Prupe.1G230400_v2.0.a1

BEL1-like homeodomain protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
24367941 .. 24369420
1480 bp
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UTR
Exon/CDS
Intron
Prupe.1G230400.1

Sequence Viewer

Length: 297 bp
ATGGCTACATATTTCCAAAATTTAAGCAACCAAAACTTGTTGAACCCCTCCTATGCAGGGGATGAGAAACTTGCTTCTTATCCTGAACCCCACGCCAAAATGATGATGTATCTGAAACAAGCTTCATATGCTATTGGATCCTACTCTGAAGTCTTGTCCGGCGACTCTTTCTCTCCTCACAAATATGCTGATTCTGATGGTGGCAGGAATGAAATGATATTGTTAGCTTCCAGTAAGTGGTATGAACAGTTGTTATACTGTTCATACCCTACAACTGAGTTGATTTATATGACATAG

Protein Analysis

99

Amino Acids

11.13

Weight (kDa)

4.89

Isoelectric Point (pI)

57.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029164)

Species Orthologous Gene IDs
prunus_persica Prupe.1G230100_v2.0.a1 Prupe.1G230400_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 237
AclWI GGATC 2 cut(s) 132, 145
AcsI RAATTY 1 cut(s) 19
AcuI CTGAAG 1 cut(s) 168
AfiI CCNNNNNNNGG 2 cut(s) 57, 237
AgsI TTSAA 1 cut(s) 43
AluBI AGCT 2 cut(s) 122, 227
AluI AGCT 2 cut(s) 122, 227
AlwI GGATC 2 cut(s) 132, 145
ApoI RAATTY 1 cut(s) 19
BamHI GGATCC 1 cut(s) 137
BccI CCATC 1 cut(s) 191
BmiI GGNNCC 1 cut(s) 139
Bsc4I CCNNNNNNNGG 2 cut(s) 57, 237
Bse1I ACTGG 1 cut(s) 231
BseGI GGATG 1 cut(s) 67
BseLI CCNNNNNNNGG 2 cut(s) 57, 237
BseMII CTCAG 1 cut(s) 267
BseNI ACTGG 1 cut(s) 231
BseRI GAGGAG 1 cut(s) 165
BsiSI CCGG 1 cut(s) 159
BslI CCNNNNNNNGG 2 cut(s) 57, 237
Bsp143I GATC 1 cut(s) 137
BspCNI CTCAG 1 cut(s) 268
BspLI GGNNCC 1 cut(s) 139
BspPI GGATC 2 cut(s) 132, 145
BsrI ACTGG 1 cut(s) 231
BssMI GATC 1 cut(s) 137
Bst4CI ACNGT 2 cut(s) 249, 260
BstDEI CTNAG 1 cut(s) 276
BstF5I GGATG 1 cut(s) 67
BstKTI GATC 1 cut(s) 140
BstMBI GATC 1 cut(s) 137
BstMWI GCNNNNNNNGC 1 cut(s) 128
BstX2I RGATCY 1 cut(s) 137
BstYI RGATCY 1 cut(s) 137
BtsCI GGATG 1 cut(s) 67
CviJI RGCY 3 cut(s) 5, 122, 227
CviKI_1 RGCY 3 cut(s) 5, 122, 227
DdeI CTNAG 1 cut(s) 276
DpnI GATC 1 cut(s) 139
DpnII GATC 1 cut(s) 137
Eco57I CTGAAG 1 cut(s) 168
FauNDI CATATG 1 cut(s) 127
FokI GGATG 1 cut(s) 74
HapII CCGG 1 cut(s) 159
HindIII AAGCTT 1 cut(s) 120
HinfI GANTC 2 cut(s) 164, 191
HpaII CCGG 1 cut(s) 159
Hpy188I TCNGA 3 cut(s) 114, 148, 196
Hpy188III TCNNGA 1 cut(s) 83
HpyCH4III ACNGT 2 cut(s) 249, 260
HpyCH4V TGCA 1 cut(s) 56
HpyF10VI GCNNNNNNNGC 1 cut(s) 128
HpyF3I CTNAG 1 cut(s) 276
Kzo9I GATC 1 cut(s) 137
LpnPI CCDG 5 cut(s) 42, 96, 172, 190, 244
MalI GATC 1 cut(s) 139
MboI GATC 1 cut(s) 137
MflI RGATCY 1 cut(s) 137
MluCI AATT 1 cut(s) 19
MlyI GAGTC 1 cut(s) 158
MnlI CCTC 2 cut(s) 58, 186
MseI TTAA 1 cut(s) 23
MslI CAYNNNNRTG 1 cut(s) 183
MspI CCGG 1 cut(s) 159
MwoI GCNNNNNNNGC 1 cut(s) 128
NdeI CATATG 1 cut(s) 127
NdeII GATC 1 cut(s) 137
NlaIV GGNNCC 1 cut(s) 139
PfeI GAWTC 1 cut(s) 191
PflMI CCANNNNNTGG 1 cut(s) 237
PleI GAGTC 1 cut(s) 158
PpsI GAGTC 1 cut(s) 158
PspN4I GGNNCC 1 cut(s) 139
PsuI RGATCY 1 cut(s) 137
RseI CAYNNNNRTG 1 cut(s) 183
SaqAI TTAA 1 cut(s) 23
Sau3AI GATC 1 cut(s) 137
SchI GAGTC 1 cut(s) 158
SetI ASST 2 cut(s) 124, 229
SmiMI CAYNNNNRTG 1 cut(s) 183
Sse9I AATT 1 cut(s) 19
TaaI ACNGT 2 cut(s) 249, 260
TasI AATT 1 cut(s) 19
TfiI GAWTC 1 cut(s) 191
Tru1I TTAA 1 cut(s) 23
Tru9I TTAA 1 cut(s) 23
TspDTI ATGAA 4 cut(s) 114, 225, 252, 258
Van91I CCANNNNNTGG 1 cut(s) 237
XapI RAATTY 1 cut(s) 19
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.