmsI GCATC 2 cut(s) 140, 206
BpiI GAAGAC 1 cut(s) 30
BpmI CTGGAG 1 cut(s) 233
Bsa29I ATCGAT 1 cut(s) 30
BsaBI GATNNNNATC 1 cut(s) 155
BsaJI CCNNGG 3 cut(s) 126, 285, 303
Bse21I CCTNAGG 1 cut(s) 15
Bse3DI GCAATG 1 cut(s) 186
Bse8I GATNNNNATC 1 cut(s) 155
BseBI CCWGG 2 cut(s) 81, 212
BseCI ATCGAT 1 cut(s) 30
BseDI CCNNGG 3 cut(s) 126, 285, 303
BseGI GGATG 1 cut(s) 10
BseJI GATNNNNATC 1 cut(s) 155
BseMI GCAATG 1 cut(s) 186
BseMII CTCAG 1 cut(s) 29
BseXI GCAGC 1 cut(s) 286
Bsh1236I CGCG 1 cut(s) 111
BshFI GGCC 1 cut(s) 84
BshVI ATCGAT 1 cut(s) 30
BsnI GGCC 1 cut(s) 84
Bsp143I GATC 3 cut(s) 112, 207, 350
Bsp68I TCGCGA 1 cut(s) 111
BspANI GGCC 1 cut(s) 84
BspCNI CTCAG 1 cut(s) 28
BspDI ATCGAT 1 cut(s) 30
BspFNI CGCG 1 cut(s) 111
BspMI ACCTGC 1 cut(s) 184
BspPI GGATC 2 cut(s) 202, 358
BsrDI GCAATG 1 cut(s) 186
BssECI CCNNGG 3 cut(s) 126, 285, 303
BssMI GATC 3 cut(s) 112, 207, 350
BssT1I CCWWGG 1 cut(s) 285
Bst2UI CCWGG 2 cut(s) 81, 212
Bst4CI ACNGT 1 cut(s) 191
Bst6I CTCTTC 1 cut(s) 157
BstDEI CTNAG 1 cut(s) 15
BstDSI CCRYGG 1 cut(s) 303
BstF5I GGATG 1 cut(s) 10
BstFNI CGCG 1 cut(s) 111
BstKTI GATC 3 cut(s) 115, 210, 353
BstMBI GATC 3 cut(s) 112, 207, 350
BstMWI GCNNNNNNNGC 1 cut(s) 143
BstNI CCWGG 2 cut(s) 81, 212
BstSCI CCNGG 2 cut(s) 79, 210
BstUI CGCG 1 cut(s) 111
BstV1I GCAGC 1 cut(s) 286
BstV2I GAAGAC 1 cut(s) 30
BstX2I RGATCY 1 cut(s) 207
BstYI RGATCY 1 cut(s) 207
Bsu15I ATCGAT 1 cut(s) 30
Bsu36I CCTNAGG 1 cut(s) 15
BsuRI GGCC 1 cut(s) 84
BsuTUI ATCGAT 1 cut(s) 30
BtgI CCRYGG 1 cut(s) 303
BtsCI GGATG 1 cut(s) 10
BtsIMutI CAGTG 1 cut(s) 187
BtuMI TCGCGA 1 cut(s) 111
BveI ACCTGC 1 cut(s) 184
ClaI ATCGAT 1 cut(s) 30
CviAII CATG 1 cut(s) 147
CviJI RGCY 5 cut(s) 20, 41, 84, 220, 265
CviKI_1 RGCY 5 cut(s) 20, 41, 84, 220, 265
DdeI CTNAG 1 cut(s) 15
DpnI GATC 3 cut(s) 114, 209, 352
DpnII GATC 3 cut(s) 112, 207, 350
DraI TTTAAA 1 cut(s) 93
Eam1104I CTCTTC 1 cut(s) 157
EarI CTCTTC 1 cut(s) 157
Eco130I CCWWGG 1 cut(s) 285
Eco147I AGGCCT 1 cut(s) 84
Eco57I CTGAAG 1 cut(s) 42
Eco81I CCTNAGG 1 cut(s) 15
EcoRII CCWGG 2 cut(s) 79, 210
EcoT14I CCWWGG 1 cut(s) 285
ErhI CCWWGG 1 cut(s) 285
FaeI CATG 1 cut(s) 150
FatI CATG 1 cut(s) 146
FauNDI CATATG 1 cut(s) 48
Fnu4HI GCNGC 1 cut(s) 300
Fsp4HI GCNGC 1 cut(s) 300
GluI GCNGC 1 cut(s) 300
GsuI CTGGAG 1 cut(s) 233
HaeIII GGCC 1 cut(s) 84
Hin1II CATG 1 cut(s) 150
HindIII AAGCTT 1 cut(s) 218
HinfI GANTC 2 cut(s) 7, 119
HphI GGTGA 1 cut(s) 302
Hpy166II GTNNAC 1 cut(s) 307
Hpy188I TCNGA 1 cut(s) 161
Hpy188III TCNNGA 3 cut(s) 110, 116, 205
Hpy8I GTNNAC 1 cut(s) 307
HpyCH4III ACNGT 1 cut(s) 191
HpyCH4V TGCA 4 cut(s) 52, 137, 172, 179
HpyF10VI GCNNNNNNNGC 1 cut(s) 143
HpyF3I CTNAG 1 cut(s) 15
Hsp92II CATG 1 cut(s) 150
Kzo9I GATC 3 cut(s) 112, 207, 350
LpnPI CCDG 7 cut(s) 2, 66, 93, 101, 189, 197, 224
Lsp1109I GCAGC 1 cut(s) 286
LweI GCATC 2 cut(s) 140, 206
MalI GATC 3 cut(s) 114, 209, 352
MboI GATC 3 cut(s) 112, 207, 350
MboII GAAGA 3 cut(s) 35, 114, 174
MflI RGATCY 1 cut(s) 207
MluCI AATT 1 cut(s) 384
MnlI CCTC 3 cut(s) 24, 95, 136
MseI TTAA 2 cut(s) 92, 391
MspR9I CCNGG 2 cut(s) 81, 212
MvaI CCWGG 2 cut(s) 81, 212
MvnI CGCG 1 cut(s) 111
MwoI GCNNNNNNNGC 1 cut(s) 143
NdeI CATATG 1 cut(s) 48
NdeII GATC 3 cut(s) 112, 207, 350
NlaIII CATG 1 cut(s) 150
NmeAIII GCCGAG 1 cut(s) 107
NruI TCGCGA 1 cut(s) 111
PceI AGGCCT 1 cut(s) 84
PfeI GAWTC 1 cut(s) 119
PfoI TCCNGGA 1 cut(s) 210
PkrI GCNGC 1 cut(s) 301
PsiI TTATAA 1 cut(s) 225
Psp6I CCWGG 2 cut(s) 79, 210
PspGI CCWGG 2 cut(s) 79, 210
PsuI RGATCY 1 cut(s) 207
RruI TCGCGA 1 cut(s) 111
SaqAI TTAA 2 cut(s) 92, 391
SatI GCNGC 1 cut(s) 300
Sau3AI GATC 3 cut(s) 112, 207, 350
ScrFI CCNGG 2 cut(s) 81, 212
SetI ASST 4 cut(s) 178, 222, 267, 325
SfaNI GCATC 2 cut(s) 140, 206
Sse9I AATT 1 cut(s) 384
SseBI AGGCCT 1 cut(s) 84
StuI AGGCCT 1 cut(s) 84
StyD4I CCNGG 2 cut(s) 79, 210
StyI CCWWGG 1 cut(s) 285
TaaI ACNGT 1 cut(s) 191
TaqI TCGA 2 cut(s) 30, 204
TasI AATT 1 cut(s) 384
TfiI GAWTC 1 cut(s) 119
Tru1I TTAA 2 cut(s) 92, 391
Tru9I TTAA 2 cut(s) 92, 391
TscAI CASTG 1 cut(s) 194
TseI GCWGC 1 cut(s) 299
TspDTI ATGAA 3 cut(s) 59, 267, 368
TspRI CASTG 1 cut(s) 194
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.