Prupe.1G327800_v2.0.a1

Ankyrin repeats (many copies)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
31175619 .. 31177049
1431 bp
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UTR
Exon/CDS
Intron
Prupe.1G327800.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 252 bp
ATGGACGCCCTATCTCTTTCCAATCTCTCCGCCGGCGACTTCGCCATGGACGCAGGCCACGAAGAAGCCTACGAAATACCCCTCAATACCGGGATTCAAGCTGAATTGGTACTGGAACGATTGCGTGGAAAAAGAATAAGAATAGGTAAGGATTTTTTTGCCAAGGTAAGGATTTTTTTCGCAACTTTTTTTTGGGTTCCTGTTGATTGCTATAAGGATTTCTCAATTCATGCGATTTTGCACAGAAATTGA

Protein Analysis

84

Amino Acids

9.5

Weight (kDa)

6.26

Isoelectric Point (pI)

19.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024532)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 30
AcyI GRCGYC 1 cut(s) 6
AfaI GTAC 1 cut(s) 111
AfiI CCNNNNNNNGG 1 cut(s) 168
AgsI TTSAA 1 cut(s) 98
AluBI AGCT 1 cut(s) 101
AluI AGCT 1 cut(s) 101
AoxI GGCC 1 cut(s) 55
AsuC2I CCSGG 1 cut(s) 91
BcnI CCSGG 1 cut(s) 91
Bme1390I CCNGG 1 cut(s) 91
BmiI GGNNCC 1 cut(s) 198
BmrFI CCNGG 1 cut(s) 91
BpuMI CCSGG 1 cut(s) 91
BsaHI GRCGYC 1 cut(s) 6
BsaJI CCNNGG 2 cut(s) 45, 162
Bsc4I CCNNNNNNNGG 1 cut(s) 168
Bse118I RCCGGY 1 cut(s) 32
Bse1I ACTGG 1 cut(s) 117
BseDI CCNNGG 2 cut(s) 45, 162
BseLI CCNNNNNNNGG 1 cut(s) 168
BseNI ACTGG 1 cut(s) 117
BshFI GGCC 1 cut(s) 57
BsiSI CCGG 2 cut(s) 33, 90
BslI CCNNNNNNNGG 1 cut(s) 168
BsnI GGCC 1 cut(s) 57
Bsp19I CCATGG 1 cut(s) 45
BspACI CCGC 1 cut(s) 30
BspANI GGCC 1 cut(s) 57
BspLI GGNNCC 1 cut(s) 198
BsrFI RCCGGY 1 cut(s) 32
BsrI ACTGG 1 cut(s) 117
BssAI RCCGGY 1 cut(s) 32
BssECI CCNNGG 2 cut(s) 45, 162
BssNI GRCGYC 1 cut(s) 6
BssT1I CCWWGG 2 cut(s) 45, 162
BstACI GRCGYC 1 cut(s) 6
BstC8I GCNNGC 2 cut(s) 34, 55
BstDSI CCRYGG 1 cut(s) 45
BstMWI GCNNNNNNNGC 1 cut(s) 50
BstSCI CCNGG 1 cut(s) 89
BsuRI GGCC 1 cut(s) 57
BtgI CCRYGG 1 cut(s) 45
Cac8I GCNNGC 2 cut(s) 34, 55
Cfr10I RCCGGY 1 cut(s) 32
CseI GACGC 2 cut(s) 14, 59
Csp6I GTAC 1 cut(s) 110
CviAII CATG 2 cut(s) 46, 230
CviJI RGCY 3 cut(s) 57, 68, 101
CviKI_1 RGCY 3 cut(s) 57, 68, 101
CviQI GTAC 1 cut(s) 110
EciI GGCGGA 1 cut(s) 19
Eco130I CCWWGG 2 cut(s) 45, 162
EcoT14I CCWWGG 2 cut(s) 45, 162
ErhI CCWWGG 2 cut(s) 45, 162
FaeI CATG 2 cut(s) 49, 233
FaiI YATR 3 cut(s) 47, 213, 231
FatI CATG 2 cut(s) 45, 229
HaeIII GGCC 1 cut(s) 57
HapII CCGG 2 cut(s) 33, 90
HgaI GACGC 2 cut(s) 14, 59
Hin1I GRCGYC 1 cut(s) 6
Hin1II CATG 2 cut(s) 49, 233
HinfI GANTC 1 cut(s) 94
HpaII CCGG 2 cut(s) 33, 90
HpyCH4V TGCA 1 cut(s) 241
HpyF10VI GCNNNNNNNGC 1 cut(s) 50
Hsp92I GRCGYC 1 cut(s) 6
Hsp92II CATG 2 cut(s) 49, 233
KroI GCCGGC 1 cut(s) 32
KroNI GCCGGC 1 cut(s) 34
LpnPI CCDG 5 cut(s) 39, 46, 98, 103, 213
MboII GAAGA 1 cut(s) 74
MluCI AATT 3 cut(s) 104, 225, 247
MnlI CCTC 1 cut(s) 92
MreI CGCCGGCG 1 cut(s) 32
MroNI GCCGGC 1 cut(s) 32
MspI CCGG 2 cut(s) 33, 90
MspR9I CCNGG 1 cut(s) 91
MwoI GCNNNNNNNGC 1 cut(s) 50
NaeI GCCGGC 1 cut(s) 34
NciI CCSGG 1 cut(s) 91
NcoI CCATGG 1 cut(s) 45
NgoMIV GCCGGC 1 cut(s) 32
NlaIII CATG 2 cut(s) 49, 233
NlaIV GGNNCC 1 cut(s) 198
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PdiI GCCGGC 1 cut(s) 34
PfeI GAWTC 1 cut(s) 94
PspN4I GGNNCC 1 cut(s) 198
RsaI GTAC 1 cut(s) 111
RsaNI GTAC 1 cut(s) 110
ScrFI CCNGG 1 cut(s) 91
SetI ASST 3 cut(s) 103, 148, 168
SgrAI CRCCGGYG 1 cut(s) 32
Sse9I AATT 3 cut(s) 104, 225, 247
SsiI CCGC 1 cut(s) 30
StyD4I CCNGG 1 cut(s) 89
StyI CCWWGG 2 cut(s) 45, 162
TasI AATT 3 cut(s) 104, 225, 247
TfiI GAWTC 1 cut(s) 94
TspDTI ATGAA 1 cut(s) 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.