Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0022507

Physical Location & Seq

Genomic Coordinates Forward (+)

37532722 .. 37534887

Gene Structure 2166 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G442300.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 726 bp

ATGCGCCAGTGGTGGATCTTGAGGGTTTCTTCAAGGGTGATGTTGTGGCAACTGAGAATGCTGCCAAGCTCATTAATTAGGTCATCTTGCTTGAGCCATGGATTTTTCCTAGTGACCAACCATAAGGTCGATGCATATCTCATCCAACTCGCTTATGATCATGTGGATCATCTTTTCAATCTTCCCATCGAGGAGAAAATAAAGGTTGTATATCAAAAGTATAATGAAGCAATGCACGGTTTGGCTCTTTCAATTATGGAACTCTTGGCAATCGGATTGGGAGTGGATCGGATGCTCTACAGAGAGTTCTTCGAAGATGCTGTGTCTGTCATGAGAACCAACTTATATCCAACTTGCCAAGAGCCAAATCTTTCTCTTGGAACGGGACCTCATTGCGATTCTAATGCCCTCACCATTCTTCACCAAGACCTGGTTGGAGGCCTTGATGTGTTTGTCGACAACAAATGGCAGAAGGTTCGGCCTATTCCTGGTGCTCTAGTCATCAACATTGGCGGTGTCTTCGCGGCATTATCGAATGGCATATACAGGAGTAGCTTGCACAGGGCAGTTGTGAACAGCCACAAGGAGAGGAGGTCTTCGGTCTTCTTTATGTGCCCAAGAGCTGACAAGTTGGTGAAGCTCGCAGAGGAACTTGTGCCCACAAGTGAGGGGGCACAAGAAAGTTTCCGGATTTCACATGGTCAGATTTACTCAAAATTATTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0001101 GO:0003006 GO:0003674 GO:0003824 GO:0006082 GO:0006629 GO:0006720 GO:0006721 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0008152 GO:0008299 GO:0008610 GO:0009058 GO:0009314 GO:0009416 GO:0009628 GO:0009639 GO:0009653 GO:0009685 GO:0009686 GO:0009719 GO:0009725 GO:0009739 GO:0009740 GO:0009755 GO:0009791 GO:0009826 GO:0009908 GO:0009987 GO:0010033 GO:0010476 GO:0010817 GO:0016043 GO:0016049 GO:0016053 GO:0016101 GO:0016102 GO:0016114 GO:0016491 GO:0016705 GO:0016706 GO:0019752 GO:0022414 GO:0023052 GO:0032501 GO:0032502 GO:0032870 GO:0032989 GO:0033993 GO:0040007 GO:0042221 GO:0042445 GO:0042446 GO:0043436 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0045544 GO:0046394 GO:0048367 GO:0048589 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051213 GO:0051716 GO:0055114 GO:0060560 GO:0061458 GO:0065007 GO:0065008 GO:0070887 GO:0071229 GO:0071310 GO:0071370 GO:0071396 GO:0071495 GO:0071704 GO:0071840 GO:0080167 GO:0090567 GO:1901576 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

ko00904 ko01100 ko01110 map00904 map01100 map01110

Pfam Domains

Protein Families

2OG-FeII_Oxy DIOX_N

Protein Analysis

242

Amino Acids

27.38

Weight (kDa)

8.66

Isoelectric Point (pI)

40.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0022507)

Species	Orthologous Gene IDs
prunus_persica	Prupe.1G442300_v2.0.a1 Prupe.1G442300_v2.0.a1 Prupe.1G535600_v2.0.a1 Prupe.1G535900_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	430
AccI	GTMKAC	1 cut(s)	456
AccII	CGCG	1 cut(s)	524
AccIII	TCCGGA	1 cut(s)	687
AciI	CCGC	2 cut(s)	513, 524
AclWI	GGATC	3 cut(s)	23, 174, 294
AfiI	CCNNNNNNNGG	2 cut(s)	430, 488
AgsI	TTSAA	3 cut(s)	33, 178, 252
AjnI	CCWGG	2 cut(s)	429, 487
AluBI	AGCT	4 cut(s)	69, 555, 623, 640
AluI	AGCT	4 cut(s)	69, 555, 623, 640
Alw21I	GWGCWC	1 cut(s)	496
AlwI	GGATC	3 cut(s)	23, 174, 294
Aor13HI	TCCGGA	1 cut(s)	687
AoxI	GGCC	2 cut(s)	439, 479
ApeKI	GCWGC	1 cut(s)	61
AseI	ATTAAT	1 cut(s)	74
AspLEI	GCGC	1 cut(s)	6
AspS9I	GGNCC	1 cut(s)	386
AsuHPI	GGTGA	4 cut(s)	49, 403, 413, 646
AsuII	TTCGAA	1 cut(s)	312
AvaII	GGWCC	1 cut(s)	386
BaeGI	GKGCMC	3 cut(s)	617, 660, 676
BbsI	GAAGAC	3 cut(s)	511, 588, 595
Bbv12I	GWGCWC	1 cut(s)	496
BbvI	GCAGC	1 cut(s)	48
BccI	CCATC	1 cut(s)	194
BcgI	CGANNNNNNTGC	4 cut(s)	386, 420, 458, 492
BciT130I	CCWGG	2 cut(s)	431, 489
BclI	TGATCA	1 cut(s)	157
BfaI	CTAG	2 cut(s)	110, 497
BfmI	CTRYAG	1 cut(s)	298
BisI	GCNGC	2 cut(s)	62, 525
BlsI	GCNGC	2 cut(s)	63, 526
Bme1390I	CCNGG	2 cut(s)	431, 489
Bme18I	GGWCC	1 cut(s)	386
BmgT120I	GGNCC	1 cut(s)	386
BmiI	GGNNCC	1 cut(s)	387
BmrFI	CCNGG	2 cut(s)	431, 489
BmsI	GCATC	3 cut(s)	121, 282, 307
BpiI	GAAGAC	3 cut(s)	511, 588, 595
Bpu14I	TTCGAA	1 cut(s)	312
BpuEI	CTTGAG	2 cut(s)	40, 112
BsaBI	GATNNNNATC	1 cut(s)	135
BsaJI	CCNNGG	1 cut(s)	97
BsaWI	WCCGGW	1 cut(s)	687
BsaXI	ACNNNNNCTCC	2 cut(s)	578, 608
Bsc4I	CCNNNNNNNGG	2 cut(s)	430, 488
Bse1I	ACTGG	1 cut(s)	7
Bse3DI	GCAATG	2 cut(s)	237, 391
Bse8I	GATNNNNATC	1 cut(s)	135
BseAI	TCCGGA	1 cut(s)	687
BseBI	CCWGG	2 cut(s)	431, 489
BseDI	CCNNGG	1 cut(s)	97
BseGI	GGATG	2 cut(s)	141, 297
BseJI	GATNNNNATC	1 cut(s)	135
BseLI	CCNNNNNNNGG	2 cut(s)	430, 488
BseMI	GCAATG	2 cut(s)	237, 391
BseMII	CTCAG	1 cut(s)	44
BseNI	ACTGG	1 cut(s)	7
BseRI	GAGGAG	2 cut(s)	206, 604
BseSI	GKGCMC	3 cut(s)	617, 660, 676
BseXI	GCAGC	1 cut(s)	48
Bsh1236I	CGCG	1 cut(s)	524
BshFI	GGCC	2 cut(s)	441, 481
BsiHKAI	GWGCWC	1 cut(s)	496
BsiSI	CCGG	1 cut(s)	688
BslFI	GGGAC	1 cut(s)	399
BslI	CCNNNNNNNGG	2 cut(s)	430, 488
BsmFI	GGGAC	1 cut(s)	399
BsmI	GAATGC	1 cut(s)	63
BsnI	GGCC	2 cut(s)	441, 481
Bsp119I	TTCGAA	1 cut(s)	312
Bsp1286I	GDGCHC	4 cut(s)	496, 617, 660, 676
Bsp13I	TCCGGA	1 cut(s)	687
Bsp143I	GATC	4 cut(s)	15, 157, 166, 286
Bsp19I	CCATGG	1 cut(s)	97
BspACI	CCGC	2 cut(s)	513, 524
BspANI	GGCC	2 cut(s)	441, 481
BspCNI	CTCAG	1 cut(s)	45
BspEI	TCCGGA	1 cut(s)	687
BspFNI	CGCG	1 cut(s)	524
BspHI	TCATGA	1 cut(s)	330
BspLI	GGNNCC	1 cut(s)	387
BspPI	GGATC	3 cut(s)	23, 174, 294
BspT104I	TTCGAA	1 cut(s)	312
BsrDI	GCAATG	2 cut(s)	237, 391
BsrI	ACTGG	1 cut(s)	7
BssECI	CCNNGG	1 cut(s)	97
BssMI	GATC	4 cut(s)	15, 157, 166, 286
BssT1I	CCWWGG	1 cut(s)	97
Bst2UI	CCWGG	2 cut(s)	431, 489
Bst4CI	ACNGT	1 cut(s)	239
BstBI	TTCGAA	1 cut(s)	312
BstC8I	GCNNGC	2 cut(s)	557, 642
BstDEI	CTNAG	1 cut(s)	53
BstDSI	CCRYGG	1 cut(s)	97
BstF5I	GGATG	2 cut(s)	141, 297
BstFNI	CGCG	1 cut(s)	524
BstHHI	GCGC	1 cut(s)	6
BstKTI	GATC	4 cut(s)	18, 160, 169, 289
BstMBI	GATC	4 cut(s)	15, 157, 166, 286
BstNI	CCWGG	2 cut(s)	431, 489
BstSCI	CCNGG	2 cut(s)	429, 487
BstSFI	CTRYAG	1 cut(s)	298
BstSLI	GKGCMC	3 cut(s)	617, 660, 676
BstUI	CGCG	1 cut(s)	524
BstV1I	GCAGC	1 cut(s)	48
BstV2I	GAAGAC	3 cut(s)	511, 588, 595
BstX2I	RGATCY	1 cut(s)	15
BstYI	RGATCY	1 cut(s)	15
BsuRI	GGCC	2 cut(s)	441, 481
BtgI	CCRYGG	1 cut(s)	97
BtsCI	GGATG	2 cut(s)	141, 297
BtsIMutI	CAGTG	1 cut(s)	14
Cac8I	GCNNGC	2 cut(s)	557, 642
CciI	TCATGA	1 cut(s)	330
CfoI	GCGC	1 cut(s)	6
Cfr13I	GGNCC	1 cut(s)	386
CsiI	ACCWGGT	1 cut(s)	429
CviAII	CATG	4 cut(s)	98, 161, 331, 698
DdeI	CTNAG	1 cut(s)	53
DpnI	GATC	4 cut(s)	17, 159, 168, 288
DpnII	GATC	4 cut(s)	15, 157, 166, 286
Eco130I	CCWWGG	1 cut(s)	97
Eco147I	AGGCCT	1 cut(s)	441
Eco47I	GGWCC	1 cut(s)	386
EcoO109I	RGGNCCY	1 cut(s)	386
EcoRII	CCWGG	2 cut(s)	429, 487
EcoT14I	CCWWGG	1 cut(s)	97
EcoT22I	ATGCAT	1 cut(s)	136
ErhI	CCWWGG	1 cut(s)	97
FaeI	CATG	4 cut(s)	101, 164, 334, 701
FaqI	GGGAC	1 cut(s)	399
FatI	CATG	4 cut(s)	97, 160, 330, 697
FbaI	TGATCA	1 cut(s)	157
FblI	GTMKAC	1 cut(s)	456
Fnu4HI	GCNGC	2 cut(s)	62, 525
FokI	GGATG	2 cut(s)	128, 304
Fsp4HI	GCNGC	2 cut(s)	62, 525
FspBI	CTAG	2 cut(s)	110, 497
GlaI	GCGC	1 cut(s)	5
GluI	GCNGC	2 cut(s)	62, 525
HaeIII	GGCC	2 cut(s)	441, 481
HapII	CCGG	1 cut(s)	688
HhaI	GCGC	1 cut(s)	6
Hin1II	CATG	4 cut(s)	101, 164, 334, 701
Hin6I	GCGC	1 cut(s)	4
HinP1I	GCGC	1 cut(s)	4
HincII	GTYRAC	1 cut(s)	457
HindII	GTYRAC	1 cut(s)	457
HinfI	GANTC	1 cut(s)	398
HpaII	CCGG	1 cut(s)	688
HphI	GGTGA	4 cut(s)	49, 403, 413, 646
Hpy166II	GTNNAC	2 cut(s)	457, 574
Hpy188I	TCNGA	3 cut(s)	275, 291, 705
Hpy188III	TCNNGA	3 cut(s)	19, 331, 688
Hpy8I	GTNNAC	2 cut(s)	457, 574
HpyAV	CCTTC	1 cut(s)	466
HpyCH4III	ACNGT	1 cut(s)	239
HpyCH4V	TGCA	3 cut(s)	134, 235, 559
HpyF3I	CTNAG	1 cut(s)	53
Hsp92II	CATG	4 cut(s)	101, 164, 334, 701
HspAI	GCGC	1 cut(s)	4
Kpn2I	TCCGGA	1 cut(s)	687
Ksp22I	TGATCA	1 cut(s)	157
Kzo9I	GATC	4 cut(s)	15, 157, 166, 286
LpnPI	CCDG	8 cut(s)	20, 416, 443, 474, 501, 532, 547, 701
Lsp1109I	GCAGC	1 cut(s)	48
LweI	GCATC	3 cut(s)	121, 282, 307
MabI	ACCWGGT	1 cut(s)	429
MaeI	CTAG	2 cut(s)	110, 497
MaeIII	GTNAC	1 cut(s)	112
MalI	GATC	4 cut(s)	17, 159, 168, 288
MboI	GATC	4 cut(s)	15, 157, 166, 286
MboII	GAAGA	8 cut(s)	21, 173, 301, 326, 410, 511, 588, 595
MflI	RGATCY	1 cut(s)	15
MhlI	GDGCHC	4 cut(s)	496, 617, 660, 676
MluCI	AATT	3 cut(s)	75, 252, 716
MmeI	TCCRAC	3 cut(s)	169, 374, 415
MnlI	CCTC	9 cut(s)	15, 184, 399, 419, 431, 582, 585, 640, 661
Mph1103I	ATGCAT	1 cut(s)	136
MroI	TCCGGA	1 cut(s)	687
MseI	TTAA	1 cut(s)	74
MspI	CCGG	1 cut(s)	688
MspR9I	CCNGG	2 cut(s)	431, 489
Mva1269I	GAATGC	1 cut(s)	63
MvaI	CCWGG	2 cut(s)	431, 489
MvnI	CGCG	1 cut(s)	524
NcoI	CCATGG	1 cut(s)	97
NdeII	GATC	4 cut(s)	15, 157, 166, 286
NlaIII	CATG	4 cut(s)	101, 164, 334, 701
NlaIV	GGNNCC	1 cut(s)	387
NmuCI	GTSAC	1 cut(s)	112
NsiI	ATGCAT	1 cut(s)	136
NspV	TTCGAA	1 cut(s)	312
PagI	TCATGA	1 cut(s)	330
PceI	AGGCCT	1 cut(s)	441
PctI	GAATGC	1 cut(s)	63
PfeI	GAWTC	1 cut(s)	398
PflMI	CCANNNNNTGG	1 cut(s)	430
PkrI	GCNGC	2 cut(s)	63, 526
PpuMI	RGGWCCY	1 cut(s)	386
PshBI	ATTAAT	1 cut(s)	74
Psp5II	RGGWCCY	1 cut(s)	386
Psp6I	CCWGG	2 cut(s)	429, 487
PspGI	CCWGG	2 cut(s)	429, 487
PspN4I	GGNNCC	1 cut(s)	387
PspPI	GGNCC	1 cut(s)	386
PspPPI	RGGWCCY	1 cut(s)	386
PsuI	RGATCY	1 cut(s)	15
SalI	GTCGAC	1 cut(s)	455
SaqAI	TTAA	1 cut(s)	74
SatI	GCNGC	2 cut(s)	62, 525
Sau3AI	GATC	4 cut(s)	15, 157, 166, 286
Sau96I	GGNCC	1 cut(s)	386
ScrFI	CCNGG	2 cut(s)	431, 489
SduI	GDGCHC	4 cut(s)	496, 617, 660, 676
SexAI	ACCWGGT	1 cut(s)	429
SfaNI	GCATC	3 cut(s)	121, 282, 307
SfcI	CTRYAG	1 cut(s)	298
SfuI	TTCGAA	1 cut(s)	312
SinI	GGWCC	1 cut(s)	386
SmlI	CTYRAG	2 cut(s)	19, 91
SmoI	CTYRAG	2 cut(s)	19, 91
Sse9I	AATT	3 cut(s)	75, 252, 716
SseBI	AGGCCT	1 cut(s)	441
SsiI	CCGC	2 cut(s)	513, 524
SspMI	CTAG	2 cut(s)	110, 497
StuI	AGGCCT	1 cut(s)	441
StyD4I	CCNGG	2 cut(s)	429, 487
StyI	CCWWGG	1 cut(s)	97
TaaI	ACNGT	1 cut(s)	239
TaqI	TCGA	5 cut(s)	129, 189, 312, 456, 533
TaqII	GACCGA	1 cut(s)	589
TasI	AATT	3 cut(s)	75, 252, 716
TauI	GCSGC	1 cut(s)	527
TfiI	GAWTC	1 cut(s)	398
Tru1I	TTAA	1 cut(s)	74
Tru9I	TTAA	1 cut(s)	74
TscAI	CASTG	1 cut(s)	14
TseFI	GTSAC	1 cut(s)	112
TseI	GCWGC	1 cut(s)	61
Tsp45I	GTSAC	1 cut(s)	112
TspDTI	ATGAA	1 cut(s)	240
TspRI	CASTG	1 cut(s)	14
Van91I	CCANNNNNTGG	1 cut(s)	430
VpaK11BI	GGWCC	1 cut(s)	386
VspI	ATTAAT	1 cut(s)	74
XcmI	CCANNNNNNNNNTGG	1 cut(s)	431
XmiI	GTMKAC	1 cut(s)	456
XspI	CTAG	2 cut(s)	110, 497
Zsp2I	ATGCAT	1 cut(s)	136

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.