RuBisCO catalyzes two reactions the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate. Both reactions occur simultaneously and in competition at the same active site
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD13G1041900.v1.1 |
| prunus_persica | Prupe.4G198400_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 189 |
| AciI | CCGC | 2 cut(s) | 103, 187 |
| AcoI | YGGCCR | 1 cut(s) | 78 |
| AcsI | RAATTY | 1 cut(s) | 128 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 20 |
| AgsI | TTSAA | 2 cut(s) | 28, 224 |
| Alw26I | GTCTC | 1 cut(s) | 32 |
| AoxI | GGCC | 2 cut(s) | 11, 78 |
| ApoI | RAATTY | 1 cut(s) | 128 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 32 |
| AspLEI | GCGC | 1 cut(s) | 145 |
| BalI | TGGCCA | 1 cut(s) | 80 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 81, 113 |
| BcoDI | GTCTC | 1 cut(s) | 32 |
| BfaI | CTAG | 1 cut(s) | 244 |
| BmiI | GGNNCC | 1 cut(s) | 117 |
| BmrI | ACTGGG | 1 cut(s) | 121 |
| BmuI | ACTGGG | 1 cut(s) | 121 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 29, 61 |
| BsaJI | CCNNGG | 2 cut(s) | 81, 123 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 20 |
| Bse1I | ACTGG | 1 cut(s) | 116 |
| BseDI | CCNNGG | 2 cut(s) | 81, 123 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 20 |
| BseMII | CTCAG | 1 cut(s) | 227 |
| BseNI | ACTGG | 1 cut(s) | 116 |
| BshFI | GGCC | 2 cut(s) | 13, 80 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 20 |
| BsmAI | GTCTC | 1 cut(s) | 32 |
| BsnI | GGCC | 2 cut(s) | 13, 80 |
| BspACI | CCGC | 2 cut(s) | 103, 187 |
| BspANI | GGCC | 2 cut(s) | 13, 80 |
| BspCNI | CTCAG | 1 cut(s) | 226 |
| BspLI | GGNNCC | 1 cut(s) | 117 |
| BsrBI | CCGCTC | 1 cut(s) | 189 |
| BsrI | ACTGG | 1 cut(s) | 116 |
| BssECI | CCNNGG | 2 cut(s) | 81, 123 |
| BssT1I | CCWWGG | 2 cut(s) | 81, 123 |
| BstDEI | CTNAG | 1 cut(s) | 213 |
| BstHHI | GCGC | 1 cut(s) | 145 |
| BstMAI | GTCTC | 1 cut(s) | 32 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 10, 195 |
| BsuRI | GGCC | 2 cut(s) | 13, 80 |
| CfoI | GCGC | 1 cut(s) | 145 |
| CviJI | RGCY | 4 cut(s) | 13, 80, 183, 198 |
| CviKI_1 | RGCY | 4 cut(s) | 13, 80, 183, 198 |
| DdeI | CTNAG | 1 cut(s) | 213 |
| EaeI | YGGCCR | 1 cut(s) | 78 |
| Eco130I | CCWWGG | 2 cut(s) | 81, 123 |
| EcoT14I | CCWWGG | 2 cut(s) | 81, 123 |
| ErhI | CCWWGG | 2 cut(s) | 81, 123 |
| FaiI | YATR | 1 cut(s) | 165 |
| FspBI | CTAG | 1 cut(s) | 244 |
| GlaI | GCGC | 1 cut(s) | 144 |
| HaeIII | GGCC | 2 cut(s) | 13, 80 |
| HhaI | GCGC | 1 cut(s) | 145 |
| Hin6I | GCGC | 1 cut(s) | 143 |
| HinP1I | GCGC | 1 cut(s) | 143 |
| HinfI | GANTC | 2 cut(s) | 40, 71 |
| Hpy188I | TCNGA | 2 cut(s) | 193, 216 |
| Hpy188III | TCNNGA | 1 cut(s) | 37 |
| HpyAV | CCTTC | 2 cut(s) | 62, 107 |
| HpyCH4V | TGCA | 1 cut(s) | 167 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 10, 195 |
| HpyF3I | CTNAG | 1 cut(s) | 213 |
| HspAI | GCGC | 1 cut(s) | 143 |
| LmnI | GCTCC | 1 cut(s) | 194 |
| LpnPI | CCDG | 1 cut(s) | 97 |
| MaeI | CTAG | 1 cut(s) | 244 |
| MbiI | CCGCTC | 1 cut(s) | 189 |
| MboII | GAAGA | 2 cut(s) | 40, 245 |
| MfeI | CAATTG | 1 cut(s) | 18 |
| MlsI | TGGCCA | 1 cut(s) | 80 |
| MluCI | AATT | 2 cut(s) | 18, 128 |
| MluNI | TGGCCA | 1 cut(s) | 80 |
| MlyI | GAGTC | 2 cut(s) | 34, 80 |
| MnlI | CCTC | 3 cut(s) | 24, 66, 194 |
| Mox20I | TGGCCA | 1 cut(s) | 80 |
| MroXI | GAANNNNTTC | 1 cut(s) | 32 |
| MscI | TGGCCA | 1 cut(s) | 80 |
| Msp20I | TGGCCA | 1 cut(s) | 80 |
| MunI | CAATTG | 1 cut(s) | 18 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 10, 195 |
| NlaIV | GGNNCC | 1 cut(s) | 117 |
| NmeAIII | GCCGAG | 1 cut(s) | 94 |
| PdmI | GAANNNNTTC | 1 cut(s) | 32 |
| PleI | GAGTC | 2 cut(s) | 34, 79 |
| PpsI | GAGTC | 2 cut(s) | 34, 79 |
| PspN4I | GGNNCC | 1 cut(s) | 117 |
| SchI | GAGTC | 2 cut(s) | 34, 80 |
| SetI | ASST | 3 cut(s) | 54, 99, 125 |
| SgeI | CNNG | 8 cut(s) | 17, 49, 82, 94, 124, 136, 180, 192 |
| Sse9I | AATT | 2 cut(s) | 18, 128 |
| SsiI | CCGC | 2 cut(s) | 103, 187 |
| SspMI | CTAG | 1 cut(s) | 244 |
| StyI | CCWWGG | 2 cut(s) | 81, 123 |
| TaqI | TCGA | 1 cut(s) | 36 |
| TasI | AATT | 2 cut(s) | 18, 128 |
| XapI | RAATTY | 1 cut(s) | 128 |
| XmnI | GAANNNNTTC | 1 cut(s) | 32 |
| XspI | CTAG | 1 cut(s) | 244 |