Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0024557

Physical Location & Seq

Genomic Coordinates Forward (+)

5059972 .. 5062633

Gene Structure 2662 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G047900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 390 bp

ATGGAGGGGACTCCGAAAGACACAGTCAGTAGGTACAAGATCATGAACGGAAGAAAGTCCAAACAGAAATTGTTAGTTCAAGAGGCTGTATTAAGCATCAATGTTATCGAATTAGTGATTCACCAGATAATTAGCTTTATCAGAACTAAGGTTTTGATAGAGACCAATATTGACAGACACATTGGAATAAATGTGTGCTGTGTATTATACAACCTTGGGTCATGCTTCTCTCGGATAGATTTCAAAGGTAAAAATACTGCTATCCTAGAGAAGGACGATGAAATCATCTCTGCAGCATCTATAAGAATACATGGAACAAGGATGGCGGAGATGCCATTTGCGGCAACCCAACAGAAGTTTGGGAGAAAATTCGTAACTAGTTGCCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000785 GO:0003674 GO:0003676 GO:0003677 GO:0003682 GO:0003824 GO:0004386 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006325 GO:0006333 GO:0006338 GO:0006996 GO:0008150 GO:0009987 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031491 GO:0034728 GO:0035327 GO:0042623 GO:0042766 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043933 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0044877 GO:0051276 GO:0070615 GO:0071824 GO:0071840 GO:0097159 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acetyltransf_1 Jas PHD

Protein Analysis

130

Amino Acids

14.58

Weight (kDa)

9.47

Isoelectric Point (pI)

36.21

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0024557)

Species	Orthologous Gene IDs
prunus_persica	Prupe.5G047900_v2.0.a1 Prupe.5G047900_v2.0.a1 Prupe.5G047900_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	326, 341
AcsI	RAATTY	1 cut(s)	368
AfaI	GTAC	1 cut(s)	35
AfiI	CCNNNNNNNGG	1 cut(s)	271
AgsI	TTSAA	2 cut(s)	80, 244
AhlI	ACTAGT	1 cut(s)	377
AluBI	AGCT	1 cut(s)	135
AluI	AGCT	1 cut(s)	135
Alw26I	GTCTC	1 cut(s)	155
ApeKI	GCWGC	1 cut(s)	293
ApoI	RAATTY	1 cut(s)	368
AsuHPI	GGTGA	1 cut(s)	113
BbvI	GCAGC	1 cut(s)	305
BccI	CCATC	1 cut(s)	316
BcoDI	GTCTC	1 cut(s)	155
BcuI	ACTAGT	1 cut(s)	377
BfaI	CTAG	2 cut(s)	266, 378
BfmI	CTRYAG	1 cut(s)	291
BisI	GCNGC	2 cut(s)	294, 342
BlsI	GCNGC	2 cut(s)	295, 343
BmsI	GCATC	3 cut(s)	105, 305, 321
BsaI	GGTCTC	1 cut(s)	155
BsaJI	CCNNGG	1 cut(s)	214
Bsc4I	CCNNNNNNNGG	1 cut(s)	271
BseDI	CCNNGG	1 cut(s)	214
BseGI	GGATG	1 cut(s)	327
BseLI	CCNNNNNNNGG	1 cut(s)	271
BseXI	GCAGC	1 cut(s)	305
BslFI	GGGAC	1 cut(s)	22
BslI	CCNNNNNNNGG	1 cut(s)	271
BsmAI	GTCTC	1 cut(s)	155
BsmFI	GGGAC	1 cut(s)	22
Bso31I	GGTCTC	1 cut(s)	155
Bsp143I	GATC	1 cut(s)	39
BspACI	CCGC	2 cut(s)	326, 341
BspHI	TCATGA	1 cut(s)	42
BspMAI	CTGCAG	1 cut(s)	295
BspTNI	GGTCTC	1 cut(s)	155
BssECI	CCNNGG	1 cut(s)	214
BssMI	GATC	1 cut(s)	39
BssT1I	CCWWGG	1 cut(s)	214
Bst4CI	ACNGT	1 cut(s)	25
BstDEI	CTNAG	1 cut(s)	147
BstENI	CCTNNNNNAGG	1 cut(s)	269
BstF5I	GGATG	1 cut(s)	327
BstKTI	GATC	1 cut(s)	42
BstMAI	GTCTC	1 cut(s)	155
BstMBI	GATC	1 cut(s)	39
BstSFI	CTRYAG	1 cut(s)	291
BstV1I	GCAGC	1 cut(s)	305
BtsCI	GGATG	1 cut(s)	327
CciI	TCATGA	1 cut(s)	42
Csp6I	GTAC	1 cut(s)	34
CviAII	CATG	3 cut(s)	43, 222, 311
CviJI	RGCY	2 cut(s)	86, 135
CviKI_1	RGCY	2 cut(s)	86, 135
CviQI	GTAC	1 cut(s)	34
DdeI	CTNAG	1 cut(s)	147
DpnI	GATC	1 cut(s)	41
DpnII	GATC	1 cut(s)	39
EciI	GGCGGA	1 cut(s)	341
Eco130I	CCWWGG	1 cut(s)	214
Eco31I	GGTCTC	1 cut(s)	155
EcoNI	CCTNNNNNAGG	1 cut(s)	269
EcoT14I	CCWWGG	1 cut(s)	214
ErhI	CCWWGG	1 cut(s)	214
FaeI	CATG	3 cut(s)	46, 225, 314
FaiI	YATR	5 cut(s)	44, 208, 223, 302, 312
FaqI	GGGAC	1 cut(s)	22
FatI	CATG	3 cut(s)	42, 221, 310
Fnu4HI	GCNGC	2 cut(s)	294, 342
FokI	GGATG	1 cut(s)	334
Fsp4HI	GCNGC	2 cut(s)	294, 342
FspBI	CTAG	2 cut(s)	266, 378
GluI	GCNGC	2 cut(s)	294, 342
Hin1II	CATG	3 cut(s)	46, 225, 314
HinfI	GANTC	2 cut(s)	10, 118
HphI	GGTGA	1 cut(s)	113
Hpy188I	TCNGA	3 cut(s)	15, 143, 234
Hpy188III	TCNNGA	2 cut(s)	43, 80
HpyAV	CCTTC	1 cut(s)	265
HpyCH4III	ACNGT	1 cut(s)	25
HpyCH4V	TGCA	1 cut(s)	293
HpyF3I	CTNAG	1 cut(s)	147
Hsp92II	CATG	3 cut(s)	46, 225, 314
Kzo9I	GATC	1 cut(s)	39
LpnPI	CCDG	1 cut(s)	137
Lsp1109I	GCAGC	1 cut(s)	305
LweI	GCATC	3 cut(s)	105, 305, 321
MaeI	CTAG	2 cut(s)	266, 378
MaeIII	GTNAC	1 cut(s)	373
MalI	GATC	1 cut(s)	41
MboI	GATC	1 cut(s)	39
MboII	GAAGA	1 cut(s)	63
MluCI	AATT	4 cut(s)	68, 110, 129, 368
MlyI	GAGTC	1 cut(s)	4
MnlI	CCTC	1 cut(s)	76
MseI	TTAA	1 cut(s)	92
NdeII	GATC	1 cut(s)	39
NlaIII	CATG	3 cut(s)	46, 225, 314
PagI	TCATGA	1 cut(s)	42
PfeI	GAWTC	1 cut(s)	118
PflFI	GACNNNGTC	1 cut(s)	23
PkrI	GCNGC	2 cut(s)	295, 343
PleI	GAGTC	1 cut(s)	4
PpsI	GAGTC	1 cut(s)	4
PstI	CTGCAG	1 cut(s)	295
PsyI	GACNNNGTC	1 cut(s)	23
RsaI	GTAC	1 cut(s)	35
RsaNI	GTAC	1 cut(s)	34
SaqAI	TTAA	1 cut(s)	92
SatI	GCNGC	2 cut(s)	294, 342
Sau3AI	GATC	1 cut(s)	39
SchI	GAGTC	1 cut(s)	4
SetI	ASST	5 cut(s)	35, 137, 153, 216, 250
SfaNI	GCATC	3 cut(s)	105, 305, 321
SfcI	CTRYAG	1 cut(s)	291
SpeI	ACTAGT	1 cut(s)	377
Sse9I	AATT	4 cut(s)	68, 110, 129, 368
SsiI	CCGC	2 cut(s)	326, 341
SspI	AATATT	1 cut(s)	169
SspMI	CTAG	2 cut(s)	266, 378
StyI	CCWWGG	1 cut(s)	214
TaaI	ACNGT	1 cut(s)	25
TaqI	TCGA	1 cut(s)	108
TasI	AATT	4 cut(s)	68, 110, 129, 368
TauI	GCSGC	1 cut(s)	344
TfiI	GAWTC	1 cut(s)	118
Tru1I	TTAA	1 cut(s)	92
Tru9I	TTAA	1 cut(s)	92
TseI	GCWGC	1 cut(s)	293
TspDTI	ATGAA	2 cut(s)	59, 294
TspGWI	ACGGA	1 cut(s)	63
Tth111I	GACNNNGTC	1 cut(s)	23
XagI	CCTNNNNNAGG	1 cut(s)	269
XapI	RAATTY	1 cut(s)	368
XcmI	CCANNNNNNNNNTGG	1 cut(s)	356
XspI	CTAG	2 cut(s)	266, 378

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.