Prupe.4G066800_v2.0.a1

LRR receptor-like serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
3226879 .. 3227542
664 bp
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UTR
Exon/CDS
Intron
Prupe.4G066800.1

Sequence Viewer

Length: 324 bp
ATGCCGCCTAGGCCGATTTTTCGTAAAGCAGAGTATGGATTGGAAGGAATGGTTTCAACAAGAGGGGATGTGTACAGTTTTGGAATCGTAGTGATGGAAACATTGACAAGAAGGAAGCCACCAGATGAGATGTTTGTTGGGGAAATGAATTTAAAGCAATGGATTGCAAACTCACTATTACCAGATGCAATGATAGATGAAGTTGTGGATGCCAATTTTCTTACTTGGTGTGGTTGCTGCTGCAAGCCTGCAACTACGGCCTCTTGGGTGCTTTGCCGCTGCTTTGTTAAGAATATTTGTTTTTCTATTTATTATGTTTATTGA

Protein Analysis

108

Amino Acids

12.25

Weight (kDa)

6.19

Isoelectric Point (pI)

20.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024547)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 5, 277
AcsI RAATTY 1 cut(s) 148
AfaI GTAC 1 cut(s) 74
AgsI TTSAA 1 cut(s) 57
AoxI GGCC 2 cut(s) 11, 258
ApeKI GCWGC 3 cut(s) 237, 240, 279
ApoI RAATTY 1 cut(s) 148
Asp700I GAANNNNTTC 1 cut(s) 52
AspA2I CCTAGG 1 cut(s) 8
AvrII CCTAGG 1 cut(s) 8
BbvI GCAGC 3 cut(s) 224, 227, 266
BccI CCATC 1 cut(s) 88
BceAI ACGGC 1 cut(s) 273
BfaI CTAG 1 cut(s) 9
BglI GCCNNNNNGGC 1 cut(s) 10
BisI GCNGC 5 cut(s) 5, 238, 241, 277, 280
BlnI CCTAGG 1 cut(s) 8
BlsI GCNGC 5 cut(s) 6, 239, 242, 278, 281
BmsI GCATC 2 cut(s) 175, 199
BsaJI CCNNGG 1 cut(s) 8
Bse3DI GCAATG 2 cut(s) 164, 195
BseDI CCNNGG 1 cut(s) 8
BseGI GGATG 2 cut(s) 73, 214
BseMI GCAATG 2 cut(s) 164, 195
BseXI GCAGC 3 cut(s) 224, 227, 266
BshFI GGCC 2 cut(s) 13, 260
BsnI GGCC 2 cut(s) 13, 260
Bsp1407I TGTACA 1 cut(s) 72
BspACI CCGC 2 cut(s) 5, 277
BspANI GGCC 2 cut(s) 13, 260
BsrDI GCAATG 2 cut(s) 164, 195
BsrGI TGTACA 1 cut(s) 72
BssECI CCNNGG 1 cut(s) 8
BssT1I CCWWGG 1 cut(s) 8
Bst4CI ACNGT 1 cut(s) 77
BstAUI TGTACA 1 cut(s) 72
BstC8I GCNNGC 2 cut(s) 245, 249
BstF5I GGATG 2 cut(s) 73, 214
BstMWI GCNNNNNNNGC 2 cut(s) 10, 257
BstV1I GCAGC 3 cut(s) 224, 227, 266
BsuRI GGCC 2 cut(s) 13, 260
BtsCI GGATG 2 cut(s) 73, 214
Cac8I GCNNGC 2 cut(s) 245, 249
Csp6I GTAC 1 cut(s) 73
CviJI RGCY 4 cut(s) 13, 118, 247, 260
CviKI_1 RGCY 4 cut(s) 13, 118, 247, 260
CviQI GTAC 1 cut(s) 73
DraI TTTAAA 1 cut(s) 153
Eco130I CCWWGG 1 cut(s) 8
EcoT14I CCWWGG 1 cut(s) 8
ErhI CCWWGG 1 cut(s) 8
FaiI YATR 2 cut(s) 36, 315
Fnu4HI GCNGC 5 cut(s) 5, 238, 241, 277, 280
FokI GGATG 2 cut(s) 80, 221
Fsp4HI GCNGC 5 cut(s) 5, 238, 241, 277, 280
FspBI CTAG 1 cut(s) 9
GluI GCNGC 5 cut(s) 5, 238, 241, 277, 280
HaeIII GGCC 2 cut(s) 13, 260
HinfI GANTC 1 cut(s) 84
Hpy166II GTNNAC 1 cut(s) 73
Hpy8I GTNNAC 1 cut(s) 73
HpyAV CCTTC 2 cut(s) 38, 105
HpyCH4III ACNGT 1 cut(s) 77
HpyCH4V TGCA 4 cut(s) 167, 188, 243, 251
HpyF10VI GCNNNNNNNGC 2 cut(s) 10, 257
LpnPI CCDG 3 cut(s) 135, 195, 261
Lsp1109I GCAGC 3 cut(s) 224, 227, 266
LweI GCATC 2 cut(s) 175, 199
MaeI CTAG 1 cut(s) 9
MluCI AATT 2 cut(s) 148, 214
MnlI CCTC 2 cut(s) 56, 271
MroXI GAANNNNTTC 1 cut(s) 52
MseI TTAA 2 cut(s) 152, 288
MspA1I CMGCKG 1 cut(s) 279
MwoI GCNNNNNNNGC 2 cut(s) 10, 257
PdmI GAANNNNTTC 1 cut(s) 52
PfeI GAWTC 1 cut(s) 84
PkrI GCNGC 5 cut(s) 6, 239, 242, 278, 281
RsaI GTAC 1 cut(s) 74
RsaNI GTAC 1 cut(s) 73
SaqAI TTAA 2 cut(s) 152, 288
SatI GCNGC 5 cut(s) 5, 238, 241, 277, 280
SfaNI GCATC 2 cut(s) 175, 199
SgeI CNNG 9 cut(s) 21, 72, 120, 134, 194, 237, 256, 260, 276
Sse9I AATT 2 cut(s) 148, 214
SsiI CCGC 2 cut(s) 5, 277
SspI AATATT 1 cut(s) 295
SspMI CTAG 1 cut(s) 9
StyI CCWWGG 1 cut(s) 8
TaaI ACNGT 1 cut(s) 77
TasI AATT 2 cut(s) 148, 214
TatI WGTACW 1 cut(s) 72
TauI GCSGC 2 cut(s) 7, 279
TfiI GAWTC 1 cut(s) 84
Tru1I TTAA 2 cut(s) 152, 288
Tru9I TTAA 2 cut(s) 152, 288
TseI GCWGC 3 cut(s) 237, 240, 279
TspDTI ATGAA 2 cut(s) 161, 213
XapI RAATTY 1 cut(s) 148
XmaJI CCTAGG 1 cut(s) 8
XmnI GAANNNNTTC 1 cut(s) 52
XspI CTAG 1 cut(s) 9
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.