Prupe.1G318300_v2.0.a1

phosphoglycolate phosphatase activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
30602479 .. 30605150
2672 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G318300.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 345 bp
ATGGACAGCGACGAAGTTGGAGTTGCGGATTACGAGTTCATCGACAACGACTCTGACAATTCCAATGATGTTGCCTCACATCGATACCAGGTTTATGTGATTGGGGAGGAAGGTATCTTGAAGGAGCTTGAGCTTGCTGGATATCAATACCTTGGTGGACCAGAAGACGGTGGGAAGAAGATAGATCTGAAGCCTGGATTTCTGATGGAGCATGATGAGAATGTATACTTCTGTCCTTTCTTGCTTCATAGAACTTTGTTTATTATTGGGTTTGTCCTGATAGAAATACAAGTAGAACTTTCTCTCAATAGAGCTTTTGCATTCCTTTTTGGAACCTTATACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

115

Amino Acids

12.96

Weight (kDa)

4.23

Isoelectric Point (pI)

18.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0028982)

Species Orthologous Gene IDs
prunus_persica Prupe.1G318300_v2.0.a1 Prupe.8G237000_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 225
AciI CCGC 1 cut(s) 26
AcuI CTGAAG 1 cut(s) 209
AfiI CCNNNNNNNGG 1 cut(s) 167
AgsI TTSAA 1 cut(s) 121
AjnI CCWGG 2 cut(s) 87, 193
AloI GAACNNNNNNTCC 2 cut(s) 20, 52
AluBI AGCT 3 cut(s) 127, 133, 314
AluI AGCT 3 cut(s) 127, 133, 314
AspS9I GGNCC 1 cut(s) 158
AvaII GGWCC 1 cut(s) 158
BbsI GAAGAC 1 cut(s) 171
BccI CCATC 1 cut(s) 199
BciT130I CCWGG 2 cut(s) 89, 195
BglII AGATCT 1 cut(s) 184
Bme1390I CCNGG 2 cut(s) 89, 195
Bme18I GGWCC 1 cut(s) 158
BmgT120I GGNCC 1 cut(s) 158
BmiI GGNNCC 1 cut(s) 334
BmrFI CCNGG 2 cut(s) 89, 195
BpiI GAAGAC 1 cut(s) 171
BpuEI CTTGAG 1 cut(s) 149
Bsa29I ATCGAT 1 cut(s) 82
BsaJI CCNNGG 1 cut(s) 151
Bsc4I CCNNNNNNNGG 1 cut(s) 167
BseBI CCWGG 2 cut(s) 89, 195
BseCI ATCGAT 1 cut(s) 82
BseDI CCNNGG 1 cut(s) 151
BseLI CCNNNNNNNGG 1 cut(s) 167
BshVI ATCGAT 1 cut(s) 82
BslI CCNNNNNNNGG 1 cut(s) 167
BsmI GAATGC 1 cut(s) 320
Bsp143I GATC 1 cut(s) 184
BspACI CCGC 1 cut(s) 26
BspDI ATCGAT 1 cut(s) 82
BspLI GGNNCC 1 cut(s) 334
BssECI CCNNGG 1 cut(s) 151
BssMI GATC 1 cut(s) 184
BssNAI GTATAC 1 cut(s) 226
BssT1I CCWWGG 1 cut(s) 151
Bst1107I GTATAC 1 cut(s) 226
Bst2UI CCWGG 2 cut(s) 89, 195
Bst4CI ACNGT 1 cut(s) 170
BstC8I GCNNGC 1 cut(s) 135
BstKTI GATC 1 cut(s) 187
BstMBI GATC 1 cut(s) 184
BstNI CCWGG 2 cut(s) 89, 195
BstSCI CCNGG 2 cut(s) 87, 193
BstV2I GAAGAC 1 cut(s) 171
BstX2I RGATCY 1 cut(s) 184
BstYI RGATCY 1 cut(s) 184
BstZ17I GTATAC 1 cut(s) 226
Bsu15I ATCGAT 1 cut(s) 82
BsuTUI ATCGAT 1 cut(s) 82
Cac8I GCNNGC 1 cut(s) 135
Cfr13I GGNCC 1 cut(s) 158
ClaI ATCGAT 1 cut(s) 82
CsiI ACCWGGT 1 cut(s) 87
CviAII CATG 1 cut(s) 212
CviJI RGCY 4 cut(s) 127, 133, 193, 314
CviKI_1 RGCY 4 cut(s) 127, 133, 193, 314
DpnI GATC 1 cut(s) 186
DpnII GATC 1 cut(s) 184
Eco130I CCWWGG 1 cut(s) 151
Eco32I GATATC 1 cut(s) 143
Eco47I GGWCC 1 cut(s) 158
Eco57I CTGAAG 1 cut(s) 209
EcoRII CCWGG 2 cut(s) 87, 193
EcoRV GATATC 1 cut(s) 143
EcoT14I CCWWGG 1 cut(s) 151
ErhI CCWWGG 1 cut(s) 151
FaeI CATG 1 cut(s) 215
FaiI YATR 5 cut(s) 96, 213, 226, 249, 340
FalI AAGNNNNNCTT 2 cut(s) 282, 314
FatI CATG 1 cut(s) 211
FblI GTMKAC 1 cut(s) 225
Hin1II CATG 1 cut(s) 215
HinfI GANTC 1 cut(s) 50
Hpy166II GTNNAC 2 cut(s) 158, 226
Hpy188I TCNGA 3 cut(s) 55, 189, 204
Hpy188III TCNNGA 2 cut(s) 118, 277
Hpy8I GTNNAC 2 cut(s) 158, 226
Hpy99I CGWCG 1 cut(s) 14
HpyAV CCTTC 2 cut(s) 104, 115
HpyCH4III ACNGT 1 cut(s) 170
HpyCH4V TGCA 1 cut(s) 320
Hsp92II CATG 1 cut(s) 215
Kzo9I GATC 1 cut(s) 184
LmnI GCTCC 2 cut(s) 124, 208
LpnPI CCDG 7 cut(s) 74, 101, 123, 174, 180, 207, 290
MabI ACCWGGT 1 cut(s) 87
MalI GATC 1 cut(s) 186
MboI GATC 1 cut(s) 184
MboII GAAGA 3 cut(s) 176, 187, 190
MflI RGATCY 1 cut(s) 184
MluCI AATT 1 cut(s) 58
MlyI GAGTC 1 cut(s) 44
MnlI CCTC 2 cut(s) 85, 100
MspR9I CCNGG 2 cut(s) 89, 195
Mva1269I GAATGC 1 cut(s) 320
MvaI CCWGG 2 cut(s) 89, 195
NdeII GATC 1 cut(s) 184
NlaIII CATG 1 cut(s) 215
NlaIV GGNNCC 1 cut(s) 334
PcsI WCGNNNNNNNCGW 1 cut(s) 39
PctI GAATGC 1 cut(s) 320
PleI GAGTC 1 cut(s) 44
PpsI GAGTC 1 cut(s) 44
Psp6I CCWGG 2 cut(s) 87, 193
PspGI CCWGG 2 cut(s) 87, 193
PspN4I GGNNCC 1 cut(s) 334
PspPI GGNCC 1 cut(s) 158
PsuI RGATCY 1 cut(s) 184
Sau3AI GATC 1 cut(s) 184
Sau96I GGNCC 1 cut(s) 158
SchI GAGTC 1 cut(s) 44
ScrFI CCNGG 2 cut(s) 89, 195
SetI ASST 7 cut(s) 93, 115, 129, 135, 153, 316, 338
SexAI ACCWGGT 1 cut(s) 87
SinI GGWCC 1 cut(s) 158
SmlI CTYRAG 1 cut(s) 128
SmoI CTYRAG 1 cut(s) 128
Sse9I AATT 1 cut(s) 58
SsiI CCGC 1 cut(s) 26
StyD4I CCNGG 2 cut(s) 87, 193
StyI CCWWGG 1 cut(s) 151
TaaI ACNGT 1 cut(s) 170
TaqI TCGA 2 cut(s) 42, 82
TasI AATT 1 cut(s) 58
TspDTI ATGAA 2 cut(s) 28, 236
VpaK11BI GGWCC 1 cut(s) 158
XmiI GTMKAC 1 cut(s) 225
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.