Prupe.6G259700_v2.0.a1

Ankyrin repeats (many copies)

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
25065010 .. 25067880
2871 bp
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UTR
Exon/CDS
Intron
Prupe.6G259700.1

Sequence Viewer

Length: 252 bp
ATGGACACCCTATCTCTTTCCAATCTCTCCGCTGGTGACTTCGCCATGGACGCAGGCCACGAAGAAGCCTACGAAATACTCCTCAATACCGGGATTCAAGCTGAATTGGTACTGGAACGATTGCGTGGAAAAAGAATAAGAATGGGTAAGGATTTTTTTGCCAAGGTAAGGATTTTTTTCGCGACTTTTTTTTTGGGTTCTGTTGATTGCTATAAGGATTTCTCAATTCATGCGATTTTGCATAGAAATTGA

Protein Analysis

84

Amino Acids

9.44

Weight (kDa)

6.26

Isoelectric Point (pI)

17.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024532)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 182
AciI CCGC 1 cut(s) 30
AfaI GTAC 1 cut(s) 111
AfiI CCNNNNNNNGG 1 cut(s) 168
AgsI TTSAA 1 cut(s) 98
AluBI AGCT 1 cut(s) 101
AluI AGCT 1 cut(s) 101
AoxI GGCC 1 cut(s) 55
ArsI GACNNNNNNTTYG 2 cut(s) 175, 207
AsuC2I CCSGG 1 cut(s) 91
AsuHPI GGTGA 1 cut(s) 47
BcnI CCSGG 1 cut(s) 91
Bme1390I CCNGG 1 cut(s) 91
BmrFI CCNGG 1 cut(s) 91
BpuMI CCSGG 1 cut(s) 91
BsaJI CCNNGG 2 cut(s) 45, 162
Bsc4I CCNNNNNNNGG 1 cut(s) 168
Bse1I ACTGG 1 cut(s) 117
BseDI CCNNGG 2 cut(s) 45, 162
BseLI CCNNNNNNNGG 1 cut(s) 168
BseNI ACTGG 1 cut(s) 117
BseRI GAGGAG 1 cut(s) 71
Bsh1236I CGCG 1 cut(s) 182
BshFI GGCC 1 cut(s) 57
BsiSI CCGG 1 cut(s) 90
BslI CCNNNNNNNGG 1 cut(s) 168
BsnI GGCC 1 cut(s) 57
Bsp19I CCATGG 1 cut(s) 45
Bsp68I TCGCGA 1 cut(s) 182
BspACI CCGC 1 cut(s) 30
BspANI GGCC 1 cut(s) 57
BspFNI CGCG 1 cut(s) 182
BsrI ACTGG 1 cut(s) 117
BssECI CCNNGG 2 cut(s) 45, 162
BssT1I CCWWGG 2 cut(s) 45, 162
BstC8I GCNNGC 1 cut(s) 55
BstDSI CCRYGG 1 cut(s) 45
BstFNI CGCG 1 cut(s) 182
BstMWI GCNNNNNNNGC 1 cut(s) 50
BstSCI CCNGG 1 cut(s) 89
BstUI CGCG 1 cut(s) 182
BsuRI GGCC 1 cut(s) 57
BtgI CCRYGG 1 cut(s) 45
BtuMI TCGCGA 1 cut(s) 182
Cac8I GCNNGC 1 cut(s) 55
CseI GACGC 1 cut(s) 59
Csp6I GTAC 1 cut(s) 110
CviAII CATG 2 cut(s) 46, 230
CviJI RGCY 3 cut(s) 57, 68, 101
CviKI_1 RGCY 3 cut(s) 57, 68, 101
CviQI GTAC 1 cut(s) 110
Eco130I CCWWGG 2 cut(s) 45, 162
EcoT14I CCWWGG 2 cut(s) 45, 162
ErhI CCWWGG 2 cut(s) 45, 162
FaeI CATG 2 cut(s) 49, 233
FaiI YATR 4 cut(s) 47, 213, 231, 243
FatI CATG 2 cut(s) 45, 229
HaeIII GGCC 1 cut(s) 57
HapII CCGG 1 cut(s) 90
HgaI GACGC 1 cut(s) 59
Hin1II CATG 2 cut(s) 49, 233
HinfI GANTC 1 cut(s) 94
HpaII CCGG 1 cut(s) 90
HphI GGTGA 1 cut(s) 47
Hpy188III TCNNGA 1 cut(s) 181
HpyCH4V TGCA 1 cut(s) 241
HpyF10VI GCNNNNNNNGC 1 cut(s) 50
Hsp92II CATG 2 cut(s) 49, 233
LpnPI CCDG 4 cut(s) 18, 39, 98, 103
MaeIII GTNAC 1 cut(s) 35
MboII GAAGA 1 cut(s) 74
MluCI AATT 3 cut(s) 104, 225, 247
MnlI CCTC 1 cut(s) 92
MspA1I CMGCKG 1 cut(s) 32
MspI CCGG 1 cut(s) 90
MspR9I CCNGG 1 cut(s) 91
MvnI CGCG 1 cut(s) 182
MwoI GCNNNNNNNGC 1 cut(s) 50
NciI CCSGG 1 cut(s) 91
NcoI CCATGG 1 cut(s) 45
NlaIII CATG 2 cut(s) 49, 233
NmuCI GTSAC 1 cut(s) 35
NruI TCGCGA 1 cut(s) 182
PcsI WCGNNNNNNNCGW 1 cut(s) 57
PfeI GAWTC 1 cut(s) 94
RruI TCGCGA 1 cut(s) 182
RsaI GTAC 1 cut(s) 111
RsaNI GTAC 1 cut(s) 110
ScrFI CCNGG 1 cut(s) 91
SetI ASST 2 cut(s) 103, 168
Sse9I AATT 3 cut(s) 104, 225, 247
SsiI CCGC 1 cut(s) 30
StyD4I CCNGG 1 cut(s) 89
StyI CCWWGG 2 cut(s) 45, 162
TasI AATT 3 cut(s) 104, 225, 247
TfiI GAWTC 1 cut(s) 94
TseFI GTSAC 1 cut(s) 35
Tsp45I GTSAC 1 cut(s) 35
TspDTI ATGAA 1 cut(s) 218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.