Prupe.4G272200_v2.0.a1

plant mutator transposase zinc finger

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
22389529 .. 22391343
1815 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G272200.1

Sequence Viewer

Length: 270 bp
ATGAATGCACCATCCTTCTTCATATCCAACGCTACCGCAATCATCTCCGTCTCAATCTTCGTCGACCGACGACACACCTCCAGTTCCTTCTCCAGCATCGTCGAATCTGAGCGACGTCAACCACAACAACTTCAACGCATACGGAAGGTATTTCGTTTTGCCTTTGCGATTGTTTCTGGTGAAACTGTGAACAATTGGAGGTGGTTTCTGCAAAAGATATCGGATGTCTTATTGGGCTTTTTTTTGGGTTTTTTGAGTTTTTTTGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

90

Amino Acids

10.33

Weight (kDa)

11.54

Isoelectric Point (pI)

53.28

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0024525)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 118
AccI GTMKAC 1 cut(s) 63
AciI CCGC 1 cut(s) 36
AcyI GRCGYC 1 cut(s) 115
AgsI TTSAA 1 cut(s) 134
Alw26I GTCTC 1 cut(s) 55
AsuHPI GGTGA 1 cut(s) 191
BccI CCATC 1 cut(s) 19
BcoDI GTCTC 1 cut(s) 55
BmsI GCATC 1 cut(s) 105
BpmI CTGGAG 2 cut(s) 64, 76
BsaHI GRCGYC 1 cut(s) 115
Bse1I ACTGG 1 cut(s) 81
BseGI GGATG 2 cut(s) 11, 229
BseMII CTCAG 1 cut(s) 99
BseNI ACTGG 1 cut(s) 81
Bsh1285I CGRYCG 1 cut(s) 67
BsiEI CGRYCG 1 cut(s) 67
BsmAI GTCTC 1 cut(s) 55
BsmBI CGTCTC 1 cut(s) 55
BsmI GAATGC 1 cut(s) 10
BspACI CCGC 1 cut(s) 36
BspCNI CTCAG 1 cut(s) 100
BsrI ACTGG 1 cut(s) 81
BssNI GRCGYC 1 cut(s) 115
Bst4CI ACNGT 1 cut(s) 187
BstACI GRCGYC 1 cut(s) 115
BstDEI CTNAG 1 cut(s) 108
BstF5I GGATG 2 cut(s) 11, 229
BstMAI GTCTC 1 cut(s) 55
BstMCI CGRYCG 1 cut(s) 67
BtsCI GGATG 2 cut(s) 11, 229
CviJI RGCY 1 cut(s) 237
CviKI_1 RGCY 1 cut(s) 237
DdeI CTNAG 1 cut(s) 108
Eco32I GATATC 1 cut(s) 219
EcoRV GATATC 1 cut(s) 219
Esp3I CGTCTC 1 cut(s) 55
FaiI YATR 3 cut(s) 23, 140, 268
FblI GTMKAC 1 cut(s) 63
FokI GGATG 1 cut(s) 236
GsuI CTGGAG 2 cut(s) 64, 76
Hin1I GRCGYC 1 cut(s) 115
HincII GTYRAC 2 cut(s) 64, 119
HindII GTYRAC 2 cut(s) 64, 119
HinfI GANTC 1 cut(s) 104
HphI GGTGA 1 cut(s) 191
Hpy166II GTNNAC 3 cut(s) 64, 119, 190
Hpy188I TCNGA 2 cut(s) 109, 223
Hpy8I GTNNAC 3 cut(s) 64, 119, 190
Hpy99I CGWCG 4 cut(s) 65, 72, 104, 117
HpyAV CCTTC 3 cut(s) 25, 97, 139
HpyCH4III ACNGT 1 cut(s) 187
HpyCH4IV ACGT 1 cut(s) 115
HpyCH4V TGCA 2 cut(s) 8, 211
HpyF3I CTNAG 1 cut(s) 108
HpySE526I ACGT 1 cut(s) 115
Hsp92I GRCGYC 1 cut(s) 115
LpnPI CCDG 3 cut(s) 94, 106, 162
LweI GCATC 1 cut(s) 105
MaeII ACGT 1 cut(s) 115
MboII GAAGA 2 cut(s) 10, 49
MfeI CAATTG 1 cut(s) 193
MluCI AATT 1 cut(s) 193
MmeI TCCRAC 1 cut(s) 51
MnlI CCTC 2 cut(s) 88, 192
MunI CAATTG 1 cut(s) 193
Mva1269I GAATGC 1 cut(s) 10
PctI GAATGC 1 cut(s) 10
PfeI GAWTC 1 cut(s) 104
SalI GTCGAC 1 cut(s) 62
SetI ASST 4 cut(s) 80, 118, 150, 203
SfaNI GCATC 1 cut(s) 105
SgeI CNNG 3 cut(s) 93, 105, 189
Sse9I AATT 1 cut(s) 193
SsiI CCGC 1 cut(s) 36
TaaI ACNGT 1 cut(s) 187
TaiI ACGT 1 cut(s) 118
TaqI TCGA 2 cut(s) 63, 102
TaqII GACCGA 1 cut(s) 81
TasI AATT 1 cut(s) 193
TfiI GAWTC 1 cut(s) 104
TspDTI ATGAA 2 cut(s) 10, 17
TspGWI ACGGA 2 cut(s) 37, 157
XmiI GTMKAC 1 cut(s) 63
ZraI GACGTC 1 cut(s) 116
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.