Prupe.6G047100_v2.0.a1

Belongs to the peptidase S10 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Reverse (-)
3383630 .. 3386253
2624 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G047100.1

Sequence Viewer

Length: 420 bp
GAATTAGCCGTTTTGCCCTCCAGCTCTGTTCTCTTCTCTTCGTTAGAGTCGCTGAGGGATGGAAAACCTCTTCTCCTTCATCGCAACCCTCTCTCTCCTCTCTTCCTTTCTCTCCTCCGCTGCGAGCGTTTTGTTCGCTCTGAAATTTTGTTCATCGTTCTCATTGTTCTTTGTTTAGGTTCTTCGATGTCCATATGGAGGCTTCTACTTTTTTACGGAGCCATCTGCTTTTCCTTTTGCTTTTCAGATGCTGAGTTTGGTTGGCCTGATTGCGGGGCAATGATGGAAGAGGTCGGTCTACTGTTGGAGATTATTTGGAGGCTTCGACTTTATAGGAGTGGCGTGTGTTGGTCTTCTTCTTCAGATCGAACTCCAGCTTTCTCTCTGTTTCAGTCTCTTCCTCTCACTGATCTCTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

140

Amino Acids

15.73

Weight (kDa)

5.33

Isoelectric Point (pI)

54.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029020)

Species Orthologous Gene IDs
prunus_persica Prupe.6G047100_v2.0.a1 Prupe.6G047100_v2.0.a1

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 298
AciI CCGC 2 cut(s) 118, 273
AcsI RAATTY 1 cut(s) 144
AcuI CTGAAG 1 cut(s) 345
AfiI CCNNNNNNNGG 2 cut(s) 198, 272
AluBI AGCT 2 cut(s) 24, 377
AluI AGCT 2 cut(s) 24, 377
Alw26I GTCTC 1 cut(s) 399
AlwNI CAGNNNCTG 1 cut(s) 251
AoxI GGCC 1 cut(s) 263
ApeKI GCWGC 1 cut(s) 120
ApoI RAATTY 1 cut(s) 144
BbsI GAAGAC 1 cut(s) 345
BbvCI CCTCAGC 1 cut(s) 53
BbvI GCAGC 1 cut(s) 107
BccI CCATC 3 cut(s) 53, 230, 277
BcoDI GTCTC 1 cut(s) 399
BfaI CTAG 1 cut(s) 418
BisI GCNGC 1 cut(s) 121
BlsI GCNGC 1 cut(s) 122
BmiI GGNNCC 1 cut(s) 220
BmsI GCATC 1 cut(s) 238
BpiI GAAGAC 1 cut(s) 345
BpmI CTGGAG 2 cut(s) 4, 357
Bpu10I CCTNAGC 1 cut(s) 53
BsaXI ACNNNNNCTCC 2 cut(s) 57, 87
Bsc4I CCNNNNNNNGG 2 cut(s) 198, 272
Bse3DI GCAATG 1 cut(s) 285
BseGI GGATG 1 cut(s) 64
BseLI CCNNNNNNNGG 2 cut(s) 198, 272
BseMI GCAATG 1 cut(s) 285
BseMII CTCAG 2 cut(s) 44, 243
BseRI GAGGAG 2 cut(s) 87, 104
BseXI GCAGC 1 cut(s) 107
BshFI GGCC 1 cut(s) 265
BslI CCNNNNNNNGG 2 cut(s) 198, 272
BsmAI GTCTC 1 cut(s) 399
BsnI GGCC 1 cut(s) 265
Bsp143I GATC 2 cut(s) 364, 409
BspACI CCGC 2 cut(s) 118, 273
BspANI GGCC 1 cut(s) 265
BspCNI CTCAG 2 cut(s) 45, 244
BspLI GGNNCC 1 cut(s) 220
BsrDI GCAATG 1 cut(s) 285
BssMI GATC 2 cut(s) 364, 409
Bst4CI ACNGT 1 cut(s) 303
Bst6I CTCTTC 6 cut(s) 38, 43, 75, 107, 282, 402
BstC8I GCNNGC 1 cut(s) 125
BstDEI CTNAG 2 cut(s) 53, 252
BstF5I GGATG 1 cut(s) 64
BstKTI GATC 2 cut(s) 367, 412
BstMAI GTCTC 1 cut(s) 399
BstMBI GATC 2 cut(s) 364, 409
BstV1I GCAGC 1 cut(s) 107
BstV2I GAAGAC 1 cut(s) 345
BsuRI GGCC 1 cut(s) 265
BtgZI GCGATG 1 cut(s) 65
BtsCI GGATG 1 cut(s) 64
BtsIMutI CAGTG 1 cut(s) 405
Cac8I GCNNGC 1 cut(s) 125
CaiI CAGNNNCTG 1 cut(s) 251
CviJI RGCY 7 cut(s) 8, 24, 202, 221, 265, 322, 377
CviKI_1 RGCY 7 cut(s) 8, 24, 202, 221, 265, 322, 377
DdeI CTNAG 2 cut(s) 53, 252
DpnI GATC 2 cut(s) 366, 411
DpnII GATC 2 cut(s) 364, 409
Eam1104I CTCTTC 6 cut(s) 38, 43, 75, 107, 282, 402
EarI CTCTTC 6 cut(s) 38, 43, 75, 107, 282, 402
Eco57I CTGAAG 1 cut(s) 345
FaiI YATR 3 cut(s) 194, 196, 333
FauI CCCGC 1 cut(s) 266
FauNDI CATATG 1 cut(s) 194
FblI GTMKAC 1 cut(s) 298
Fnu4HI GCNGC 1 cut(s) 121
FokI GGATG 1 cut(s) 71
Fsp4HI GCNGC 1 cut(s) 121
FspBI CTAG 1 cut(s) 418
GluI GCNGC 1 cut(s) 121
GsuI CTGGAG 2 cut(s) 4, 357
HaeIII GGCC 1 cut(s) 265
HinfI GANTC 1 cut(s) 47
Hpy166II GTNNAC 1 cut(s) 299
Hpy188I TCNGA 3 cut(s) 142, 247, 364
Hpy8I GTNNAC 1 cut(s) 299
HpyAV CCTTC 1 cut(s) 86
HpyCH4III ACNGT 1 cut(s) 303
HpyF3I CTNAG 2 cut(s) 53, 252
Kzo9I GATC 2 cut(s) 364, 409
LmnI GCTCC 1 cut(s) 218
LpnPI CCDG 3 cut(s) 34, 279, 387
Lsp1109I GCAGC 1 cut(s) 107
LweI GCATC 1 cut(s) 238
MaeI CTAG 1 cut(s) 418
MalI GATC 2 cut(s) 366, 411
MboI GATC 2 cut(s) 364, 409
MluCI AATT 2 cut(s) 2, 144
MlyI GAGTC 1 cut(s) 56
MmeI TCCRAC 1 cut(s) 285
MspA1I CMGCKG 1 cut(s) 120
NdeI CATATG 1 cut(s) 194
NdeII GATC 2 cut(s) 364, 409
NlaIV GGNNCC 1 cut(s) 220
PkrI GCNGC 1 cut(s) 122
PleI GAGTC 1 cut(s) 55
PpsI GAGTC 1 cut(s) 55
PspN4I GGNNCC 1 cut(s) 220
PstNI CAGNNNCTG 1 cut(s) 251
SatI GCNGC 1 cut(s) 121
Sau3AI GATC 2 cut(s) 364, 409
SchI GAGTC 1 cut(s) 56
SetI ASST 5 cut(s) 26, 70, 181, 294, 379
SfaNI GCATC 1 cut(s) 238
SgeI CNNG 6 cut(s) 33, 136, 278, 286, 355, 386
Sse9I AATT 2 cut(s) 2, 144
SsiI CCGC 2 cut(s) 118, 273
SspMI CTAG 1 cut(s) 418
TaaI ACNGT 1 cut(s) 303
TaqI TCGA 3 cut(s) 185, 325, 367
TaqII GACCGA 1 cut(s) 284
TasI AATT 2 cut(s) 2, 144
TscAI CASTG 1 cut(s) 412
TseI GCWGC 1 cut(s) 120
TspDTI ATGAA 2 cut(s) 68, 142
TspGWI ACGGA 1 cut(s) 231
TspRI CASTG 1 cut(s) 412
XapI RAATTY 1 cut(s) 144
XmiI GTMKAC 1 cut(s) 298
XspI CTAG 1 cut(s) 418
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.