Prupe.2G201600_v2.0.a1
NAC Family

(NAC) domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0022445
Physical Location & Seq
Reverse (-)
23817016 .. 23820462
3447 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G201600.2

Sequence Viewer

Length: 972 bp
ATGGGCAGCGGCGGCGGCACAACAGATGAAAGGGTTTCAGTGCCGATGGGCCTATTACCCGGAATTAAATTCTCTCCCACCGACAAGGAACTGCTTTCCTTTTACTTGAAGAAGAAAATAGCAGGCGAGGACTCAGAATTCAGCAACATCATGCCTGAAATCAATTTGAGAGAGCACGAGCCTCGTGATCTGCCAACTGAGTTCTTCTTCAGCGAACCTGATTACATGTCCCCCAACGGCGATAGTTGCTACAGGACCACGAATCGGGGCTTTTATAAAAGCACAGGCAAGCCTCGTGGGATCGAGGATGAACTATCCAAAGCTGTGATTGGCGAGAAGAGATATATGCCTTTCTACGAAGGTCGTGCGCCCGAACACAAGCTGACCGAGTACGTCCTGCATCAGTTTTCTCTCACCAAAACTGAACTCGCCAAACTGGCTCCTAATCGGGAGTTTGTTCTAAACCACCTAACAATTAAGAAGGGTTCAACTAAGGCGCGTAACCCTAAACCCAATTATAAGAAGCGGAAGTATGATTCAAACTGCGATAAATTAGCTGAACGTGGTATTCCTGGCTACATCGCCTCCAATTATAAAGATGATCAAGCTGCTGCTGCTGCTAATATGATTCCAGAGCCTGAAGAGCATCTCGCAGTCGAAGATGTTCTGCTTGGCAGTGAGAATCGAAATGAATGTGCCGAGTCAGAGTCTGCAAATGGTTCTCGTCTTATAAACAATAATGATAGTTCAACCCTTGCTGTTGGTTCACCTGGCGGCTGCTTCCCATCTGGTTATGGTAATGTAGCTGCGAATGATCCTTTTCGTGAGGTTTCCTTTCAGCCAGAAGGAAATCTGATATCACCCTTTCATCCATCTAGCCTACGGGATATTCCTCTGAGGTCACCAGTGCACACAGGACTACTGGAAGATGTTGTGTGTGTCAATAACTCTATCCTTATTGGCATGCAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
NAM

Protein Analysis

324

Amino Acids

35.73

Weight (kDa)

5.63

Isoelectric Point (pI)

53.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0022445)

Species Orthologous Gene IDs
prunus_persica Prupe.2G201600_v2.0.a1 Prupe.2G201600_v2.0.a1 Prupe.2G201600_v2.0.a1 Prupe.2G201600_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 276, 519, 594, 731
AccII CGCG 1 cut(s) 499
AciI CCGC 5 cut(s) 9, 12, 15, 526, 774
AclWI GGATC 2 cut(s) 308, 809
AcsI RAATTY 2 cut(s) 68, 137
AcuI CTGAAG 2 cut(s) 193, 660
AfaI GTAC 1 cut(s) 392
AfiI CCNNNNNNNGG 1 cut(s) 264
AflIII ACRYGT 1 cut(s) 225
AgsI TTSAA 4 cut(s) 109, 489, 540, 750
AjnI CCWGG 2 cut(s) 571, 769
AluBI AGCT 5 cut(s) 323, 382, 557, 608, 806
AluI AGCT 5 cut(s) 323, 382, 557, 608, 806
Alw21I GWGCWC 2 cut(s) 177, 912
Alw44I GTGCAC 1 cut(s) 908
AlwI GGATC 2 cut(s) 308, 809
AlwNI CAGNNNCTG 2 cut(s) 638, 710
AoxI GGCC 1 cut(s) 49
ApaLI GTGCAC 1 cut(s) 908
ApeKI GCWGC 7 cut(s) 6, 608, 611, 614, 617, 777, 806
ApoI RAATTY 2 cut(s) 68, 137
Asp700I GAANNNNTTC 1 cut(s) 663
AspLEI GCGC 2 cut(s) 370, 499
AspS9I GGNCC 2 cut(s) 49, 255
AsuC2I CCSGG 1 cut(s) 60
AsuHPI GGTGA 4 cut(s) 406, 759, 852, 894
AvaII GGWCC 1 cut(s) 255
BaeGI GKGCMC 1 cut(s) 912
BauI CACGAG 3 cut(s) 176, 183, 294
Bbv12I GWGCWC 2 cut(s) 177, 912
BbvI GCAGC 7 cut(s) 18, 595, 598, 601, 604, 764, 793
BccI CCATC 3 cut(s) 40, 793, 880
BceAI ACGGC 1 cut(s) 253
BcgI CGANNNNNNTGC 4 cut(s) 164, 198, 347, 381
BciT130I CCWGG 2 cut(s) 573, 771
BclI TGATCA 1 cut(s) 601
BcnI CCSGG 1 cut(s) 60
BfaI CTAG 1 cut(s) 876
BfmI CTRYAG 1 cut(s) 250
BglI GCCNNNNNGGC 1 cut(s) 437
Bme1390I CCNGG 3 cut(s) 60, 573, 771
Bme18I GGWCC 1 cut(s) 255
BmgT120I GGNCC 2 cut(s) 49, 255
BmiI GGNNCC 1 cut(s) 441
BmrFI CCNGG 3 cut(s) 60, 573, 771
BmsI GCATC 2 cut(s) 409, 655
BpuMI CCSGG 1 cut(s) 60
BsaXI ACNNNNNCTCC 2 cut(s) 569, 599
Bsc4I CCNNNNNNNGG 1 cut(s) 264
Bse1I ACTGG 3 cut(s) 441, 905, 927
BseBI CCWGG 2 cut(s) 573, 771
BseGI GGATG 2 cut(s) 313, 868
BseLI CCNNNNNNNGG 1 cut(s) 264
BseMII CTCAG 3 cut(s) 147, 189, 887
BseNI ACTGG 3 cut(s) 441, 905, 927
BseSI GKGCMC 1 cut(s) 912
BseXI GCAGC 7 cut(s) 18, 595, 598, 601, 604, 764, 793
Bsh1236I CGCG 1 cut(s) 499
BshFI GGCC 1 cut(s) 51
BsiHKAI GWGCWC 2 cut(s) 177, 912
BsiSI CCGG 1 cut(s) 60
BslFI GGGAC 1 cut(s) 214
BslI CCNNNNNNNGG 1 cut(s) 264
BsmFI GGGAC 1 cut(s) 214
BsnI GGCC 1 cut(s) 51
Bsp1286I GDGCHC 2 cut(s) 177, 912
Bsp143I GATC 4 cut(s) 187, 300, 601, 814
BspACI CCGC 5 cut(s) 9, 12, 15, 526, 774
BspANI GGCC 1 cut(s) 51
BspCNI CTCAG 3 cut(s) 146, 190, 888
BspFNI CGCG 1 cut(s) 499
BspLI GGNNCC 1 cut(s) 441
BspPI GGATC 2 cut(s) 308, 809
BspQI GCTCTTC 1 cut(s) 636
BsrI ACTGG 3 cut(s) 441, 905, 927
BssMI GATC 4 cut(s) 187, 300, 601, 814
BssSI CACGAG 3 cut(s) 176, 183, 294
Bst2BI CACGAG 3 cut(s) 176, 183, 294
Bst2UI CCWGG 2 cut(s) 573, 771
Bst6I CTCTTC 2 cut(s) 332, 636
BstC8I GCNNGC 3 cut(s) 124, 290, 965
BstDEI CTNAG 4 cut(s) 133, 198, 492, 896
BstEII GGTNACC 1 cut(s) 900
BstF5I GGATG 2 cut(s) 313, 868
BstFNI CGCG 1 cut(s) 499
BstHHI GCGC 2 cut(s) 370, 499
BstKTI GATC 4 cut(s) 190, 303, 604, 817
BstMBI GATC 4 cut(s) 187, 300, 601, 814
BstMWI GCNNNNNNNGC 7 cut(s) 12, 15, 246, 437, 614, 617, 643
BstNI CCWGG 2 cut(s) 573, 771
BstNSI RCATGY 2 cut(s) 229, 967
BstPI GGTNACC 1 cut(s) 900
BstSCI CCNGG 3 cut(s) 58, 571, 769
BstSFI CTRYAG 1 cut(s) 250
BstSLI GKGCMC 1 cut(s) 912
BstUI CGCG 1 cut(s) 499
BstV1I GCAGC 7 cut(s) 18, 595, 598, 601, 604, 764, 793
BsuRI GGCC 1 cut(s) 51
BtgZI GCGATG 1 cut(s) 565
BtsCI GGATG 2 cut(s) 313, 868
BtsI GCAGTG 1 cut(s) 682
BtsIMutI CAGTG 3 cut(s) 45, 682, 912
Cac8I GCNNGC 3 cut(s) 124, 290, 965
CaiI CAGNNNCTG 2 cut(s) 638, 710
CfoI GCGC 2 cut(s) 370, 499
Cfr13I GGNCC 2 cut(s) 49, 255
Csp6I GTAC 1 cut(s) 391
CspCI CAANNNNNGTGG 2 cut(s) 277, 312
CviAII CATG 3 cut(s) 151, 226, 964
CviQI GTAC 1 cut(s) 391
DdeI CTNAG 4 cut(s) 133, 198, 492, 896
DpnI GATC 4 cut(s) 189, 302, 603, 816
DpnII GATC 4 cut(s) 187, 300, 601, 814
Eam1104I CTCTTC 2 cut(s) 332, 636
EarI CTCTTC 2 cut(s) 332, 636
Eco32I GATATC 1 cut(s) 858
Eco47I GGWCC 1 cut(s) 255
Eco57I CTGAAG 2 cut(s) 193, 660
Eco91I GGTNACC 1 cut(s) 900
EcoO65I GGTNACC 1 cut(s) 900
EcoRI GAATTC 1 cut(s) 137
EcoRII CCWGG 2 cut(s) 571, 769
EcoRV GATATC 1 cut(s) 858
FaeI CATG 3 cut(s) 154, 229, 967
FaqI GGGAC 1 cut(s) 214
FatI CATG 3 cut(s) 150, 225, 963
FbaI TGATCA 1 cut(s) 601
FokI GGATG 2 cut(s) 320, 855
FspBI CTAG 1 cut(s) 876
GlaI GCGC 2 cut(s) 369, 498
HaeIII GGCC 1 cut(s) 51
HapII CCGG 1 cut(s) 60
HhaI GCGC 2 cut(s) 370, 499
Hin1II CATG 3 cut(s) 154, 229, 967
Hin6I GCGC 2 cut(s) 368, 497
HinP1I GCGC 2 cut(s) 368, 497
HinfI GANTC 7 cut(s) 131, 262, 536, 628, 682, 701, 707
HpaII CCGG 1 cut(s) 60
HphI GGTGA 4 cut(s) 406, 759, 852, 894
Hpy166II GTNNAC 2 cut(s) 767, 910
Hpy188I TCNGA 4 cut(s) 136, 706, 855, 897
Hpy188III TCNNGA 4 cut(s) 185, 449, 632, 824
Hpy8I GTNNAC 2 cut(s) 767, 910
HpyAV CCTTC 3 cut(s) 353, 475, 839
HpyCH4IV ACGT 2 cut(s) 393, 562
HpyCH4V TGCA 4 cut(s) 400, 713, 910, 967
HpyF10VI GCNNNNNNNGC 7 cut(s) 12, 15, 246, 437, 614, 617, 643
HpyF3I CTNAG 4 cut(s) 133, 198, 492, 896
HpySE526I ACGT 2 cut(s) 393, 562
Hsp92II CATG 3 cut(s) 154, 229, 967
HspAI GCGC 2 cut(s) 368, 497
Ksp22I TGATCA 1 cut(s) 601
Kzo9I GATC 4 cut(s) 187, 300, 601, 814
LguI GCTCTTC 1 cut(s) 636
LmnI GCTCC 1 cut(s) 445
Lsp1109I GCAGC 7 cut(s) 18, 595, 598, 601, 604, 764, 793
LweI GCATC 2 cut(s) 409, 655
MaeI CTAG 1 cut(s) 876
MaeII ACGT 2 cut(s) 393, 562
MaeIII GTNAC 2 cut(s) 500, 900
MalI GATC 4 cut(s) 189, 302, 603, 816
MboI GATC 4 cut(s) 187, 300, 601, 814
MboII GAAGA 8 cut(s) 121, 124, 196, 199, 349, 653, 671, 938
MhlI GDGCHC 2 cut(s) 177, 912
MluCI AATT 8 cut(s) 63, 68, 137, 163, 474, 514, 551, 589
MlyI GAGTC 3 cut(s) 125, 710, 716
MnlI CCTC 8 cut(s) 121, 192, 298, 303, 595, 820, 891, 903
MroXI GAANNNNTTC 1 cut(s) 663
MseI TTAA 2 cut(s) 66, 477
MspA1I CMGCKG 1 cut(s) 9
MspI CCGG 1 cut(s) 60
MspR9I CCNGG 3 cut(s) 60, 573, 771
MvaI CCWGG 2 cut(s) 573, 771
MvnI CGCG 1 cut(s) 499
MwoI GCNNNNNNNGC 7 cut(s) 12, 15, 246, 437, 614, 617, 643
NciI CCSGG 1 cut(s) 60
NdeII GATC 4 cut(s) 187, 300, 601, 814
NlaIII CATG 3 cut(s) 154, 229, 967
NlaIV GGNNCC 1 cut(s) 441
NmeAIII GCCGAG 1 cut(s) 724
NmuCI GTSAC 1 cut(s) 900
NspI RCATGY 2 cut(s) 229, 967
PaeI GCATGC 1 cut(s) 967
PciI ACATGT 1 cut(s) 225
PciSI GCTCTTC 1 cut(s) 636
PdmI GAANNNNTTC 1 cut(s) 663
PfeI GAWTC 4 cut(s) 262, 536, 628, 682
PleI GAGTC 3 cut(s) 125, 709, 715
PpsI GAGTC 3 cut(s) 125, 709, 715
PscI ACATGT 1 cut(s) 225
PsiI TTATAA 4 cut(s) 276, 519, 594, 731
Psp6I CCWGG 2 cut(s) 571, 769
PspEI GGTNACC 1 cut(s) 900
PspGI CCWGG 2 cut(s) 571, 769
PspN4I GGNNCC 1 cut(s) 441
PspPI GGNCC 2 cut(s) 49, 255
PstNI CAGNNNCTG 2 cut(s) 638, 710
RsaI GTAC 1 cut(s) 392
RsaNI GTAC 1 cut(s) 391
SapI GCTCTTC 1 cut(s) 636
SaqAI TTAA 2 cut(s) 66, 477
Sau3AI GATC 4 cut(s) 187, 300, 601, 814
Sau96I GGNCC 2 cut(s) 49, 255
SchI GAGTC 3 cut(s) 125, 710, 716
ScrFI CCNGG 3 cut(s) 60, 573, 771
SduI GDGCHC 2 cut(s) 177, 912
SfaNI GCATC 2 cut(s) 409, 655
SfcI CTRYAG 1 cut(s) 250
SinI GGWCC 1 cut(s) 255
SphI GCATGC 1 cut(s) 967
Sse9I AATT 8 cut(s) 63, 68, 137, 163, 474, 514, 551, 589
SsiI CCGC 5 cut(s) 9, 12, 15, 526, 774
SspMI CTAG 1 cut(s) 876
StyD4I CCNGG 3 cut(s) 58, 571, 769
TaiI ACGT 2 cut(s) 396, 565
TaqI TCGA 3 cut(s) 303, 657, 685
TaqII GACCGA 1 cut(s) 401
TasI AATT 8 cut(s) 63, 68, 137, 163, 474, 514, 551, 589
TauI GCSGC 4 cut(s) 12, 15, 18, 777
TfiI GAWTC 4 cut(s) 262, 536, 628, 682
Tru1I TTAA 2 cut(s) 66, 477
Tru9I TTAA 2 cut(s) 66, 477
TscAI CASTG 3 cut(s) 45, 682, 912
TseFI GTSAC 1 cut(s) 900
TseI GCWGC 7 cut(s) 6, 608, 611, 614, 617, 777, 806
Tsp45I GTSAC 1 cut(s) 900
TspDTI ATGAA 4 cut(s) 42, 324, 705, 857
TspRI CASTG 3 cut(s) 45, 682, 912
VneI GTGCAC 1 cut(s) 908
VpaK11BI GGWCC 1 cut(s) 255
XapI RAATTY 2 cut(s) 68, 137
XceI RCATGY 2 cut(s) 229, 967
XmnI GAANNNNTTC 1 cut(s) 663
XspI CTAG 1 cut(s) 876
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.