Prupe.6G036100_v2.0.a1

GRF zinc finger containing protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
2725480 .. 2726267
788 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G036100.1

Sequence Viewer

Length: 198 bp
ATGAGGCGCGAGACATTGACCTCAAGTGATGGAAGAGCTGTGTTGGGGAGATGCTGTAAATGTCTAAAAGAGGCATTAATAAGGACATCGTGGACAGATTTAAACTCTAGAAGAAGAGAGGTCGACGGTGTGATTTGTAGAAGTGGGCAGACCCAGAAATGTGCGATCTTTCGAATAAGATCATTCCCAGGCTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

66

Amino Acids

7.39

Weight (kDa)

9.98

Isoelectric Point (pI)

53.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028992)

Species Orthologous Gene IDs
prunus_persica Prupe.1G065900_v2.0.a1 Prupe.6G036100_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 123
AccII CGCG 1 cut(s) 9
AjnI CCWGG 1 cut(s) 187
AluBI AGCT 1 cut(s) 38
AluI AGCT 1 cut(s) 38
Alw26I GTCTC 1 cut(s) 5
AseI ATTAAT 1 cut(s) 77
AspLEI GCGC 1 cut(s) 9
AsuII TTCGAA 1 cut(s) 172
BccI CCATC 1 cut(s) 23
BciT130I CCWGG 1 cut(s) 189
BcoDI GTCTC 1 cut(s) 5
BfaI CTAG 1 cut(s) 108
Bme1390I CCNGG 1 cut(s) 189
BmrFI CCNGG 1 cut(s) 189
BmsI GCATC 1 cut(s) 41
Bpu14I TTCGAA 1 cut(s) 172
BpuEI CTTGAG 1 cut(s) 7
BsaJI CCNNGG 1 cut(s) 187
BsaXI ACNNNNNCTCC 2 cut(s) 40, 70
BseBI CCWGG 1 cut(s) 189
BseDI CCNNGG 1 cut(s) 187
Bsh1236I CGCG 1 cut(s) 9
BsmAI GTCTC 1 cut(s) 5
Bsp119I TTCGAA 1 cut(s) 172
Bsp143I GATC 2 cut(s) 165, 179
BspFNI CGCG 1 cut(s) 9
BspQI GCTCTTC 1 cut(s) 28
BspT104I TTCGAA 1 cut(s) 172
BssECI CCNNGG 1 cut(s) 187
BssMI GATC 2 cut(s) 165, 179
Bst2UI CCWGG 1 cut(s) 189
Bst4CI ACNGT 1 cut(s) 128
Bst6I CTCTTC 2 cut(s) 28, 109
BstBI TTCGAA 1 cut(s) 172
BstFNI CGCG 1 cut(s) 9
BstHHI GCGC 1 cut(s) 9
BstKTI GATC 2 cut(s) 168, 182
BstMAI GTCTC 1 cut(s) 5
BstMBI GATC 2 cut(s) 165, 179
BstNI CCWGG 1 cut(s) 189
BstSCI CCNGG 1 cut(s) 187
BstUI CGCG 1 cut(s) 9
CfoI GCGC 1 cut(s) 9
CviJI RGCY 2 cut(s) 38, 192
CviKI_1 RGCY 2 cut(s) 38, 192
DpnI GATC 2 cut(s) 167, 181
DpnII GATC 2 cut(s) 165, 179
DraI TTTAAA 1 cut(s) 102
Eam1104I CTCTTC 2 cut(s) 28, 109
EarI CTCTTC 2 cut(s) 28, 109
EcoRII CCWGG 1 cut(s) 187
FblI GTMKAC 1 cut(s) 123
FspBI CTAG 1 cut(s) 108
GlaI GCGC 1 cut(s) 8
HhaI GCGC 1 cut(s) 9
Hin6I GCGC 1 cut(s) 7
HinP1I GCGC 1 cut(s) 7
HincII GTYRAC 1 cut(s) 124
HindII GTYRAC 1 cut(s) 124
Hpy166II GTNNAC 2 cut(s) 93, 124
Hpy188III TCNNGA 1 cut(s) 108
Hpy8I GTNNAC 2 cut(s) 93, 124
Hpy99I CGWCG 1 cut(s) 128
HpyCH4III ACNGT 1 cut(s) 128
HspAI GCGC 1 cut(s) 7
Kzo9I GATC 2 cut(s) 165, 179
LguI GCTCTTC 1 cut(s) 28
LpnPI CCDG 2 cut(s) 167, 174
LweI GCATC 1 cut(s) 41
MaeI CTAG 1 cut(s) 108
MalI GATC 2 cut(s) 167, 181
MboI GATC 2 cut(s) 165, 179
MboII GAAGA 3 cut(s) 45, 123, 126
MnlI CCTC 3 cut(s) 31, 64, 112
MseI TTAA 3 cut(s) 77, 101, 196
MspR9I CCNGG 1 cut(s) 189
MvaI CCWGG 1 cut(s) 189
MvnI CGCG 1 cut(s) 9
NdeII GATC 2 cut(s) 165, 179
NspV TTCGAA 1 cut(s) 172
PciSI GCTCTTC 1 cut(s) 28
PshBI ATTAAT 1 cut(s) 77
Psp6I CCWGG 1 cut(s) 187
PspGI CCWGG 1 cut(s) 187
SalI GTCGAC 1 cut(s) 122
SapI GCTCTTC 1 cut(s) 28
SaqAI TTAA 3 cut(s) 77, 101, 196
Sau3AI GATC 2 cut(s) 165, 179
ScrFI CCNGG 1 cut(s) 189
SetI ASST 3 cut(s) 23, 40, 123
SfaNI GCATC 1 cut(s) 41
SfuI TTCGAA 1 cut(s) 172
SgeI CNNG 6 cut(s) 20, 22, 36, 102, 120, 166
SmlI CTYRAG 1 cut(s) 22
SmoI CTYRAG 1 cut(s) 22
SspMI CTAG 1 cut(s) 108
StyD4I CCNGG 1 cut(s) 187
TaaI ACNGT 1 cut(s) 128
TaqI TCGA 2 cut(s) 123, 172
Tru1I TTAA 3 cut(s) 77, 101, 196
Tru9I TTAA 3 cut(s) 77, 101, 196
VspI ATTAAT 1 cut(s) 77
XbaI TCTAGA 1 cut(s) 107
XmiI GTMKAC 1 cut(s) 123
XspI CTAG 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.