Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0029052

Physical Location & Seq

Genomic Coordinates Reverse (-)

459195 .. 459581

Gene Structure 387 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G009200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 387 bp

ATGCGTTCTCACTGGCTCCTCCTAGCACTGATTGGCCTCCTCCTTCCTCTGATGCTCTTGGCTGCTACTCCTCCGCGGGCTATTCCTGGCGGTTTGAAGCGCATACCCAAAGAGAACATCGGTGACCCTCGTCTGAAGTTGATGGCAGAGTTCGCGGTGTCCATGTACAACCTGCGAACCCACAAGAAGTTGGTCGTTGAGAGGGTCATCCGCGGAGAGACCCAGATGGTCGCGGGCCAGAACTATCAGCTTGTCGTTTTGGCCAAGGATGGATCGTTGCCTAACTCCACCGCAGGTTTTAATCATGCACATTATGAGCTCAGTGTGTGTGAGCAGTCTTGGAAGGATCTTTGGAAATTGAACTCTTTTCGTCAACTTTACAACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002020 GO:0003674 GO:0004857 GO:0004866 GO:0004869 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0006950 GO:0008150 GO:0009266 GO:0009408 GO:0009628 GO:0009892 GO:0009987 GO:0010029 GO:0010030 GO:0010466 GO:0010605 GO:0010951 GO:0019222 GO:0019899 GO:0030162 GO:0030234 GO:0030312 GO:0030414 GO:0031323 GO:0031324 GO:0032268 GO:0032269 GO:0033554 GO:0034605 GO:0043086 GO:0044092 GO:0044464 GO:0045861 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051172 GO:0051239 GO:0051240 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0061134 GO:0061135 GO:0065007 GO:0065009 GO:0071944 GO:0080090 GO:0098772 GO:1900140 GO:2000026 GO:2000116 GO:2000117

KEGG Pathways

Metabolic & Signaling

ko04970 map04970

Pfam Domains

Protein Families

SQAPI

Protein Analysis

129

Amino Acids

14.52

Weight (kDa)

9.86

Isoelectric Point (pI)

34.82

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0029052)

Species	Orthologous Gene IDs
prunus_persica	Prupe.4G009200_v2.0.a1 Prupe.7G005600_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	180, 284
AccII	CGCG	4 cut(s)	76, 155, 213, 233
AciI	CCGC	8 cut(s)	74, 76, 90, 155, 211, 213, 233, 291
AclWI	GGATC	2 cut(s)	280, 354
AcoI	YGGCCR	1 cut(s)	261
AcuI	CTGAAG	1 cut(s)	155
AfaI	GTAC	1 cut(s)	167
AgsI	TTSAA	2 cut(s)	97, 361
AjnI	CCWGG	1 cut(s)	85
AluBI	AGCT	2 cut(s)	250, 319
AluI	AGCT	2 cut(s)	250, 319
Alw21I	GWGCWC	1 cut(s)	321
Alw26I	GTCTC	1 cut(s)	212
AlwI	GGATC	2 cut(s)	280, 354
AoxI	GGCC	3 cut(s)	34, 235, 261
ApeKI	GCWGC	1 cut(s)	62
AspLEI	GCGC	1 cut(s)	102
AspS9I	GGNCC	1 cut(s)	235
AsuHPI	GGTGA	1 cut(s)	134
BalI	TGGCCA	1 cut(s)	263
BanII	GRGCYC	1 cut(s)	321
Bbv12I	GWGCWC	1 cut(s)	321
BbvI	GCAGC	1 cut(s)	49
BccI	CCATC	3 cut(s)	136, 220, 263
BciT130I	CCWGG	1 cut(s)	87
BcoDI	GTCTC	1 cut(s)	212
BfaI	CTAG	1 cut(s)	23
BfuAI	ACCTGC	2 cut(s)	180, 284
BisI	GCNGC	1 cut(s)	63
BlsI	GCNGC	1 cut(s)	64
Bme1390I	CCNGG	1 cut(s)	87
BmgT120I	GGNCC	1 cut(s)	235
BmiI	GGNNCC	1 cut(s)	17
BmrFI	CCNGG	1 cut(s)	87
BmsI	GCATC	1 cut(s)	42
BoxI	GACNNNNGTC	1 cut(s)	129
BsaI	GGTCTC	1 cut(s)	212
BsaJI	CCNNGG	3 cut(s)	74, 211, 264
Bse1I	ACTGG	1 cut(s)	17
BseBI	CCWGG	1 cut(s)	87
BseDI	CCNNGG	3 cut(s)	74, 211, 264
BseGI	GGATG	2 cut(s)	207, 274
BseMII	CTCAG	1 cut(s)	334
BseNI	ACTGG	1 cut(s)	17
BseRI	GAGGAG	3 cut(s)	8, 29, 60
BseXI	GCAGC	1 cut(s)	49
Bsh1236I	CGCG	4 cut(s)	76, 155, 213, 233
BshFI	GGCC	3 cut(s)	36, 237, 263
BsiHKAI	GWGCWC	1 cut(s)	321
BsmAI	GTCTC	1 cut(s)	212
BsnI	GGCC	3 cut(s)	36, 237, 263
Bso31I	GGTCTC	1 cut(s)	212
Bsp1286I	GDGCHC	1 cut(s)	321
Bsp1407I	TGTACA	1 cut(s)	165
Bsp143I	GATC	2 cut(s)	272, 346
BspACI	CCGC	8 cut(s)	74, 76, 90, 155, 211, 213, 233, 291
BspANI	GGCC	3 cut(s)	36, 237, 263
BspCNI	CTCAG	1 cut(s)	333
BspFNI	CGCG	4 cut(s)	76, 155, 213, 233
BspLI	GGNNCC	1 cut(s)	17
BspMI	ACCTGC	2 cut(s)	180, 284
BspPI	GGATC	2 cut(s)	280, 354
BspTNI	GGTCTC	1 cut(s)	212
BsrGI	TGTACA	1 cut(s)	165
BsrI	ACTGG	1 cut(s)	17
BssECI	CCNNGG	3 cut(s)	74, 211, 264
BssMI	GATC	2 cut(s)	272, 346
BssT1I	CCWWGG	1 cut(s)	264
Bst2UI	CCWGG	1 cut(s)	87
BstAUI	TGTACA	1 cut(s)	165
BstC8I	GCNNGC	2 cut(s)	78, 235
BstDEI	CTNAG	1 cut(s)	320
BstDSI	CCRYGG	2 cut(s)	74, 211
BstEII	GGTNACC	1 cut(s)	122
BstF5I	GGATG	2 cut(s)	207, 274
BstFNI	CGCG	4 cut(s)	76, 155, 213, 233
BstHHI	GCGC	1 cut(s)	102
BstKTI	GATC	2 cut(s)	275, 349
BstMAI	GTCTC	1 cut(s)	212
BstMBI	GATC	2 cut(s)	272, 346
BstMWI	GCNNNNNNNGC	1 cut(s)	152
BstNI	CCWGG	1 cut(s)	87
BstPAI	GACNNNNGTC	1 cut(s)	129
BstPI	GGTNACC	1 cut(s)	122
BstSCI	CCNGG	1 cut(s)	85
BstUI	CGCG	4 cut(s)	76, 155, 213, 233
BstV1I	GCAGC	1 cut(s)	49
BstX2I	RGATCY	1 cut(s)	346
BstYI	RGATCY	1 cut(s)	346
BsuRI	GGCC	3 cut(s)	36, 237, 263
BtgI	CCRYGG	2 cut(s)	74, 211
BtsCI	GGATG	2 cut(s)	207, 274
BtsIMutI	CAGTG	3 cut(s)	10, 26, 328
BveI	ACCTGC	2 cut(s)	180, 284
Cac8I	GCNNGC	2 cut(s)	78, 235
CfoI	GCGC	1 cut(s)	102
Cfr13I	GGNCC	1 cut(s)	235
Cfr42I	CCGCGG	2 cut(s)	77, 214
Csp6I	GTAC	1 cut(s)	166
CviAII	CATG	2 cut(s)	163, 305
CviJI	RGCY	8 cut(s)	16, 36, 62, 80, 237, 250, 263, 319
CviKI_1	RGCY	8 cut(s)	16, 36, 62, 80, 237, 250, 263, 319
CviQI	GTAC	1 cut(s)	166
DdeI	CTNAG	1 cut(s)	320
DpnI	GATC	2 cut(s)	274, 348
DpnII	GATC	2 cut(s)	272, 346
EaeI	YGGCCR	1 cut(s)	261
Ecl136II	GAGCTC	1 cut(s)	319
Eco130I	CCWWGG	1 cut(s)	264
Eco24I	GRGCYC	1 cut(s)	321
Eco31I	GGTCTC	1 cut(s)	212
Eco53kI	GAGCTC	1 cut(s)	319
Eco57I	CTGAAG	1 cut(s)	155
Eco91I	GGTNACC	1 cut(s)	122
EcoICRI	GAGCTC	1 cut(s)	319
EcoO65I	GGTNACC	1 cut(s)	122
EcoRII	CCWGG	1 cut(s)	85
EcoT14I	CCWWGG	1 cut(s)	264
EcoT38I	GRGCYC	1 cut(s)	321
ErhI	CCWWGG	1 cut(s)	264
FaeI	CATG	2 cut(s)	166, 308
FaiI	YATR	4 cut(s)	104, 164, 306, 315
FatI	CATG	2 cut(s)	162, 304
FauI	CCCGC	2 cut(s)	69, 226
Fnu4HI	GCNGC	1 cut(s)	63
FokI	GGATG	2 cut(s)	194, 281
FriOI	GRGCYC	1 cut(s)	321
Fsp4HI	GCNGC	1 cut(s)	63
FspBI	CTAG	1 cut(s)	23
GlaI	GCGC	1 cut(s)	101
GluI	GCNGC	1 cut(s)	63
HaeIII	GGCC	3 cut(s)	36, 237, 263
HhaI	GCGC	1 cut(s)	102
Hin1II	CATG	2 cut(s)	166, 308
Hin6I	GCGC	1 cut(s)	100
HinP1I	GCGC	1 cut(s)	100
HincII	GTYRAC	1 cut(s)	374
HindII	GTYRAC	1 cut(s)	374
HphI	GGTGA	1 cut(s)	134
Hpy166II	GTNNAC	1 cut(s)	374
Hpy188I	TCNGA	2 cut(s)	51, 135
Hpy8I	GTNNAC	1 cut(s)	374
HpyAV	CCTTC	2 cut(s)	53, 337
HpyCH4V	TGCA	1 cut(s)	308
HpyF10VI	GCNNNNNNNGC	1 cut(s)	152
HpyF3I	CTNAG	1 cut(s)	320
Hsp92II	CATG	2 cut(s)	166, 308
HspAI	GCGC	1 cut(s)	100
KspI	CCGCGG	2 cut(s)	77, 214
Kzo9I	GATC	2 cut(s)	272, 346
LmnI	GCTCC	1 cut(s)	21
LpnPI	CCDG	6 cut(s)	72, 99, 185, 236, 251, 279
Lsp1109I	GCAGC	1 cut(s)	49
LweI	GCATC	1 cut(s)	42
MaeI	CTAG	1 cut(s)	23
MaeIII	GTNAC	1 cut(s)	122
MalI	GATC	2 cut(s)	274, 348
MboI	GATC	2 cut(s)	272, 346
MflI	RGATCY	1 cut(s)	346
MhlI	GDGCHC	1 cut(s)	321
MlsI	TGGCCA	1 cut(s)	263
MluCI	AATT	1 cut(s)	356
MluNI	TGGCCA	1 cut(s)	263
MnlI	CCTC	7 cut(s)	29, 47, 50, 57, 81, 138, 195
Mox20I	TGGCCA	1 cut(s)	263
MscI	TGGCCA	1 cut(s)	263
MseI	TTAA	1 cut(s)	300
Msp20I	TGGCCA	1 cut(s)	263
MspA1I	CMGCKG	2 cut(s)	76, 213
MspR9I	CCNGG	1 cut(s)	87
MvaI	CCWGG	1 cut(s)	87
MvnI	CGCG	4 cut(s)	76, 155, 213, 233
MwoI	GCNNNNNNNGC	1 cut(s)	152
NdeII	GATC	2 cut(s)	272, 346
NlaIII	CATG	2 cut(s)	166, 308
NlaIV	GGNNCC	1 cut(s)	17
NmuCI	GTSAC	1 cut(s)	122
PkrI	GCNGC	1 cut(s)	64
PshAI	GACNNNNGTC	1 cut(s)	129
Psp124BI	GAGCTC	1 cut(s)	321
Psp6I	CCWGG	1 cut(s)	85
PspEI	GGTNACC	1 cut(s)	122
PspGI	CCWGG	1 cut(s)	85
PspN4I	GGNNCC	1 cut(s)	17
PspPI	GGNCC	1 cut(s)	235
PsuI	RGATCY	1 cut(s)	346
RsaI	GTAC	1 cut(s)	167
RsaNI	GTAC	1 cut(s)	166
SacI	GAGCTC	1 cut(s)	321
SacII	CCGCGG	2 cut(s)	77, 214
SaqAI	TTAA	1 cut(s)	300
SatI	GCNGC	1 cut(s)	63
Sau3AI	GATC	2 cut(s)	272, 346
Sau96I	GGNCC	1 cut(s)	235
ScrFI	CCNGG	1 cut(s)	87
SduI	GDGCHC	1 cut(s)	321
SetI	ASST	4 cut(s)	174, 252, 298, 321
SfaNI	GCATC	1 cut(s)	42
Sfr303I	CCGCGG	2 cut(s)	77, 214
SgrBI	CCGCGG	2 cut(s)	77, 214
Sse9I	AATT	1 cut(s)	356
SsiI	CCGC	8 cut(s)	74, 76, 90, 155, 211, 213, 233, 291
SspMI	CTAG	1 cut(s)	23
SstI	GAGCTC	1 cut(s)	321
StyD4I	CCNGG	1 cut(s)	85
StyI	CCWWGG	1 cut(s)	264
TasI	AATT	1 cut(s)	356
TatI	WGTACW	1 cut(s)	165
Tru1I	TTAA	1 cut(s)	300
Tru9I	TTAA	1 cut(s)	300
TscAI	CASTG	3 cut(s)	17, 33, 328
TseFI	GTSAC	1 cut(s)	122
TseI	GCWGC	1 cut(s)	62
Tsp45I	GTSAC	1 cut(s)	122
TspRI	CASTG	3 cut(s)	17, 33, 328
XspI	CTAG	1 cut(s)	23

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.