transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD01G1237300.v1.1 |
| prunus_persica | Prupe.2G327700_v2.0.a1 |
| pyrus_communis | pycom01g24510 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 750 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 955 |
| AatII | GACGTC | 1 cut(s) | 959 |
| AccB1I | GGYRCC | 2 cut(s) | 475, 788 |
| AccBSI | CCGCTC | 1 cut(s) | 1137 |
| AciI | CCGC | 9 cut(s) | 165, 479, 653, 786, 905, 939, 945, 1135, 1164 |
| AclWI | GGATC | 2 cut(s) | 377, 1260 |
| AcoI | YGGCCR | 1 cut(s) | 288 |
| AcuI | CTGAAG | 1 cut(s) | 1058 |
| AcvI | CACGTG | 1 cut(s) | 911 |
| AcyI | GRCGYC | 3 cut(s) | 585, 789, 956 |
| AfaI | GTAC | 6 cut(s) | 440, 618, 924, 930, 1006, 1030 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 938 |
| AflII | CTTAAG | 1 cut(s) | 847 |
| AgsI | TTSAA | 6 cut(s) | 157, 355, 729, 855, 1212, 1223 |
| AhlI | ACTAGT | 2 cut(s) | 613, 925 |
| AjnI | CCWGG | 2 cut(s) | 231, 307 |
| Alw21I | GWGCWC | 3 cut(s) | 136, 835, 916 |
| Alw44I | GTGCAC | 1 cut(s) | 912 |
| AlwI | GGATC | 2 cut(s) | 377, 1260 |
| AoxI | GGCC | 5 cut(s) | 62, 203, 288, 398, 865 |
| ApaLI | GTGCAC | 1 cut(s) | 912 |
| ApeKI | GCWGC | 9 cut(s) | 45, 507, 510, 633, 659, 942, 1069, 1142, 1166 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 582, 614 |
| AseI | ATTAAT | 1 cut(s) | 741 |
| AspLEI | GCGC | 1 cut(s) | 791 |
| AspS9I | GGNCC | 4 cut(s) | 62, 189, 948, 1132 |
| AsuC2I | CCSGG | 2 cut(s) | 920, 952 |
| AvaII | GGWCC | 3 cut(s) | 189, 948, 1132 |
| BaeGI | GKGCMC | 1 cut(s) | 916 |
| BanI | GGYRCC | 2 cut(s) | 475, 788 |
| BanII | GRGCYC | 1 cut(s) | 136 |
| BbrPI | CACGTG | 1 cut(s) | 911 |
| BbsI | GAAGAC | 1 cut(s) | 988 |
| Bbv12I | GWGCWC | 3 cut(s) | 136, 835, 916 |
| BbvI | GCAGC | 9 cut(s) | 57, 519, 522, 645, 671, 954, 1081, 1129, 1153 |
| BccI | CCATC | 4 cut(s) | 180, 257, 688, 940 |
| BceAI | ACGGC | 2 cut(s) | 799, 823 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1247, 1281 |
| BciT130I | CCWGG | 2 cut(s) | 233, 309 |
| BclI | TGATCA | 5 cut(s) | 450, 706, 715, 892, 982 |
| BcnI | CCSGG | 2 cut(s) | 920, 952 |
| BcuI | ACTAGT | 2 cut(s) | 613, 925 |
| BfaI | CTAG | 5 cut(s) | 614, 639, 828, 926, 1002 |
| BfoI | RGCGCY | 1 cut(s) | 792 |
| BfrI | CTTAAG | 1 cut(s) | 847 |
| BlpI | GCTNAGC | 2 cut(s) | 834, 1138 |
| BmcAI | AGTACT | 1 cut(s) | 1006 |
| Bme1390I | CCNGG | 4 cut(s) | 233, 309, 920, 952 |
| Bme18I | GGWCC | 3 cut(s) | 189, 948, 1132 |
| BmgT120I | GGNCC | 4 cut(s) | 62, 189, 948, 1132 |
| BmiI | GGNNCC | 4 cut(s) | 477, 572, 790, 949 |
| BmrFI | CCNGG | 4 cut(s) | 233, 309, 920, 952 |
| BmsI | GCATC | 4 cut(s) | 23, 29, 387, 1255 |
| BpiI | GAAGAC | 1 cut(s) | 988 |
| BpmI | CTGGAG | 1 cut(s) | 451 |
| Bpu10I | CCTNAGC | 1 cut(s) | 629 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 834, 1138 |
| BpuMI | CCSGG | 2 cut(s) | 920, 952 |
| Bsa29I | ATCGAT | 1 cut(s) | 381 |
| BsaAI | YACGTR | 1 cut(s) | 911 |
| BsaBI | GATNNNNATC | 2 cut(s) | 13, 891 |
| BsaHI | GRCGYC | 3 cut(s) | 585, 789, 956 |
| BsaJI | CCNNGG | 5 cut(s) | 65, 231, 548, 769, 918 |
| BsaWI | WCCGGW | 1 cut(s) | 73 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 609, 628, 639, 658 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 938 |
| Bse1I | ACTGG | 3 cut(s) | 468, 1015, 1289 |
| Bse8I | GATNNNNATC | 2 cut(s) | 13, 891 |
| BseBI | CCWGG | 2 cut(s) | 233, 309 |
| BseCI | ATCGAT | 1 cut(s) | 381 |
| BseDI | CCNNGG | 5 cut(s) | 65, 231, 548, 769, 918 |
| BseGI | GGATG | 2 cut(s) | 88, 932 |
| BseJI | GATNNNNATC | 2 cut(s) | 13, 891 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 938 |
| BseMII | CTCAG | 5 cut(s) | 63, 196, 214, 848, 1152 |
| BseNI | ACTGG | 3 cut(s) | 468, 1015, 1289 |
| BseRI | GAGGAG | 1 cut(s) | 92 |
| BseSI | GKGCMC | 1 cut(s) | 916 |
| BseXI | GCAGC | 9 cut(s) | 57, 519, 522, 645, 671, 954, 1081, 1129, 1153 |
| BsgI | GTGCAG | 1 cut(s) | 1128 |
| BshFI | GGCC | 5 cut(s) | 64, 205, 290, 400, 867 |
| BshNI | GGYRCC | 2 cut(s) | 475, 788 |
| BshVI | ATCGAT | 1 cut(s) | 381 |
| BsiHKAI | GWGCWC | 3 cut(s) | 136, 835, 916 |
| BsiSI | CCGG | 3 cut(s) | 74, 920, 951 |
| BslFI | GGGAC | 2 cut(s) | 961, 967 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 938 |
| BsmFI | GGGAC | 2 cut(s) | 961, 967 |
| BsnI | GGCC | 5 cut(s) | 64, 205, 290, 400, 867 |
| Bsp1286I | GDGCHC | 3 cut(s) | 136, 835, 916 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 834, 1138 |
| Bsp19I | CCATGG | 2 cut(s) | 65, 548 |
| BspACI | CCGC | 9 cut(s) | 165, 479, 653, 786, 905, 939, 945, 1135, 1164 |
| BspANI | GGCC | 5 cut(s) | 64, 205, 290, 400, 867 |
| BspCNI | CTCAG | 5 cut(s) | 62, 195, 213, 847, 1151 |
| BspDI | ATCGAT | 1 cut(s) | 381 |
| BspHI | TCATGA | 5 cut(s) | 447, 564, 703, 718, 883 |
| BspLI | GGNNCC | 4 cut(s) | 477, 572, 790, 949 |
| BspPI | GGATC | 2 cut(s) | 377, 1260 |
| BspQI | GCTCTTC | 2 cut(s) | 234, 885 |
| BspT107I | GGYRCC | 2 cut(s) | 475, 788 |
| BspTI | CTTAAG | 1 cut(s) | 847 |
| BsrBI | CCGCTC | 1 cut(s) | 1137 |
| BsrI | ACTGG | 3 cut(s) | 468, 1015, 1289 |
| BssECI | CCNNGG | 5 cut(s) | 65, 231, 548, 769, 918 |
| BssNI | GRCGYC | 3 cut(s) | 585, 789, 956 |
| BssT1I | CCWWGG | 3 cut(s) | 65, 548, 769 |
| Bst2UI | CCWGG | 2 cut(s) | 233, 309 |
| Bst4CI | ACNGT | 2 cut(s) | 994, 1180 |
| Bst6I | CTCTTC | 2 cut(s) | 234, 885 |
| BstACI | GRCGYC | 3 cut(s) | 585, 789, 956 |
| BstAFI | CTTAAG | 1 cut(s) | 847 |
| BstBAI | YACGTR | 1 cut(s) | 911 |
| BstC8I | GCNNGC | 6 cut(s) | 147, 151, 179, 489, 902, 1067 |
| BstDEI | CTNAG | 6 cut(s) | 49, 182, 200, 629, 834, 1138 |
| BstDSI | CCRYGG | 2 cut(s) | 65, 548 |
| BstF5I | GGATG | 2 cut(s) | 88, 932 |
| BstH2I | RGCGCY | 1 cut(s) | 792 |
| BstHHI | GCGC | 1 cut(s) | 791 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 507, 639, 659, 786, 1075 |
| BstNI | CCWGG | 2 cut(s) | 233, 309 |
| BstNSI | RCATGY | 1 cut(s) | 507 |
| BstSCI | CCNGG | 4 cut(s) | 231, 307, 918, 950 |
| BstSLI | GKGCMC | 1 cut(s) | 916 |
| BstV1I | GCAGC | 9 cut(s) | 57, 519, 522, 645, 671, 954, 1081, 1129, 1153 |
| BstV2I | GAAGAC | 1 cut(s) | 988 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 776 |
| Bsu15I | ATCGAT | 1 cut(s) | 381 |
| BsuRI | GGCC | 5 cut(s) | 64, 205, 290, 400, 867 |
| BsuTUI | ATCGAT | 1 cut(s) | 381 |
| BtgI | CCRYGG | 2 cut(s) | 65, 548 |
| BtsCI | GGATG | 2 cut(s) | 88, 932 |
| BtsIMutI | CAGTG | 1 cut(s) | 1176 |
| Cac8I | GCNNGC | 6 cut(s) | 147, 151, 179, 489, 902, 1067 |
| CciI | TCATGA | 5 cut(s) | 447, 564, 703, 718, 883 |
| CfoI | GCGC | 1 cut(s) | 791 |
| Cfr13I | GGNCC | 4 cut(s) | 62, 189, 948, 1132 |
| ClaI | ATCGAT | 1 cut(s) | 381 |
| CseI | GACGC | 1 cut(s) | 593 |
| Csp6I | GTAC | 6 cut(s) | 439, 617, 923, 929, 1005, 1029 |
| CviQI | GTAC | 6 cut(s) | 439, 617, 923, 929, 1005, 1029 |
| DdeI | CTNAG | 6 cut(s) | 49, 182, 200, 629, 834, 1138 |
| DinI | GGCGCC | 1 cut(s) | 790 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 955 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 955 |
| EaeI | YGGCCR | 1 cut(s) | 288 |
| Eam1104I | CTCTTC | 2 cut(s) | 234, 885 |
| EarI | CTCTTC | 2 cut(s) | 234, 885 |
| Ecl136II | GAGCTC | 1 cut(s) | 134 |
| Eco130I | CCWWGG | 3 cut(s) | 65, 548, 769 |
| Eco147I | AGGCCT | 2 cut(s) | 205, 867 |
| Eco24I | GRGCYC | 1 cut(s) | 136 |
| Eco32I | GATATC | 1 cut(s) | 211 |
| Eco47I | GGWCC | 3 cut(s) | 189, 948, 1132 |
| Eco53kI | GAGCTC | 1 cut(s) | 134 |
| Eco57I | CTGAAG | 1 cut(s) | 1058 |
| Eco72I | CACGTG | 1 cut(s) | 911 |
| EcoICRI | GAGCTC | 1 cut(s) | 134 |
| EcoRII | CCWGG | 2 cut(s) | 231, 307 |
| EcoRV | GATATC | 1 cut(s) | 211 |
| EcoT14I | CCWWGG | 3 cut(s) | 65, 548, 769 |
| EcoT38I | GRGCYC | 1 cut(s) | 136 |
| EgeI | GGCGCC | 1 cut(s) | 790 |
| EheI | GGCGCC | 1 cut(s) | 790 |
| ErhI | CCWWGG | 3 cut(s) | 65, 548, 769 |
| FaqI | GGGAC | 2 cut(s) | 961, 967 |
| FauI | CCCGC | 1 cut(s) | 938 |
| FauNDI | CATATG | 1 cut(s) | 1099 |
| FbaI | TGATCA | 5 cut(s) | 450, 706, 715, 892, 982 |
| FokI | GGATG | 2 cut(s) | 95, 919 |
| FriOI | GRGCYC | 1 cut(s) | 136 |
| FspBI | CTAG | 5 cut(s) | 614, 639, 828, 926, 1002 |
| GlaI | GCGC | 1 cut(s) | 790 |
| GsuI | CTGGAG | 1 cut(s) | 451 |
| HaeII | RGCGCY | 1 cut(s) | 792 |
| HaeIII | GGCC | 5 cut(s) | 64, 205, 290, 400, 867 |
| HapII | CCGG | 3 cut(s) | 74, 920, 951 |
| HgaI | GACGC | 1 cut(s) | 593 |
| HhaI | GCGC | 1 cut(s) | 791 |
| Hin1I | GRCGYC | 3 cut(s) | 585, 789, 956 |
| Hin6I | GCGC | 1 cut(s) | 789 |
| HinP1I | GCGC | 1 cut(s) | 789 |
| HindIII | AAGCTT | 2 cut(s) | 143, 1224 |
| HinfI | GANTC | 3 cut(s) | 544, 732, 1234 |
| HpaII | CCGG | 3 cut(s) | 74, 920, 951 |
| Hpy166II | GTNNAC | 1 cut(s) | 914 |
| Hpy188I | TCNGA | 3 cut(s) | 185, 583, 961 |
| Hpy8I | GTNNAC | 1 cut(s) | 914 |
| Hpy99I | CGWCG | 3 cut(s) | 587, 1262, 1265 |
| HpyAV | CCTTC | 1 cut(s) | 306 |
| HpyCH4III | ACNGT | 2 cut(s) | 994, 1180 |
| HpyCH4IV | ACGT | 2 cut(s) | 910, 956 |
| HpyCH4V | TGCA | 8 cut(s) | 149, 177, 507, 914, 989, 1103, 1145, 1268 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 507, 639, 659, 786, 1075 |
| HpyF3I | CTNAG | 6 cut(s) | 49, 182, 200, 629, 834, 1138 |
| HpySE526I | ACGT | 2 cut(s) | 910, 956 |
| Hsp92I | GRCGYC | 3 cut(s) | 585, 789, 956 |
| HspAI | GCGC | 1 cut(s) | 789 |
| KasI | GGCGCC | 1 cut(s) | 788 |
| Ksp22I | TGATCA | 5 cut(s) | 450, 706, 715, 892, 982 |
| LguI | GCTCTTC | 2 cut(s) | 234, 885 |
| LmnI | GCTCC | 2 cut(s) | 372, 576 |
| Lsp1109I | GCAGC | 9 cut(s) | 57, 519, 522, 645, 671, 954, 1081, 1129, 1153 |
| LweI | GCATC | 4 cut(s) | 23, 29, 387, 1255 |
| MaeI | CTAG | 5 cut(s) | 614, 639, 828, 926, 1002 |
| MaeII | ACGT | 2 cut(s) | 910, 956 |
| MaeIII | GTNAC | 1 cut(s) | 388 |
| MbiI | CCGCTC | 1 cut(s) | 1137 |
| MboII | GAAGA | 8 cut(s) | 248, 251, 296, 367, 486, 872, 988, 1288 |
| MfeI | CAATTG | 1 cut(s) | 795 |
| MhlI | GDGCHC | 3 cut(s) | 136, 835, 916 |
| MluCI | AATT | 6 cut(s) | 526, 667, 751, 795, 965, 1118 |
| Mly113I | GGCGCC | 1 cut(s) | 789 |
| MlyI | GAGTC | 1 cut(s) | 741 |
| MmeI | TCCRAC | 5 cut(s) | 107, 253, 606, 867, 1133 |
| MnlI | CCTC | 9 cut(s) | 70, 73, 210, 269, 561, 771, 1076, 1159, 1248 |
| MseI | TTAA | 3 cut(s) | 666, 741, 848 |
| MslI | CAYNNNNRTG | 2 cut(s) | 828, 1298 |
| MspA1I | CMGCKG | 4 cut(s) | 939, 945, 1142, 1166 |
| MspCI | CTTAAG | 1 cut(s) | 847 |
| MspI | CCGG | 3 cut(s) | 74, 920, 951 |
| MspR9I | CCNGG | 4 cut(s) | 233, 309, 920, 952 |
| MunI | CAATTG | 1 cut(s) | 795 |
| MvaI | CCWGG | 2 cut(s) | 233, 309 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 507, 639, 659, 786, 1075 |
| NarI | GGCGCC | 1 cut(s) | 789 |
| NciI | CCSGG | 2 cut(s) | 920, 952 |
| NcoI | CCATGG | 2 cut(s) | 65, 548 |
| NdeI | CATATG | 1 cut(s) | 1099 |
| NlaIV | GGNNCC | 4 cut(s) | 477, 572, 790, 949 |
| NspI | RCATGY | 1 cut(s) | 507 |
| PagI | TCATGA | 5 cut(s) | 447, 564, 703, 718, 883 |
| PceI | AGGCCT | 2 cut(s) | 205, 867 |
| PciSI | GCTCTTC | 2 cut(s) | 234, 885 |
| PfeI | GAWTC | 2 cut(s) | 544, 1234 |
| PfoI | TCCNGGA | 1 cut(s) | 307 |
| PleI | GAGTC | 1 cut(s) | 740 |
| PluTI | GGCGCC | 1 cut(s) | 792 |
| PmaCI | CACGTG | 1 cut(s) | 911 |
| PmlI | CACGTG | 1 cut(s) | 911 |
| PpsI | GAGTC | 1 cut(s) | 740 |
| Ppu21I | YACGTR | 1 cut(s) | 911 |
| PshBI | ATTAAT | 1 cut(s) | 741 |
| PsiI | TTATAA | 1 cut(s) | 750 |
| Psp124BI | GAGCTC | 1 cut(s) | 136 |
| Psp6I | CCWGG | 2 cut(s) | 231, 307 |
| PspCI | CACGTG | 1 cut(s) | 911 |
| PspGI | CCWGG | 2 cut(s) | 231, 307 |
| PspN4I | GGNNCC | 4 cut(s) | 477, 572, 790, 949 |
| PspPI | GGNCC | 4 cut(s) | 62, 189, 948, 1132 |
| PvuII | CAGCTG | 1 cut(s) | 1142 |
| RsaI | GTAC | 6 cut(s) | 440, 618, 924, 930, 1006, 1030 |
| RsaNI | GTAC | 6 cut(s) | 439, 617, 923, 929, 1005, 1029 |
| RseI | CAYNNNNRTG | 2 cut(s) | 828, 1298 |
| SacI | GAGCTC | 1 cut(s) | 136 |
| SapI | GCTCTTC | 2 cut(s) | 234, 885 |
| SaqAI | TTAA | 3 cut(s) | 666, 741, 848 |
| Sau96I | GGNCC | 4 cut(s) | 62, 189, 948, 1132 |
| ScaI | AGTACT | 1 cut(s) | 1006 |
| SchI | GAGTC | 1 cut(s) | 741 |
| ScrFI | CCNGG | 4 cut(s) | 233, 309, 920, 952 |
| SduI | GDGCHC | 3 cut(s) | 136, 835, 916 |
| SfaNI | GCATC | 4 cut(s) | 23, 29, 387, 1255 |
| SfoI | GGCGCC | 1 cut(s) | 790 |
| SinI | GGWCC | 3 cut(s) | 189, 948, 1132 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 828, 1298 |
| SmlI | CTYRAG | 1 cut(s) | 847 |
| SmoI | CTYRAG | 1 cut(s) | 847 |
| SpeI | ACTAGT | 2 cut(s) | 613, 925 |
| Sse9I | AATT | 6 cut(s) | 526, 667, 751, 795, 965, 1118 |
| SseBI | AGGCCT | 2 cut(s) | 205, 867 |
| SsiI | CCGC | 9 cut(s) | 165, 479, 653, 786, 905, 939, 945, 1135, 1164 |
| SspDI | GGCGCC | 1 cut(s) | 788 |
| SspI | AATATT | 2 cut(s) | 427, 725 |
| SspMI | CTAG | 5 cut(s) | 614, 639, 828, 926, 1002 |
| SstI | GAGCTC | 1 cut(s) | 136 |
| StuI | AGGCCT | 2 cut(s) | 205, 867 |
| StyD4I | CCNGG | 4 cut(s) | 231, 307, 918, 950 |
| StyI | CCWWGG | 3 cut(s) | 65, 548, 769 |
| TaaI | ACNGT | 2 cut(s) | 994, 1180 |
| TaiI | ACGT | 2 cut(s) | 913, 959 |
| TaqI | TCGA | 1 cut(s) | 381 |
| TasI | AATT | 6 cut(s) | 526, 667, 751, 795, 965, 1118 |
| TatI | WGTACW | 3 cut(s) | 438, 616, 1004 |
| TauI | GCSGC | 3 cut(s) | 789, 907, 942 |
| TfiI | GAWTC | 2 cut(s) | 544, 1234 |
| Tru1I | TTAA | 3 cut(s) | 666, 741, 848 |
| Tru9I | TTAA | 3 cut(s) | 666, 741, 848 |
| TscAI | CASTG | 1 cut(s) | 1183 |
| TseI | GCWGC | 9 cut(s) | 45, 507, 510, 633, 659, 942, 1069, 1142, 1166 |
| TspGWI | ACGGA | 1 cut(s) | 332 |
| TspRI | CASTG | 1 cut(s) | 1183 |
| Vha464I | CTTAAG | 1 cut(s) | 847 |
| VneI | GTGCAC | 1 cut(s) | 912 |
| VpaK11BI | GGWCC | 3 cut(s) | 189, 948, 1132 |
| VspI | ATTAAT | 1 cut(s) | 741 |
| XceI | RCATGY | 1 cut(s) | 507 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 269, 1177 |
| XspI | CTAG | 5 cut(s) | 614, 639, 828, 926, 1002 |
| ZraI | GACGTC | 1 cut(s) | 957 |
| ZrmI | AGTACT | 1 cut(s) | 1006 |