Prupe.5G073300_v2.0.a1

14 kDa proline-rich protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
8755743 .. 8756145
403 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G073300.1_v2.0.a1.CDS.1

Sequence Viewer

Length: 234 bp
ATGGCTTCAAAAACCACTGCCTCACTCCTCGCTCTCAATCTCCTTTTCTTTTCCCTTGTCAATGCAAACCCTAACCCTGCCCCTAATAGATTCCACCTCCTAGACCTCGAGGCTGCTGTGTGCCTCTGCACTGCCATCAAAGCCAGAATTTTGGGCATCAACCTCAACATCCCCGTTGCTATCAGCTTGCTTCTTAGTGCTTGTGGAGATAAAATATCATATAATTGCGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

78

Amino Acids

8.16

Weight (kDa)

8.47

Isoelectric Point (pI)

32.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029066)

Species Orthologous Gene IDs
prunus_persica Prupe.5G073300_v2.0.a1 Prupe.5G073400_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AbsI CCTCGAGG 1 cut(s) 107
AcsI RAATTY 1 cut(s) 147
AgsI TTSAA 1 cut(s) 9
AluBI AGCT 1 cut(s) 186
AluI AGCT 1 cut(s) 186
Ama87I CYCGRG 1 cut(s) 107
ApeKI GCWGC 1 cut(s) 113
ApoI RAATTY 1 cut(s) 147
AvaI CYCGRG 1 cut(s) 107
BbvI GCAGC 1 cut(s) 100
BccI CCATC 1 cut(s) 143
BfaI CTAG 1 cut(s) 101
BisI GCNGC 1 cut(s) 114
BlsI GCNGC 1 cut(s) 115
BmeT110I CYCGRG 1 cut(s) 107
BmsI GCATC 1 cut(s) 165
BseGI GGATG 1 cut(s) 168
BseRI GAGGAG 1 cut(s) 17
BseXI GCAGC 1 cut(s) 100
BsgI GTGCAG 1 cut(s) 112
BsiHKCI CYCGRG 1 cut(s) 107
BsoBI CYCGRG 1 cut(s) 107
BstC8I GCNNGC 1 cut(s) 188
BstDEI CTNAG 1 cut(s) 194
BstF5I GGATG 1 cut(s) 168
BstMWI GCNNNNNNNGC 1 cut(s) 140
BstV1I GCAGC 1 cut(s) 100
BstXI CCANNNNNNTGG 1 cut(s) 151
BtsCI GGATG 1 cut(s) 168
BtsI GCAGTG 2 cut(s) 15, 129
BtsIMutI CAGTG 2 cut(s) 15, 129
Cac8I GCNNGC 1 cut(s) 188
CviJI RGCY 4 cut(s) 5, 113, 143, 186
CviKI_1 RGCY 4 cut(s) 5, 113, 143, 186
DdeI CTNAG 1 cut(s) 194
Eco88I CYCGRG 1 cut(s) 107
FaiI YATR 2 cut(s) 220, 222
Fnu4HI GCNGC 1 cut(s) 114
FokI GGATG 1 cut(s) 155
Fsp4HI GCNGC 1 cut(s) 114
FspBI CTAG 1 cut(s) 101
GluI GCNGC 1 cut(s) 114
HinfI GANTC 1 cut(s) 90
HpyCH4V TGCA 2 cut(s) 65, 129
HpyF10VI GCNNNNNNNGC 1 cut(s) 140
HpyF3I CTNAG 1 cut(s) 194
LpnPI CCDG 2 cut(s) 90, 157
Lsp1109I GCAGC 1 cut(s) 100
LweI GCATC 1 cut(s) 165
MaeI CTAG 1 cut(s) 101
MluCI AATT 2 cut(s) 147, 223
MnlI CCTC 7 cut(s) 31, 38, 103, 107, 116, 134, 173
MwoI GCNNNNNNNGC 1 cut(s) 140
PaeR7I CTCGAG 1 cut(s) 107
PfeI GAWTC 1 cut(s) 90
PkrI GCNGC 1 cut(s) 115
PspXI VCTCGAGB 1 cut(s) 107
SatI GCNGC 1 cut(s) 114
SetI ASST 4 cut(s) 99, 108, 165, 188
SfaNI GCATC 1 cut(s) 165
Sfr274I CTCGAG 1 cut(s) 107
SlaI CTCGAG 1 cut(s) 107
SmlI CTYRAG 1 cut(s) 107
SmoI CTYRAG 1 cut(s) 107
Sse9I AATT 2 cut(s) 147, 223
SspMI CTAG 1 cut(s) 101
TaqI TCGA 1 cut(s) 108
TasI AATT 2 cut(s) 147, 223
TfiI GAWTC 1 cut(s) 90
TscAI CASTG 2 cut(s) 22, 136
TseI GCWGC 1 cut(s) 113
TspRI CASTG 2 cut(s) 22, 136
XapI RAATTY 1 cut(s) 147
XhoI CTCGAG 1 cut(s) 107
XspI CTAG 1 cut(s) 101
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.