Prupe.5G073400_v2.0.a1

14 kDa proline-rich protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
8758007 .. 8758369
363 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G073400.1

Sequence Viewer

Length: 264 bp
ATGGCTTCAAAAAGACCTGCACTTGCTCTCTTCCTGGCTGTCAACCTCCTTTTCTTTTCCCTTGTCAATGCCAACAACCCTAGCCCTGCCCCTAATAGAGTTGCCTGCCCTAGGGATGCCCTGAAATTAGGGGCTGCTGTGTGCCTTTGCACTTCCATTAACGCCAGAATTTTGGGCATCAACCTCAACATTCCCGTTGCTCTCAGCTTGCTTCTTAGTGCTTGTGGAGATAAGCTTCCAGATGGGTTCCAATGTTCCTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

88

Amino Acids

9.04

Weight (kDa)

9.07

Isoelectric Point (pI)

54.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029066)

Species Orthologous Gene IDs
prunus_persica Prupe.5G073300_v2.0.a1 Prupe.5G073400_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 25
AcsI RAATTY 1 cut(s) 168
AfiI CCNNNNNNNGG 1 cut(s) 111
AgsI TTSAA 1 cut(s) 9
AjnI CCWGG 1 cut(s) 33
AluBI AGCT 2 cut(s) 207, 235
AluI AGCT 2 cut(s) 207, 235
ApeKI GCWGC 1 cut(s) 134
ApoI RAATTY 1 cut(s) 168
AspA2I CCTAGG 1 cut(s) 110
AvrII CCTAGG 1 cut(s) 110
BbvI GCAGC 1 cut(s) 121
BccI CCATC 1 cut(s) 236
BciT130I CCWGG 1 cut(s) 35
BfaI CTAG 2 cut(s) 81, 111
BfuAI ACCTGC 1 cut(s) 25
BisI GCNGC 1 cut(s) 135
BlnI CCTAGG 1 cut(s) 110
BlsI GCNGC 1 cut(s) 136
Bme1390I CCNGG 1 cut(s) 35
BmiI GGNNCC 1 cut(s) 248
BmrFI CCNGG 1 cut(s) 35
BmsI GCATC 2 cut(s) 106, 186
BsaJI CCNNGG 1 cut(s) 110
Bsc4I CCNNNNNNNGG 1 cut(s) 111
BseBI CCWGG 1 cut(s) 35
BseDI CCNNGG 1 cut(s) 110
BseGI GGATG 1 cut(s) 121
BseLI CCNNNNNNNGG 1 cut(s) 111
BseMII CTCAG 1 cut(s) 217
BseXI GCAGC 1 cut(s) 121
BslI CCNNNNNNNGG 1 cut(s) 111
BspCNI CTCAG 1 cut(s) 216
BspLI GGNNCC 1 cut(s) 248
BspMI ACCTGC 1 cut(s) 25
BssECI CCNNGG 1 cut(s) 110
BssT1I CCWWGG 1 cut(s) 110
Bst2UI CCWGG 1 cut(s) 35
Bst6I CTCTTC 1 cut(s) 35
BstC8I GCNNGC 2 cut(s) 106, 209
BstDEI CTNAG 2 cut(s) 203, 215
BstENI CCTNNNNNAGG 1 cut(s) 109
BstF5I GGATG 1 cut(s) 121
BstNI CCWGG 1 cut(s) 35
BstSCI CCNGG 1 cut(s) 33
BstV1I GCAGC 1 cut(s) 121
BstXI CCANNNNNNTGG 1 cut(s) 172
BtsCI GGATG 1 cut(s) 121
BveI ACCTGC 1 cut(s) 25
Cac8I GCNNGC 2 cut(s) 106, 209
CviJI RGCY 6 cut(s) 5, 38, 84, 134, 207, 235
CviKI_1 RGCY 6 cut(s) 5, 38, 84, 134, 207, 235
DdeI CTNAG 2 cut(s) 203, 215
Eam1104I CTCTTC 1 cut(s) 35
EarI CTCTTC 1 cut(s) 35
Eco130I CCWWGG 1 cut(s) 110
EcoNI CCTNNNNNAGG 1 cut(s) 109
EcoRII CCWGG 1 cut(s) 33
EcoT14I CCWWGG 1 cut(s) 110
ErhI CCWWGG 1 cut(s) 110
FaiI YATR 1 cut(s) 262
Fnu4HI GCNGC 1 cut(s) 135
FokI GGATG 1 cut(s) 128
Fsp4HI GCNGC 1 cut(s) 135
FspBI CTAG 2 cut(s) 81, 111
GluI GCNGC 1 cut(s) 135
HincII GTYRAC 1 cut(s) 43
HindII GTYRAC 1 cut(s) 43
HindIII AAGCTT 1 cut(s) 233
Hpy166II GTNNAC 1 cut(s) 43
Hpy188III TCNNGA 1 cut(s) 239
Hpy8I GTNNAC 1 cut(s) 43
HpyCH4V TGCA 2 cut(s) 20, 150
HpyF3I CTNAG 2 cut(s) 203, 215
LpnPI CCDG 8 cut(s) 20, 30, 47, 99, 118, 134, 178, 252
Lsp1109I GCAGC 1 cut(s) 121
LweI GCATC 2 cut(s) 106, 186
MaeI CTAG 2 cut(s) 81, 111
MboII GAAGA 1 cut(s) 22
MluCI AATT 2 cut(s) 125, 168
MnlI CCTC 2 cut(s) 56, 194
MseI TTAA 1 cut(s) 159
MspR9I CCNGG 1 cut(s) 35
MvaI CCWGG 1 cut(s) 35
NlaIV GGNNCC 1 cut(s) 248
PkrI GCNGC 1 cut(s) 136
Psp6I CCWGG 1 cut(s) 33
PspGI CCWGG 1 cut(s) 33
PspN4I GGNNCC 1 cut(s) 248
SaqAI TTAA 1 cut(s) 159
SatI GCNGC 1 cut(s) 135
ScrFI CCNGG 1 cut(s) 35
SetI ASST 5 cut(s) 19, 48, 186, 209, 237
SfaNI GCATC 2 cut(s) 106, 186
Sse9I AATT 2 cut(s) 125, 168
SspMI CTAG 2 cut(s) 81, 111
StyD4I CCNGG 1 cut(s) 33
StyI CCWWGG 1 cut(s) 110
TasI AATT 2 cut(s) 125, 168
Tru1I TTAA 1 cut(s) 159
Tru9I TTAA 1 cut(s) 159
TseI GCWGC 1 cut(s) 134
XagI CCTNNNNNAGG 1 cut(s) 109
XapI RAATTY 1 cut(s) 168
XmaJI CCTAGG 1 cut(s) 110
XspI CTAG 2 cut(s) 81, 111
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.