Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0029069

Physical Location & Seq

Genomic Coordinates Forward (+)

8430773 .. 8431525

Gene Structure 753 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G070300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 384 bp

ATGAGCTGTCAGGCACAGGCTCCGCCGGAGCCCGAGCAGGAGCAAGTTGCTGGCAGAAAAGGCAGAGGGACCATAGAGAAAGGACAGCAGCGCCACCACATGGCTTCGATGACGTCCCACAAAAATCCAGTTCTTAGATCTCGCAGCATCGGTCGGCTTGGTGGGCCGCGTCGATCTGGTTCAGCAGCCGCTTCTCCTCCACCTGTCAAGTTTCCTATCTCTGTAAGAAGAGTTGAACTCGTGGGATGCTTGAGAAAATTGCAGAGGTGGTGCCTGACATCTGTTTTTGATGAATATCAGCGGTTTGCAGCTGCGAAAGCTAGAGTTGCAGATACAAATGATGACAGTGGCGACAGTAGAAAATATGCTGTCGGGCACGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004721 GO:0004725 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019538 GO:0035335 GO:0036211 GO:0042578 GO:0043170 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0071704 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Y_phosphatase2

Protein Analysis

128

Amino Acids

13.92

Weight (kDa)

10.46

Isoelectric Point (pI)

80.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0029069)

Species	Orthologous Gene IDs
prunus_persica	Prupe.1G204300_v2.0.a1 Prupe.5G070300_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	116
AccB1I	GGYRCC	1 cut(s)	270
AccB7I	CCANNNNNTGG	1 cut(s)	100
AccII	CGCG	1 cut(s)	169
AciI	CCGC	4 cut(s)	23, 167, 189, 301
AcyI	GRCGYC	1 cut(s)	113
AfiI	CCNNNNNNNGG	1 cut(s)	100
AgsI	TTSAA	1 cut(s)	236
AluBI	AGCT	3 cut(s)	6, 311, 320
AluI	AGCT	3 cut(s)	6, 311, 320
Ama87I	CYCGRG	1 cut(s)	32
AoxI	GGCC	1 cut(s)	164
ApeKI	GCWGC	5 cut(s)	88, 144, 185, 308, 311
AspLEI	GCGC	1 cut(s)	93
AspS9I	GGNCC	2 cut(s)	69, 164
AvaI	CYCGRG	1 cut(s)	32
AvaII	GGWCC	1 cut(s)	69
BaeGI	GKGCMC	1 cut(s)	378
BanI	GGYRCC	1 cut(s)	270
BanII	GRGCYC	1 cut(s)	33
BauI	CACGAG	1 cut(s)	239
BbvI	GCAGC	5 cut(s)	100, 156, 197, 298, 320
BfaI	CTAG	1 cut(s)	321
BfoI	RGCGCY	1 cut(s)	94
BglII	AGATCT	1 cut(s)	137
BisI	GCNGC	7 cut(s)	89, 145, 167, 186, 189, 309, 312
BlsI	GCNGC	7 cut(s)	90, 146, 168, 187, 190, 310, 313
Bme18I	GGWCC	1 cut(s)	69
BmeT110I	CYCGRG	1 cut(s)	32
BmgT120I	GGNCC	2 cut(s)	69, 164
BmiI	GGNNCC	4 cut(s)	21, 30, 70, 272
BmsI	GCATC	2 cut(s)	156, 236
BplI	GAGNNNNNCTC	2 cut(s)	222, 254
BpuEI	CTTGAG	1 cut(s)	271
BsaBI	GATNNNNATC	1 cut(s)	294
BsaHI	GRCGYC	1 cut(s)	113
Bsc4I	CCNNNNNNNGG	1 cut(s)	100
Bse1I	ACTGG	1 cut(s)	128
Bse8I	GATNNNNATC	1 cut(s)	294
BseGI	GGATG	1 cut(s)	251
BseJI	GATNNNNATC	1 cut(s)	294
BseLI	CCNNNNNNNGG	1 cut(s)	100
BseNI	ACTGG	1 cut(s)	128
BseRI	GAGGAG	1 cut(s)	186
BseSI	GKGCMC	1 cut(s)	378
BseXI	GCAGC	5 cut(s)	100, 156, 197, 298, 320
Bsh1236I	CGCG	1 cut(s)	169
Bsh1285I	CGRYCG	1 cut(s)	154
BshFI	GGCC	1 cut(s)	166
BshNI	GGYRCC	1 cut(s)	270
BsiEI	CGRYCG	1 cut(s)	154
BsiHKCI	CYCGRG	1 cut(s)	32
BsiSI	CCGG	1 cut(s)	26
BslFI	GGGAC	2 cut(s)	82, 100
BslI	CCNNNNNNNGG	1 cut(s)	100
BsmFI	GGGAC	2 cut(s)	82, 100
BsnI	GGCC	1 cut(s)	166
BsoBI	CYCGRG	1 cut(s)	32
Bsp1286I	GDGCHC	2 cut(s)	33, 378
Bsp143I	GATC	2 cut(s)	137, 173
BspACI	CCGC	4 cut(s)	23, 167, 189, 301
BspANI	GGCC	1 cut(s)	166
BspFNI	CGCG	1 cut(s)	169
BspLI	GGNNCC	4 cut(s)	21, 30, 70, 272
BspT107I	GGYRCC	1 cut(s)	270
BsrI	ACTGG	1 cut(s)	128
BssMI	GATC	2 cut(s)	137, 173
BssNI	GRCGYC	1 cut(s)	113
BssSI	CACGAG	1 cut(s)	239
Bst2BI	CACGAG	1 cut(s)	239
Bst4CI	ACNGT	2 cut(s)	347, 356
Bst6I	CTCTTC	1 cut(s)	223
BstACI	GRCGYC	1 cut(s)	113
BstC8I	GCNNGC	2 cut(s)	52, 378
BstDEI	CTNAG	1 cut(s)	134
BstF5I	GGATG	1 cut(s)	251
BstFNI	CGCG	1 cut(s)	169
BstH2I	RGCGCY	1 cut(s)	94
BstHHI	GCGC	1 cut(s)	93
BstKTI	GATC	2 cut(s)	140, 176
BstMBI	GATC	2 cut(s)	137, 173
BstMCI	CGRYCG	1 cut(s)	154
BstMWI	GCNNNNNNNGC	4 cut(s)	60, 163, 317, 326
BstSLI	GKGCMC	1 cut(s)	378
BstUI	CGCG	1 cut(s)	169
BstV1I	GCAGC	5 cut(s)	100, 156, 197, 298, 320
BstX2I	RGATCY	1 cut(s)	137
BstYI	RGATCY	1 cut(s)	137
BsuRI	GGCC	1 cut(s)	166
BtsCI	GGATG	1 cut(s)	251
BtsIMutI	CAGTG	1 cut(s)	352
Cac8I	GCNNGC	2 cut(s)	52, 378
CfoI	GCGC	1 cut(s)	93
Cfr13I	GGNCC	2 cut(s)	69, 164
CseI	GACGC	1 cut(s)	158
CviAII	CATG	2 cut(s)	100, 381
CviJI	RGCY	9 cut(s)	6, 20, 31, 104, 157, 166, 188, 311, 320
CviKI_1	RGCY	9 cut(s)	6, 20, 31, 104, 157, 166, 188, 311, 320
DdeI	CTNAG	1 cut(s)	134
DpnI	GATC	2 cut(s)	139, 175
DpnII	GATC	2 cut(s)	137, 173
Eam1104I	CTCTTC	1 cut(s)	223
EarI	CTCTTC	1 cut(s)	223
EciI	GGCGGA	1 cut(s)	12
Eco24I	GRGCYC	1 cut(s)	33
Eco47I	GGWCC	1 cut(s)	69
Eco88I	CYCGRG	1 cut(s)	32
EcoT38I	GRGCYC	1 cut(s)	33
FaeI	CATG	2 cut(s)	103, 384
FaiI	YATR	4 cut(s)	74, 101, 366, 382
FaqI	GGGAC	2 cut(s)	82, 100
FatI	CATG	2 cut(s)	99, 380
Fnu4HI	GCNGC	7 cut(s)	89, 145, 167, 186, 189, 309, 312
FokI	GGATG	1 cut(s)	258
FriOI	GRGCYC	1 cut(s)	33
Fsp4HI	GCNGC	7 cut(s)	89, 145, 167, 186, 189, 309, 312
FspBI	CTAG	1 cut(s)	321
GlaI	GCGC	1 cut(s)	92
GluI	GCNGC	7 cut(s)	89, 145, 167, 186, 189, 309, 312
HaeII	RGCGCY	1 cut(s)	94
HaeIII	GGCC	1 cut(s)	166
HapII	CCGG	1 cut(s)	26
HgaI	GACGC	1 cut(s)	158
HhaI	GCGC	1 cut(s)	93
Hin1I	GRCGYC	1 cut(s)	113
Hin1II	CATG	2 cut(s)	103, 384
Hin6I	GCGC	1 cut(s)	91
HinP1I	GCGC	1 cut(s)	91
HpaII	CCGG	1 cut(s)	26
Hpy99I	CGWCG	1 cut(s)	174
HpyCH4III	ACNGT	2 cut(s)	347, 356
HpyCH4IV	ACGT	1 cut(s)	113
HpyCH4V	TGCA	3 cut(s)	262, 308, 329
HpyF10VI	GCNNNNNNNGC	4 cut(s)	60, 163, 317, 326
HpyF3I	CTNAG	1 cut(s)	134
HpySE526I	ACGT	1 cut(s)	113
Hsp92I	GRCGYC	1 cut(s)	113
Hsp92II	CATG	2 cut(s)	103, 384
HspAI	GCGC	1 cut(s)	91
Kzo9I	GATC	2 cut(s)	137, 173
LmnI	GCTCC	3 cut(s)	25, 28, 40
LpnPI	CCDG	8 cut(s)	2, 23, 36, 39, 141, 162, 216, 287
Lsp1109I	GCAGC	5 cut(s)	100, 156, 197, 298, 320
LweI	GCATC	2 cut(s)	156, 236
MaeI	CTAG	1 cut(s)	321
MaeII	ACGT	1 cut(s)	113
MalI	GATC	2 cut(s)	139, 175
MboI	GATC	2 cut(s)	137, 173
MboII	GAAGA	1 cut(s)	240
MflI	RGATCY	1 cut(s)	137
MhlI	GDGCHC	2 cut(s)	33, 378
MluCI	AATT	1 cut(s)	257
MnlI	CCTC	3 cut(s)	59, 207, 258
MspA1I	CMGCKG	2 cut(s)	301, 311
MspI	CCGG	1 cut(s)	26
MvnI	CGCG	1 cut(s)	169
MwoI	GCNNNNNNNGC	4 cut(s)	60, 163, 317, 326
NdeII	GATC	2 cut(s)	137, 173
NlaIII	CATG	2 cut(s)	103, 384
NlaIV	GGNNCC	4 cut(s)	21, 30, 70, 272
PflMI	CCANNNNNTGG	1 cut(s)	100
PkrI	GCNGC	7 cut(s)	90, 146, 168, 187, 190, 310, 313
PspN4I	GGNNCC	4 cut(s)	21, 30, 70, 272
PspPI	GGNCC	2 cut(s)	69, 164
PsuI	RGATCY	1 cut(s)	137
PvuII	CAGCTG	1 cut(s)	311
SatI	GCNGC	7 cut(s)	89, 145, 167, 186, 189, 309, 312
Sau3AI	GATC	2 cut(s)	137, 173
Sau96I	GGNCC	2 cut(s)	69, 164
SduI	GDGCHC	2 cut(s)	33, 378
SetI	ASST	6 cut(s)	8, 116, 205, 269, 313, 322
SfaNI	GCATC	2 cut(s)	156, 236
SinI	GGWCC	1 cut(s)	69
SmlI	CTYRAG	1 cut(s)	250
SmoI	CTYRAG	1 cut(s)	250
Sse9I	AATT	1 cut(s)	257
SsiI	CCGC	4 cut(s)	23, 167, 189, 301
SspMI	CTAG	1 cut(s)	321
TaaI	ACNGT	2 cut(s)	347, 356
TaiI	ACGT	1 cut(s)	116
TaqI	TCGA	2 cut(s)	107, 172
TaqII	GACCGA	1 cut(s)	140
TasI	AATT	1 cut(s)	257
TauI	GCSGC	2 cut(s)	169, 191
TscAI	CASTG	1 cut(s)	352
TseI	GCWGC	5 cut(s)	88, 144, 185, 308, 311
TspDTI	ATGAA	1 cut(s)	306
TspRI	CASTG	1 cut(s)	352
Van91I	CCANNNNNTGG	1 cut(s)	100
VpaK11BI	GGWCC	1 cut(s)	69
XspI	CTAG	1 cut(s)	321
ZraI	GACGTC	1 cut(s)	114

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.