Prupe.2G327700_v2.0.a1
MYB Family

transcription factor

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
Physical Location & Seq
Forward (+)
30169885 .. 30171302
1418 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G327700.1

Sequence Viewer

Length: 1308 bp
ATGGGGAGATCAGCATCAGCATCAGGTTGGTGTGATGAAAAGAGCAGCTCAGTAAAGAAAGGGCCATGGACACCGGAGGAGGATGAAAAGCTGGTGGAATACATAAAAAGATATGGGCATGGGAGTTGGAGAGCTCTGCCCAAGCTTGCAGGCTTGAACAGGTGCGGAAAGAGTTGCAGGCTCAGATGGACCAACTATCTCAGGCCTGATATCAAGAGGGGAAACTTCTCCCAGGAAGAAGAGCAAACCATCATCAACCTCCATGCTCTTGTTGGAAACAAATGGTCGGCCATAGCTAATAATCTTCCAGGAAGGACGGATAACGAAATCAAGAACTTTTGGAATACTCATTTGAAGAAAAAGTTGCTCCAAATGGGCATCGATCCTGTTACCGACAGGCCAATCACAGCTAATAATAGTGATAATATTCATAATCTGTACTATCTCATGATCAATCATATTCTCTCCAGTTTGGCACCGCAGTTGCTTGCTTCTTCTGGCACATGCAGCAGCTTGGCTAATAATAATTTGATGATGAATATGAATCCATGGGGTGCTGATCTCATGAGGCTCCACTACTCCGACGCCAAAATCCAAGTCCTGCGAAACATACTAGTACAACAACTCCTAAGCAGCACTAGCACTCCAAATGCGGAAGCAGCTTTTAATTATCTTTTGCCATCGTATTCATCATCATCAGTTCATGATCATATTGATCATGAATATTCAAGAGTCAGTATTAATCATTATAATTATTTTCCTCATCTCCAAGGTTTTGGCAACGGCGGCGCCCCAATTGGTTTTGTTCCACAAAATCCCACTCATGCTAGTGCTCAGCCGTCCAACTTAAGTTCAAACATTTCAGGCCTACTCAAAGCTCTTCATGATCTTGATCATAGCCAGCCGCCACGTGCACCCCCGGTACTAGTACCATCCAGCGGCAGCGGGACCGGGACGTCTGATAAATTATTGGGATATGATGATCATGCAACCGTCTTCTCTAGTACTACTGGCTCAAACAAGATTTGTACCAACAACAACAACAACAACAACAGAGATCATAGCCAGCAGCTTCAGCTTGGAGGTAGCTCATCATCATATGCAACTCCAACAGATCAATTACCACTTTTGGTCCGCTCAGCTGCACCCTCTCCCGAAACTTCCGCTGCCAATCCCACTGTGGAAAACAATATCTCAAATACTACTTATTCAACCACCTTTGAAGCTTGGGGGAATCCTCCTGATCTTATGGATCACGACGACGATGCAACTAATCACTCCTACTGGAAAGACATCTTCATGGAGTAA

Protein Analysis

436

Amino Acids

47.96

Weight (kDa)

6.4

Isoelectric Point (pI)

48.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024379)

Species Orthologous Gene IDs
malus_domestica MD01G1237300.v1.1
prunus_persica Prupe.2G327700_v2.0.a1
pyrus_communis pycom01g24510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 750
AasI GACNNNNNNGTC 1 cut(s) 955
AatII GACGTC 1 cut(s) 959
AccB1I GGYRCC 2 cut(s) 475, 788
AccBSI CCGCTC 1 cut(s) 1137
AciI CCGC 9 cut(s) 165, 479, 653, 786, 905, 939, 945, 1135, 1164
AclWI GGATC 2 cut(s) 377, 1260
AcoI YGGCCR 1 cut(s) 288
AcuI CTGAAG 1 cut(s) 1058
AcvI CACGTG 1 cut(s) 911
AcyI GRCGYC 3 cut(s) 585, 789, 956
AfaI GTAC 6 cut(s) 440, 618, 924, 930, 1006, 1030
AfiI CCNNNNNNNGG 1 cut(s) 938
AflII CTTAAG 1 cut(s) 847
AgsI TTSAA 6 cut(s) 157, 355, 729, 855, 1212, 1223
AhlI ACTAGT 2 cut(s) 613, 925
AjnI CCWGG 2 cut(s) 231, 307
Alw21I GWGCWC 3 cut(s) 136, 835, 916
Alw44I GTGCAC 1 cut(s) 912
AlwI GGATC 2 cut(s) 377, 1260
AoxI GGCC 5 cut(s) 62, 203, 288, 398, 865
ApaLI GTGCAC 1 cut(s) 912
ApeKI GCWGC 9 cut(s) 45, 507, 510, 633, 659, 942, 1069, 1142, 1166
ArsI GACNNNNNNTTYG 2 cut(s) 582, 614
AseI ATTAAT 1 cut(s) 741
AspLEI GCGC 1 cut(s) 791
AspS9I GGNCC 4 cut(s) 62, 189, 948, 1132
AsuC2I CCSGG 2 cut(s) 920, 952
AvaII GGWCC 3 cut(s) 189, 948, 1132
BaeGI GKGCMC 1 cut(s) 916
BanI GGYRCC 2 cut(s) 475, 788
BanII GRGCYC 1 cut(s) 136
BbrPI CACGTG 1 cut(s) 911
BbsI GAAGAC 1 cut(s) 988
Bbv12I GWGCWC 3 cut(s) 136, 835, 916
BbvI GCAGC 9 cut(s) 57, 519, 522, 645, 671, 954, 1081, 1129, 1153
BccI CCATC 4 cut(s) 180, 257, 688, 940
BceAI ACGGC 2 cut(s) 799, 823
BcgI CGANNNNNNTGC 2 cut(s) 1247, 1281
BciT130I CCWGG 2 cut(s) 233, 309
BclI TGATCA 5 cut(s) 450, 706, 715, 892, 982
BcnI CCSGG 2 cut(s) 920, 952
BcuI ACTAGT 2 cut(s) 613, 925
BfaI CTAG 5 cut(s) 614, 639, 828, 926, 1002
BfoI RGCGCY 1 cut(s) 792
BfrI CTTAAG 1 cut(s) 847
BlpI GCTNAGC 2 cut(s) 834, 1138
BmcAI AGTACT 1 cut(s) 1006
Bme1390I CCNGG 4 cut(s) 233, 309, 920, 952
Bme18I GGWCC 3 cut(s) 189, 948, 1132
BmgT120I GGNCC 4 cut(s) 62, 189, 948, 1132
BmiI GGNNCC 4 cut(s) 477, 572, 790, 949
BmrFI CCNGG 4 cut(s) 233, 309, 920, 952
BmsI GCATC 4 cut(s) 23, 29, 387, 1255
BpiI GAAGAC 1 cut(s) 988
BpmI CTGGAG 1 cut(s) 451
Bpu10I CCTNAGC 1 cut(s) 629
Bpu1102I GCTNAGC 2 cut(s) 834, 1138
BpuMI CCSGG 2 cut(s) 920, 952
Bsa29I ATCGAT 1 cut(s) 381
BsaAI YACGTR 1 cut(s) 911
BsaBI GATNNNNATC 2 cut(s) 13, 891
BsaHI GRCGYC 3 cut(s) 585, 789, 956
BsaJI CCNNGG 5 cut(s) 65, 231, 548, 769, 918
BsaWI WCCGGW 1 cut(s) 73
BsaXI ACNNNNNCTCC 4 cut(s) 609, 628, 639, 658
Bsc4I CCNNNNNNNGG 1 cut(s) 938
Bse1I ACTGG 3 cut(s) 468, 1015, 1289
Bse8I GATNNNNATC 2 cut(s) 13, 891
BseBI CCWGG 2 cut(s) 233, 309
BseCI ATCGAT 1 cut(s) 381
BseDI CCNNGG 5 cut(s) 65, 231, 548, 769, 918
BseGI GGATG 2 cut(s) 88, 932
BseJI GATNNNNATC 2 cut(s) 13, 891
BseLI CCNNNNNNNGG 1 cut(s) 938
BseMII CTCAG 5 cut(s) 63, 196, 214, 848, 1152
BseNI ACTGG 3 cut(s) 468, 1015, 1289
BseRI GAGGAG 1 cut(s) 92
BseSI GKGCMC 1 cut(s) 916
BseXI GCAGC 9 cut(s) 57, 519, 522, 645, 671, 954, 1081, 1129, 1153
BsgI GTGCAG 1 cut(s) 1128
BshFI GGCC 5 cut(s) 64, 205, 290, 400, 867
BshNI GGYRCC 2 cut(s) 475, 788
BshVI ATCGAT 1 cut(s) 381
BsiHKAI GWGCWC 3 cut(s) 136, 835, 916
BsiSI CCGG 3 cut(s) 74, 920, 951
BslFI GGGAC 2 cut(s) 961, 967
BslI CCNNNNNNNGG 1 cut(s) 938
BsmFI GGGAC 2 cut(s) 961, 967
BsnI GGCC 5 cut(s) 64, 205, 290, 400, 867
Bsp1286I GDGCHC 3 cut(s) 136, 835, 916
Bsp1720I GCTNAGC 2 cut(s) 834, 1138
Bsp19I CCATGG 2 cut(s) 65, 548
BspACI CCGC 9 cut(s) 165, 479, 653, 786, 905, 939, 945, 1135, 1164
BspANI GGCC 5 cut(s) 64, 205, 290, 400, 867
BspCNI CTCAG 5 cut(s) 62, 195, 213, 847, 1151
BspDI ATCGAT 1 cut(s) 381
BspHI TCATGA 5 cut(s) 447, 564, 703, 718, 883
BspLI GGNNCC 4 cut(s) 477, 572, 790, 949
BspPI GGATC 2 cut(s) 377, 1260
BspQI GCTCTTC 2 cut(s) 234, 885
BspT107I GGYRCC 2 cut(s) 475, 788
BspTI CTTAAG 1 cut(s) 847
BsrBI CCGCTC 1 cut(s) 1137
BsrI ACTGG 3 cut(s) 468, 1015, 1289
BssECI CCNNGG 5 cut(s) 65, 231, 548, 769, 918
BssNI GRCGYC 3 cut(s) 585, 789, 956
BssT1I CCWWGG 3 cut(s) 65, 548, 769
Bst2UI CCWGG 2 cut(s) 233, 309
Bst4CI ACNGT 2 cut(s) 994, 1180
Bst6I CTCTTC 2 cut(s) 234, 885
BstACI GRCGYC 3 cut(s) 585, 789, 956
BstAFI CTTAAG 1 cut(s) 847
BstBAI YACGTR 1 cut(s) 911
BstC8I GCNNGC 6 cut(s) 147, 151, 179, 489, 902, 1067
BstDEI CTNAG 6 cut(s) 49, 182, 200, 629, 834, 1138
BstDSI CCRYGG 2 cut(s) 65, 548
BstF5I GGATG 2 cut(s) 88, 932
BstH2I RGCGCY 1 cut(s) 792
BstHHI GCGC 1 cut(s) 791
BstMWI GCNNNNNNNGC 5 cut(s) 507, 639, 659, 786, 1075
BstNI CCWGG 2 cut(s) 233, 309
BstNSI RCATGY 1 cut(s) 507
BstSCI CCNGG 4 cut(s) 231, 307, 918, 950
BstSLI GKGCMC 1 cut(s) 916
BstV1I GCAGC 9 cut(s) 57, 519, 522, 645, 671, 954, 1081, 1129, 1153
BstV2I GAAGAC 1 cut(s) 988
BstXI CCANNNNNNTGG 1 cut(s) 776
Bsu15I ATCGAT 1 cut(s) 381
BsuRI GGCC 5 cut(s) 64, 205, 290, 400, 867
BsuTUI ATCGAT 1 cut(s) 381
BtgI CCRYGG 2 cut(s) 65, 548
BtsCI GGATG 2 cut(s) 88, 932
BtsIMutI CAGTG 1 cut(s) 1176
Cac8I GCNNGC 6 cut(s) 147, 151, 179, 489, 902, 1067
CciI TCATGA 5 cut(s) 447, 564, 703, 718, 883
CfoI GCGC 1 cut(s) 791
Cfr13I GGNCC 4 cut(s) 62, 189, 948, 1132
ClaI ATCGAT 1 cut(s) 381
CseI GACGC 1 cut(s) 593
Csp6I GTAC 6 cut(s) 439, 617, 923, 929, 1005, 1029
CviQI GTAC 6 cut(s) 439, 617, 923, 929, 1005, 1029
DdeI CTNAG 6 cut(s) 49, 182, 200, 629, 834, 1138
DinI GGCGCC 1 cut(s) 790
DrdI GACNNNNNNGTC 1 cut(s) 955
DseDI GACNNNNNNGTC 1 cut(s) 955
EaeI YGGCCR 1 cut(s) 288
Eam1104I CTCTTC 2 cut(s) 234, 885
EarI CTCTTC 2 cut(s) 234, 885
Ecl136II GAGCTC 1 cut(s) 134
Eco130I CCWWGG 3 cut(s) 65, 548, 769
Eco147I AGGCCT 2 cut(s) 205, 867
Eco24I GRGCYC 1 cut(s) 136
Eco32I GATATC 1 cut(s) 211
Eco47I GGWCC 3 cut(s) 189, 948, 1132
Eco53kI GAGCTC 1 cut(s) 134
Eco57I CTGAAG 1 cut(s) 1058
Eco72I CACGTG 1 cut(s) 911
EcoICRI GAGCTC 1 cut(s) 134
EcoRII CCWGG 2 cut(s) 231, 307
EcoRV GATATC 1 cut(s) 211
EcoT14I CCWWGG 3 cut(s) 65, 548, 769
EcoT38I GRGCYC 1 cut(s) 136
EgeI GGCGCC 1 cut(s) 790
EheI GGCGCC 1 cut(s) 790
ErhI CCWWGG 3 cut(s) 65, 548, 769
FaqI GGGAC 2 cut(s) 961, 967
FauI CCCGC 1 cut(s) 938
FauNDI CATATG 1 cut(s) 1099
FbaI TGATCA 5 cut(s) 450, 706, 715, 892, 982
FokI GGATG 2 cut(s) 95, 919
FriOI GRGCYC 1 cut(s) 136
FspBI CTAG 5 cut(s) 614, 639, 828, 926, 1002
GlaI GCGC 1 cut(s) 790
GsuI CTGGAG 1 cut(s) 451
HaeII RGCGCY 1 cut(s) 792
HaeIII GGCC 5 cut(s) 64, 205, 290, 400, 867
HapII CCGG 3 cut(s) 74, 920, 951
HgaI GACGC 1 cut(s) 593
HhaI GCGC 1 cut(s) 791
Hin1I GRCGYC 3 cut(s) 585, 789, 956
Hin6I GCGC 1 cut(s) 789
HinP1I GCGC 1 cut(s) 789
HindIII AAGCTT 2 cut(s) 143, 1224
HinfI GANTC 3 cut(s) 544, 732, 1234
HpaII CCGG 3 cut(s) 74, 920, 951
Hpy166II GTNNAC 1 cut(s) 914
Hpy188I TCNGA 3 cut(s) 185, 583, 961
Hpy8I GTNNAC 1 cut(s) 914
Hpy99I CGWCG 3 cut(s) 587, 1262, 1265
HpyAV CCTTC 1 cut(s) 306
HpyCH4III ACNGT 2 cut(s) 994, 1180
HpyCH4IV ACGT 2 cut(s) 910, 956
HpyCH4V TGCA 8 cut(s) 149, 177, 507, 914, 989, 1103, 1145, 1268
HpyF10VI GCNNNNNNNGC 5 cut(s) 507, 639, 659, 786, 1075
HpyF3I CTNAG 6 cut(s) 49, 182, 200, 629, 834, 1138
HpySE526I ACGT 2 cut(s) 910, 956
Hsp92I GRCGYC 3 cut(s) 585, 789, 956
HspAI GCGC 1 cut(s) 789
KasI GGCGCC 1 cut(s) 788
Ksp22I TGATCA 5 cut(s) 450, 706, 715, 892, 982
LguI GCTCTTC 2 cut(s) 234, 885
LmnI GCTCC 2 cut(s) 372, 576
Lsp1109I GCAGC 9 cut(s) 57, 519, 522, 645, 671, 954, 1081, 1129, 1153
LweI GCATC 4 cut(s) 23, 29, 387, 1255
MaeI CTAG 5 cut(s) 614, 639, 828, 926, 1002
MaeII ACGT 2 cut(s) 910, 956
MaeIII GTNAC 1 cut(s) 388
MbiI CCGCTC 1 cut(s) 1137
MboII GAAGA 8 cut(s) 248, 251, 296, 367, 486, 872, 988, 1288
MfeI CAATTG 1 cut(s) 795
MhlI GDGCHC 3 cut(s) 136, 835, 916
MluCI AATT 6 cut(s) 526, 667, 751, 795, 965, 1118
Mly113I GGCGCC 1 cut(s) 789
MlyI GAGTC 1 cut(s) 741
MmeI TCCRAC 5 cut(s) 107, 253, 606, 867, 1133
MnlI CCTC 9 cut(s) 70, 73, 210, 269, 561, 771, 1076, 1159, 1248
MseI TTAA 3 cut(s) 666, 741, 848
MslI CAYNNNNRTG 2 cut(s) 828, 1298
MspA1I CMGCKG 4 cut(s) 939, 945, 1142, 1166
MspCI CTTAAG 1 cut(s) 847
MspI CCGG 3 cut(s) 74, 920, 951
MspR9I CCNGG 4 cut(s) 233, 309, 920, 952
MunI CAATTG 1 cut(s) 795
MvaI CCWGG 2 cut(s) 233, 309
MwoI GCNNNNNNNGC 5 cut(s) 507, 639, 659, 786, 1075
NarI GGCGCC 1 cut(s) 789
NciI CCSGG 2 cut(s) 920, 952
NcoI CCATGG 2 cut(s) 65, 548
NdeI CATATG 1 cut(s) 1099
NlaIV GGNNCC 4 cut(s) 477, 572, 790, 949
NspI RCATGY 1 cut(s) 507
PagI TCATGA 5 cut(s) 447, 564, 703, 718, 883
PceI AGGCCT 2 cut(s) 205, 867
PciSI GCTCTTC 2 cut(s) 234, 885
PfeI GAWTC 2 cut(s) 544, 1234
PfoI TCCNGGA 1 cut(s) 307
PleI GAGTC 1 cut(s) 740
PluTI GGCGCC 1 cut(s) 792
PmaCI CACGTG 1 cut(s) 911
PmlI CACGTG 1 cut(s) 911
PpsI GAGTC 1 cut(s) 740
Ppu21I YACGTR 1 cut(s) 911
PshBI ATTAAT 1 cut(s) 741
PsiI TTATAA 1 cut(s) 750
Psp124BI GAGCTC 1 cut(s) 136
Psp6I CCWGG 2 cut(s) 231, 307
PspCI CACGTG 1 cut(s) 911
PspGI CCWGG 2 cut(s) 231, 307
PspN4I GGNNCC 4 cut(s) 477, 572, 790, 949
PspPI GGNCC 4 cut(s) 62, 189, 948, 1132
PvuII CAGCTG 1 cut(s) 1142
RsaI GTAC 6 cut(s) 440, 618, 924, 930, 1006, 1030
RsaNI GTAC 6 cut(s) 439, 617, 923, 929, 1005, 1029
RseI CAYNNNNRTG 2 cut(s) 828, 1298
SacI GAGCTC 1 cut(s) 136
SapI GCTCTTC 2 cut(s) 234, 885
SaqAI TTAA 3 cut(s) 666, 741, 848
Sau96I GGNCC 4 cut(s) 62, 189, 948, 1132
ScaI AGTACT 1 cut(s) 1006
SchI GAGTC 1 cut(s) 741
ScrFI CCNGG 4 cut(s) 233, 309, 920, 952
SduI GDGCHC 3 cut(s) 136, 835, 916
SfaNI GCATC 4 cut(s) 23, 29, 387, 1255
SfoI GGCGCC 1 cut(s) 790
SinI GGWCC 3 cut(s) 189, 948, 1132
SmiMI CAYNNNNRTG 2 cut(s) 828, 1298
SmlI CTYRAG 1 cut(s) 847
SmoI CTYRAG 1 cut(s) 847
SpeI ACTAGT 2 cut(s) 613, 925
Sse9I AATT 6 cut(s) 526, 667, 751, 795, 965, 1118
SseBI AGGCCT 2 cut(s) 205, 867
SsiI CCGC 9 cut(s) 165, 479, 653, 786, 905, 939, 945, 1135, 1164
SspDI GGCGCC 1 cut(s) 788
SspI AATATT 2 cut(s) 427, 725
SspMI CTAG 5 cut(s) 614, 639, 828, 926, 1002
SstI GAGCTC 1 cut(s) 136
StuI AGGCCT 2 cut(s) 205, 867
StyD4I CCNGG 4 cut(s) 231, 307, 918, 950
StyI CCWWGG 3 cut(s) 65, 548, 769
TaaI ACNGT 2 cut(s) 994, 1180
TaiI ACGT 2 cut(s) 913, 959
TaqI TCGA 1 cut(s) 381
TasI AATT 6 cut(s) 526, 667, 751, 795, 965, 1118
TatI WGTACW 3 cut(s) 438, 616, 1004
TauI GCSGC 3 cut(s) 789, 907, 942
TfiI GAWTC 2 cut(s) 544, 1234
Tru1I TTAA 3 cut(s) 666, 741, 848
Tru9I TTAA 3 cut(s) 666, 741, 848
TscAI CASTG 1 cut(s) 1183
TseI GCWGC 9 cut(s) 45, 507, 510, 633, 659, 942, 1069, 1142, 1166
TspGWI ACGGA 1 cut(s) 332
TspRI CASTG 1 cut(s) 1183
Vha464I CTTAAG 1 cut(s) 847
VneI GTGCAC 1 cut(s) 912
VpaK11BI GGWCC 3 cut(s) 189, 948, 1132
VspI ATTAAT 1 cut(s) 741
XceI RCATGY 1 cut(s) 507
XcmI CCANNNNNNNNNTGG 2 cut(s) 269, 1177
XspI CTAG 5 cut(s) 614, 639, 828, 926, 1002
ZraI GACGTC 1 cut(s) 957
ZrmI AGTACT 1 cut(s) 1006
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.