Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0029069

Physical Location & Seq

Genomic Coordinates Forward (+)

20401604 .. 20401923

Gene Structure 320 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G204300.1_v2.0.a1.CDS.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 249 bp

ATGAGCTGTCAGGCACAGGCTCCGCCGGAGCCCGAGCAGGAGCAAGTTGCTGGCAGAAAAGGCAGAGGGACCATAGAGAAAGGACAGCAGCGCCACCACATGGCTTCGATGACCAGCCGCTTCTCCTCCACCTGTCAAGTTTCCTGTTCGGCCAAACCAGAGACTCTGAACAAGGTGTGTGACATAGTGAAGAAGCAGTTGGCTTTACCCGAAGACACAGCTGTGACCCCAGGCTTCAAAGTTTGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0035335 GO:0036211 GO:0042578 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Y_phosphatase2

Protein Analysis

83

Amino Acids

8.9

Weight (kDa)

8.71

Isoelectric Point (pI)

57.59

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0029069)

Species	Orthologous Gene IDs
prunus_persica	Prupe.1G204300_v2.0.a1 Prupe.5G070300_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	100
AciI	CCGC	2 cut(s)	23, 118
AcoI	YGGCCR	1 cut(s)	150
AfiI	CCNNNNNNNGG	1 cut(s)	100
AgsI	TTSAA	1 cut(s)	238
AjnI	CCWGG	1 cut(s)	229
AjuI	GAANNNNNNNTTGG	2 cut(s)	182, 214
AleI	CACNNNNGTG	1 cut(s)	221
AluBI	AGCT	2 cut(s)	6, 221
AluI	AGCT	2 cut(s)	6, 221
Alw26I	GTCTC	1 cut(s)	155
Ama87I	CYCGRG	1 cut(s)	32
AoxI	GGCC	1 cut(s)	150
ApeKI	GCWGC	1 cut(s)	88
AspLEI	GCGC	1 cut(s)	93
AspS9I	GGNCC	1 cut(s)	69
AvaI	CYCGRG	1 cut(s)	32
AvaII	GGWCC	1 cut(s)	69
BanII	GRGCYC	1 cut(s)	33
BbsI	GAAGAC	1 cut(s)	219
BbvI	GCAGC	1 cut(s)	100
BciT130I	CCWGG	1 cut(s)	231
BcoDI	GTCTC	1 cut(s)	155
BfoI	RGCGCY	1 cut(s)	94
BisI	GCNGC	2 cut(s)	89, 118
BlsI	GCNGC	2 cut(s)	90, 119
Bme1390I	CCNGG	1 cut(s)	231
Bme18I	GGWCC	1 cut(s)	69
BmeT110I	CYCGRG	1 cut(s)	32
BmgT120I	GGNCC	1 cut(s)	69
BmiI	GGNNCC	3 cut(s)	21, 30, 70
BmrFI	CCNGG	1 cut(s)	231
BpiI	GAAGAC	1 cut(s)	219
BsaJI	CCNNGG	1 cut(s)	229
Bsc4I	CCNNNNNNNGG	1 cut(s)	100
BseBI	CCWGG	1 cut(s)	231
BseDI	CCNNGG	1 cut(s)	229
BseLI	CCNNNNNNNGG	1 cut(s)	100
BseRI	GAGGAG	1 cut(s)	115
BseXI	GCAGC	1 cut(s)	100
BshFI	GGCC	1 cut(s)	152
BsiHKCI	CYCGRG	1 cut(s)	32
BsiSI	CCGG	1 cut(s)	26
BslFI	GGGAC	1 cut(s)	82
BslI	CCNNNNNNNGG	1 cut(s)	100
BsmAI	GTCTC	1 cut(s)	155
BsmFI	GGGAC	1 cut(s)	82
BsnI	GGCC	1 cut(s)	152
BsoBI	CYCGRG	1 cut(s)	32
Bsp1286I	GDGCHC	1 cut(s)	33
BspACI	CCGC	2 cut(s)	23, 118
BspANI	GGCC	1 cut(s)	152
BspLI	GGNNCC	3 cut(s)	21, 30, 70
BssECI	CCNNGG	1 cut(s)	229
Bst2UI	CCWGG	1 cut(s)	231
BstC8I	GCNNGC	1 cut(s)	52
BstH2I	RGCGCY	1 cut(s)	94
BstHHI	GCGC	1 cut(s)	93
BstMAI	GTCTC	1 cut(s)	155
BstMWI	GCNNNNNNNGC	1 cut(s)	60
BstNI	CCWGG	1 cut(s)	231
BstSCI	CCNGG	1 cut(s)	229
BstV1I	GCAGC	1 cut(s)	100
BstV2I	GAAGAC	1 cut(s)	219
BsuRI	GGCC	1 cut(s)	152
Cac8I	GCNNGC	1 cut(s)	52
CfoI	GCGC	1 cut(s)	93
Cfr13I	GGNCC	1 cut(s)	69
CviAII	CATG	1 cut(s)	100
CviJI	RGCY	9 cut(s)	6, 20, 31, 104, 117, 152, 203, 221, 234
CviKI_1	RGCY	9 cut(s)	6, 20, 31, 104, 117, 152, 203, 221, 234
EaeI	YGGCCR	1 cut(s)	150
EciI	GGCGGA	1 cut(s)	12
Eco24I	GRGCYC	1 cut(s)	33
Eco47I	GGWCC	1 cut(s)	69
Eco88I	CYCGRG	1 cut(s)	32
EcoRII	CCWGG	1 cut(s)	229
EcoT38I	GRGCYC	1 cut(s)	33
FaeI	CATG	1 cut(s)	103
FaiI	YATR	3 cut(s)	74, 101, 185
FaqI	GGGAC	1 cut(s)	82
FatI	CATG	1 cut(s)	99
Fnu4HI	GCNGC	2 cut(s)	89, 118
FriOI	GRGCYC	1 cut(s)	33
Fsp4HI	GCNGC	2 cut(s)	89, 118
GlaI	GCGC	1 cut(s)	92
GluI	GCNGC	2 cut(s)	89, 118
HaeII	RGCGCY	1 cut(s)	94
HaeIII	GGCC	1 cut(s)	152
HapII	CCGG	1 cut(s)	26
HhaI	GCGC	1 cut(s)	93
Hin1II	CATG	1 cut(s)	103
Hin6I	GCGC	1 cut(s)	91
HinP1I	GCGC	1 cut(s)	91
HinfI	GANTC	1 cut(s)	163
HpaII	CCGG	1 cut(s)	26
Hpy188I	TCNGA	1 cut(s)	168
HpyF10VI	GCNNNNNNNGC	1 cut(s)	60
Hsp92II	CATG	1 cut(s)	103
HspAI	GCGC	1 cut(s)	91
LmnI	GCTCC	3 cut(s)	25, 28, 40
Lsp1109I	GCAGC	1 cut(s)	100
MaeIII	GTNAC	2 cut(s)	179, 223
MboII	GAAGA	2 cut(s)	202, 224
MhlI	GDGCHC	1 cut(s)	33
MlyI	GAGTC	1 cut(s)	157
MnlI	CCTC	2 cut(s)	59, 136
MslI	CAYNNNNRTG	1 cut(s)	221
MspA1I	CMGCKG	1 cut(s)	221
MspI	CCGG	1 cut(s)	26
MspR9I	CCNGG	1 cut(s)	231
MvaI	CCWGG	1 cut(s)	231
MwoI	GCNNNNNNNGC	1 cut(s)	60
NlaIII	CATG	1 cut(s)	103
NlaIV	GGNNCC	3 cut(s)	21, 30, 70
NmuCI	GTSAC	2 cut(s)	179, 223
OliI	CACNNNNGTG	1 cut(s)	221
PflMI	CCANNNNNTGG	1 cut(s)	100
PkrI	GCNGC	2 cut(s)	90, 119
PleI	GAGTC	1 cut(s)	157
PpsI	GAGTC	1 cut(s)	157
Psp6I	CCWGG	1 cut(s)	229
PspGI	CCWGG	1 cut(s)	229
PspN4I	GGNNCC	3 cut(s)	21, 30, 70
PspPI	GGNCC	1 cut(s)	69
PvuII	CAGCTG	1 cut(s)	221
RseI	CAYNNNNRTG	1 cut(s)	221
SatI	GCNGC	2 cut(s)	89, 118
Sau96I	GGNCC	1 cut(s)	69
SchI	GAGTC	1 cut(s)	157
ScrFI	CCNGG	1 cut(s)	231
SduI	GDGCHC	1 cut(s)	33
SetI	ASST	4 cut(s)	8, 134, 177, 223
SinI	GGWCC	1 cut(s)	69
SmiMI	CAYNNNNRTG	1 cut(s)	221
SsiI	CCGC	2 cut(s)	23, 118
StyD4I	CCNGG	1 cut(s)	229
TaqI	TCGA	1 cut(s)	107
TauI	GCSGC	1 cut(s)	120
TseFI	GTSAC	2 cut(s)	179, 223
TseI	GCWGC	1 cut(s)	88
Tsp45I	GTSAC	2 cut(s)	179, 223
Van91I	CCANNNNNTGG	1 cut(s)	100
VpaK11BI	GGWCC	1 cut(s)	69

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.