ribosomal large subunit assembly
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| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.6G064500_v2.0.a1 Prupe.7G132600_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 230 |
| AluBI | AGCT | 2 cut(s) | 195, 233 |
| AluI | AGCT | 2 cut(s) | 195, 233 |
| Alw21I | GWGCWC | 1 cut(s) | 214 |
| Alw44I | GTGCAC | 1 cut(s) | 210 |
| Ama87I | CYCGRG | 1 cut(s) | 42 |
| AoxI | GGCC | 1 cut(s) | 74 |
| ApaLI | GTGCAC | 1 cut(s) | 210 |
| ApeKI | GCWGC | 1 cut(s) | 35 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 88 |
| AvaI | CYCGRG | 1 cut(s) | 42 |
| BaeGI | GKGCMC | 1 cut(s) | 214 |
| Bbv12I | GWGCWC | 1 cut(s) | 214 |
| BbvCI | CCTCAGC | 1 cut(s) | 30 |
| BbvI | GCAGC | 1 cut(s) | 22 |
| BfmI | CTRYAG | 1 cut(s) | 196 |
| BisI | GCNGC | 1 cut(s) | 36 |
| BlsI | GCNGC | 1 cut(s) | 37 |
| BmeT110I | CYCGRG | 1 cut(s) | 42 |
| BpmI | CTGGAG | 1 cut(s) | 51 |
| Bpu10I | CCTNAGC | 1 cut(s) | 30 |
| BsaWI | WCCGGW | 1 cut(s) | 92 |
| Bse1I | ACTGG | 1 cut(s) | 242 |
| BseGI | GGATG | 1 cut(s) | 118 |
| BseMII | CTCAG | 1 cut(s) | 21 |
| BseNI | ACTGG | 1 cut(s) | 242 |
| BseRI | GAGGAG | 2 cut(s) | 68, 71 |
| BseSI | GKGCMC | 1 cut(s) | 214 |
| BseXI | GCAGC | 1 cut(s) | 22 |
| BshFI | GGCC | 1 cut(s) | 76 |
| BsiHKAI | GWGCWC | 1 cut(s) | 214 |
| BsiHKCI | CYCGRG | 1 cut(s) | 42 |
| BsiSI | CCGG | 1 cut(s) | 93 |
| BsmI | GAATGC | 1 cut(s) | 209 |
| BsnI | GGCC | 1 cut(s) | 76 |
| BsoBI | CYCGRG | 1 cut(s) | 42 |
| Bsp1286I | GDGCHC | 1 cut(s) | 214 |
| BspANI | GGCC | 1 cut(s) | 76 |
| BspCNI | CTCAG | 1 cut(s) | 22 |
| BsrI | ACTGG | 1 cut(s) | 242 |
| Bst4CI | ACNGT | 1 cut(s) | 200 |
| Bst6I | CTCTTC | 1 cut(s) | 5 |
| BstDEI | CTNAG | 1 cut(s) | 30 |
| BstF5I | GGATG | 1 cut(s) | 118 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 35 |
| BstSFI | CTRYAG | 1 cut(s) | 196 |
| BstSLI | GKGCMC | 1 cut(s) | 214 |
| BstV1I | GCAGC | 1 cut(s) | 22 |
| BsuRI | GGCC | 1 cut(s) | 76 |
| BtsCI | GGATG | 1 cut(s) | 118 |
| BtsIMutI | CAGTG | 1 cut(s) | 205 |
| CviJI | RGCY | 5 cut(s) | 29, 35, 76, 195, 233 |
| CviKI_1 | RGCY | 5 cut(s) | 29, 35, 76, 195, 233 |
| DdeI | CTNAG | 1 cut(s) | 30 |
| Eam1104I | CTCTTC | 1 cut(s) | 5 |
| EarI | CTCTTC | 1 cut(s) | 5 |
| Eco147I | AGGCCT | 1 cut(s) | 76 |
| Eco88I | CYCGRG | 1 cut(s) | 42 |
| Fnu4HI | GCNGC | 1 cut(s) | 36 |
| FokI | GGATG | 1 cut(s) | 125 |
| Fsp4HI | GCNGC | 1 cut(s) | 36 |
| GluI | GCNGC | 1 cut(s) | 36 |
| GsuI | CTGGAG | 1 cut(s) | 51 |
| HaeIII | GGCC | 1 cut(s) | 76 |
| HapII | CCGG | 1 cut(s) | 93 |
| HindIII | AAGCTT | 1 cut(s) | 231 |
| HinfI | GANTC | 3 cut(s) | 40, 134, 256 |
| HpaII | CCGG | 1 cut(s) | 93 |
| Hpy166II | GTNNAC | 2 cut(s) | 124, 212 |
| Hpy188I | TCNGA | 2 cut(s) | 189, 272 |
| Hpy188III | TCNNGA | 3 cut(s) | 44, 68, 260 |
| Hpy8I | GTNNAC | 2 cut(s) | 124, 212 |
| Hpy99I | CGWCG | 1 cut(s) | 189 |
| HpyAV | CCTTC | 2 cut(s) | 94, 157 |
| HpyCH4III | ACNGT | 1 cut(s) | 200 |
| HpyCH4V | TGCA | 1 cut(s) | 212 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 35 |
| HpyF3I | CTNAG | 1 cut(s) | 30 |
| LmnI | GCTCC | 1 cut(s) | 70 |
| LpnPI | CCDG | 3 cut(s) | 81, 106, 223 |
| Lsp1109I | GCAGC | 1 cut(s) | 22 |
| MaeIII | GTNAC | 1 cut(s) | 172 |
| MboII | GAAGA | 2 cut(s) | 19, 22 |
| MhlI | GDGCHC | 1 cut(s) | 214 |
| MluCI | AATT | 1 cut(s) | 225 |
| MlyI | GAGTC | 2 cut(s) | 34, 265 |
| MmeI | TCCRAC | 2 cut(s) | 77, 167 |
| MnlI | CCTC | 6 cut(s) | 19, 25, 46, 49, 52, 66 |
| MroXI | GAANNNNTTC | 1 cut(s) | 88 |
| MspI | CCGG | 1 cut(s) | 93 |
| Mva1269I | GAATGC | 1 cut(s) | 209 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 35 |
| PaeR7I | CTCGAG | 1 cut(s) | 42 |
| PceI | AGGCCT | 1 cut(s) | 76 |
| PctI | GAATGC | 1 cut(s) | 209 |
| PdmI | GAANNNNTTC | 1 cut(s) | 88 |
| PfeI | GAWTC | 1 cut(s) | 134 |
| PkrI | GCNGC | 1 cut(s) | 37 |
| PleI | GAGTC | 2 cut(s) | 34, 264 |
| PpsI | GAGTC | 2 cut(s) | 34, 264 |
| SatI | GCNGC | 1 cut(s) | 36 |
| SchI | GAGTC | 2 cut(s) | 34, 265 |
| SduI | GDGCHC | 1 cut(s) | 214 |
| SetI | ASST | 5 cut(s) | 63, 168, 197, 235, 267 |
| SfcI | CTRYAG | 1 cut(s) | 196 |
| Sfr274I | CTCGAG | 1 cut(s) | 42 |
| SgeI | CNNG | 9 cut(s) | 37, 54, 56, 80, 105, 131, 189, 195, 250 |
| SlaI | CTCGAG | 1 cut(s) | 42 |
| SmlI | CTYRAG | 1 cut(s) | 42 |
| SmoI | CTYRAG | 1 cut(s) | 42 |
| Sse9I | AATT | 1 cut(s) | 225 |
| SseBI | AGGCCT | 1 cut(s) | 76 |
| StuI | AGGCCT | 1 cut(s) | 76 |
| TaaI | ACNGT | 1 cut(s) | 200 |
| TaqI | TCGA | 1 cut(s) | 43 |
| TasI | AATT | 1 cut(s) | 225 |
| TfiI | GAWTC | 1 cut(s) | 134 |
| TscAI | CASTG | 1 cut(s) | 205 |
| TseI | GCWGC | 1 cut(s) | 35 |
| TspRI | CASTG | 1 cut(s) | 205 |
| VneI | GTGCAC | 1 cut(s) | 210 |
| XhoI | CTCGAG | 1 cut(s) | 42 |
| XmnI | GAANNNNTTC | 1 cut(s) | 88 |