Prupe.1G174600_v2.0.a1

Belongs to the GRAS family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
14687880 .. 14688787
908 bp
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UTR
Exon/CDS
Intron
Prupe.1G174600.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 219 bp
ATGAGTGATATTGACGACCCTTCTCTTGGATTGAACAAGCTGTTGCAGAGTGGAAGCGGTTCTGATCAGCAAGATTTGGAATTCAGTGCAAGCTGGGGGGAAGAAATCGGGTCTAGGTTTCTGGGTTCGTGGGGATGTGGTTGCAGGCTGGGGTGTGGTATAGTTTGCAGGTGGTGGTGTCATGGGGTAGAGAGAGAGCTGGGTTCTTGGTTTTTTTGA

Protein Analysis

73

Amino Acids

7.96

Weight (kDa)

4.45

Isoelectric Point (pI)

51.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029119)

Species Orthologous Gene IDs
prunus_persica Prupe.1G174600_v2.0.a1 Prupe.3G088800_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 159
Acc36I ACCTGC 1 cut(s) 159
AciI CCGC 1 cut(s) 57
AcsI RAATTY 1 cut(s) 80
AfiI CCNNNNNNNGG 1 cut(s) 26
AgsI TTSAA 1 cut(s) 34
AluBI AGCT 3 cut(s) 40, 93, 199
AluI AGCT 3 cut(s) 40, 93, 199
ApoI RAATTY 1 cut(s) 80
Asp700I GAANNNNTTC 1 cut(s) 58
BclI TGATCA 1 cut(s) 64
BfaI CTAG 1 cut(s) 114
BfuAI ACCTGC 1 cut(s) 159
Bsc4I CCNNNNNNNGG 1 cut(s) 26
BseGI GGATG 1 cut(s) 140
BseLI CCNNNNNNNGG 1 cut(s) 26
BseYI CCCAGC 3 cut(s) 93, 148, 199
BslI CCNNNNNNNGG 1 cut(s) 26
Bsp143I GATC 1 cut(s) 64
BspACI CCGC 1 cut(s) 57
BspMI ACCTGC 1 cut(s) 159
BssMI GATC 1 cut(s) 64
BstC8I GCNNGC 2 cut(s) 91, 146
BstF5I GGATG 1 cut(s) 140
BstKTI GATC 1 cut(s) 67
BstMBI GATC 1 cut(s) 64
BtsCI GGATG 1 cut(s) 140
BtsIMutI CAGTG 1 cut(s) 91
BveI ACCTGC 1 cut(s) 159
Cac8I GCNNGC 2 cut(s) 91, 146
CviAII CATG 1 cut(s) 182
CviJI RGCY 4 cut(s) 40, 93, 148, 199
CviKI_1 RGCY 4 cut(s) 40, 93, 148, 199
DpnI GATC 1 cut(s) 66
DpnII GATC 1 cut(s) 64
EcoRI GAATTC 1 cut(s) 80
FaeI CATG 1 cut(s) 185
FaiI YATR 2 cut(s) 161, 183
FatI CATG 1 cut(s) 181
FbaI TGATCA 1 cut(s) 64
FokI GGATG 1 cut(s) 147
FspBI CTAG 1 cut(s) 114
GsaI CCCAGC 3 cut(s) 97, 152, 203
Hin1II CATG 1 cut(s) 185
Hpy188I TCNGA 1 cut(s) 64
HpyAV CCTTC 1 cut(s) 30
HpyCH4V TGCA 4 cut(s) 46, 89, 144, 168
Hsp92II CATG 1 cut(s) 185
Ksp22I TGATCA 1 cut(s) 64
Kzo9I GATC 1 cut(s) 64
LpnPI CCDG 6 cut(s) 79, 107, 130, 134, 154, 185
MaeI CTAG 1 cut(s) 114
MalI GATC 1 cut(s) 66
MboI GATC 1 cut(s) 64
MboII GAAGA 1 cut(s) 113
MluCI AATT 1 cut(s) 80
MroXI GAANNNNTTC 1 cut(s) 58
NdeII GATC 1 cut(s) 64
NlaIII CATG 1 cut(s) 185
PaqCI CACCTGC 1 cut(s) 159
PdmI GAANNNNTTC 1 cut(s) 58
PspFI CCCAGC 3 cut(s) 93, 148, 199
Sau3AI GATC 1 cut(s) 64
SetI ASST 5 cut(s) 42, 95, 119, 173, 201
Sse9I AATT 1 cut(s) 80
SsiI CCGC 1 cut(s) 57
SspMI CTAG 1 cut(s) 114
TasI AATT 1 cut(s) 80
TscAI CASTG 1 cut(s) 91
TspRI CASTG 1 cut(s) 91
XapI RAATTY 1 cut(s) 80
XmnI GAANNNNTTC 1 cut(s) 58
XspI CTAG 1 cut(s) 114
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.