Prupe.2G030000_v2.0.a1

LURP-one-related 6-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
3198404 .. 3199000
597 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G030000.1

Sequence Viewer

Length: 372 bp
ATGGCTTTTTATCACAAAACGTCCTTGACTTTTGCGAAATTATCAGATTGCATTCTTAAAGATATAATTGTCAAATCAATCCAAAATTATAAAATATATATAATTGGTTTTCTTAAATTGGTTTTCTGTTTGAAAGAGCCAAACTCTTGTTTGGCAAGAACTCATGCAATCAGAATCTCCACCGAGGCTAGGCAAAACAAAGACTGGGACTTTGAGATCAAGGGATGTTTTTCTGATATAGGGGTAAAGAAGGAGTTGATGGCAAGCAAGGATCTCTACCATGTTGTGGTGACACCAGACATGGATCAAGCTTTTGTTATTGGGGTCATTACCATTCTTGATTACATATATGTTGAATCCACTAGGTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

124

Amino Acids

14.15

Weight (kDa)

8.25

Isoelectric Point (pI)

29.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028959)

Species Orthologous Gene IDs
prunus_persica Prupe.1G024700_v2.0.a1 Prupe.2G030000_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 90
AccB7I CCANNNNNTGG 1 cut(s) 286
AclWI GGATC 2 cut(s) 279, 312
AdeI CACNNNGTG 1 cut(s) 366
AfiI CCNNNNNNNGG 2 cut(s) 189, 286
AgsI TTSAA 2 cut(s) 133, 356
AluBI AGCT 1 cut(s) 311
AluI AGCT 1 cut(s) 311
AlwI GGATC 2 cut(s) 279, 312
ArsI GACNNNNNNTTYG 2 cut(s) 194, 226
AsuHPI GGTGA 1 cut(s) 301
BccI CCATC 1 cut(s) 253
BfaI CTAG 3 cut(s) 189, 363, 370
BmrI ACTGGG 1 cut(s) 214
BmuI ACTGGG 1 cut(s) 214
BplI GAGNNNNNCTC 2 cut(s) 128, 160
BsaJI CCNNGG 1 cut(s) 183
Bsc4I CCNNNNNNNGG 2 cut(s) 189, 286
Bse1I ACTGG 1 cut(s) 209
BseDI CCNNGG 1 cut(s) 183
BseGI GGATG 1 cut(s) 230
BseLI CCNNNNNNNGG 2 cut(s) 189, 286
BseNI ACTGG 1 cut(s) 209
BslFI GGGAC 1 cut(s) 221
BslI CCNNNNNNNGG 2 cut(s) 189, 286
BsmFI GGGAC 1 cut(s) 221
BsmI GAATGC 1 cut(s) 51
Bsp143I GATC 3 cut(s) 216, 271, 304
BspPI GGATC 2 cut(s) 279, 312
BsrI ACTGG 1 cut(s) 209
BssECI CCNNGG 1 cut(s) 183
BssMI GATC 3 cut(s) 216, 271, 304
BstC8I GCNNGC 1 cut(s) 265
BstF5I GGATG 1 cut(s) 230
BstKTI GATC 3 cut(s) 219, 274, 307
BstMBI GATC 3 cut(s) 216, 271, 304
BstX2I RGATCY 1 cut(s) 271
BstYI RGATCY 1 cut(s) 271
BtsCI GGATG 1 cut(s) 230
Cac8I GCNNGC 1 cut(s) 265
CviAII CATG 3 cut(s) 164, 281, 301
CviJI RGCY 4 cut(s) 5, 139, 188, 311
CviKI_1 RGCY 4 cut(s) 5, 139, 188, 311
DpnI GATC 3 cut(s) 218, 273, 306
DpnII GATC 3 cut(s) 216, 271, 304
DraIII CACNNNGTG 1 cut(s) 366
FaeI CATG 3 cut(s) 167, 284, 304
FaqI GGGAC 1 cut(s) 221
FatI CATG 3 cut(s) 163, 280, 300
FokI GGATG 1 cut(s) 237
FspBI CTAG 3 cut(s) 189, 363, 370
Hin1II CATG 3 cut(s) 167, 284, 304
HindIII AAGCTT 1 cut(s) 309
HinfI GANTC 2 cut(s) 174, 356
HphI GGTGA 1 cut(s) 301
Hpy188I TCNGA 3 cut(s) 46, 173, 235
Hpy188III TCNNGA 1 cut(s) 338
HpyAV CCTTC 1 cut(s) 244
HpyCH4IV ACGT 1 cut(s) 20
HpyCH4V TGCA 2 cut(s) 51, 167
HpySE526I ACGT 1 cut(s) 20
Hsp92II CATG 3 cut(s) 167, 284, 304
Kzo9I GATC 3 cut(s) 216, 271, 304
LpnPI CCDG 2 cut(s) 190, 309
MaeI CTAG 3 cut(s) 189, 363, 370
MaeII ACGT 1 cut(s) 20
MaeIII GTNAC 1 cut(s) 289
MalI GATC 3 cut(s) 218, 273, 306
MboI GATC 3 cut(s) 216, 271, 304
MflI RGATCY 1 cut(s) 271
MluCI AATT 5 cut(s) 38, 66, 85, 102, 116
MnlI CCTC 1 cut(s) 178
MseI TTAA 2 cut(s) 57, 114
Mva1269I GAATGC 1 cut(s) 51
NdeII GATC 3 cut(s) 216, 271, 304
NlaIII CATG 3 cut(s) 167, 284, 304
NmuCI GTSAC 1 cut(s) 289
PctI GAATGC 1 cut(s) 51
PfeI GAWTC 2 cut(s) 174, 356
PflMI CCANNNNNTGG 1 cut(s) 286
PsiI TTATAA 1 cut(s) 90
PsuI RGATCY 1 cut(s) 271
SaqAI TTAA 2 cut(s) 57, 114
Sau3AI GATC 3 cut(s) 216, 271, 304
SetI ASST 3 cut(s) 23, 313, 368
Sse9I AATT 5 cut(s) 38, 66, 85, 102, 116
SspMI CTAG 3 cut(s) 189, 363, 370
TaiI ACGT 1 cut(s) 23
TasI AATT 5 cut(s) 38, 66, 85, 102, 116
TfiI GAWTC 2 cut(s) 174, 356
Tru1I TTAA 2 cut(s) 57, 114
Tru9I TTAA 2 cut(s) 57, 114
TseFI GTSAC 1 cut(s) 289
Tsp45I GTSAC 1 cut(s) 289
Van91I CCANNNNNTGG 1 cut(s) 286
XspI CTAG 3 cut(s) 189, 363, 370
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.