Prupe.6G064700_v2.0.a1

Ring finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0021230
Physical Location & Seq
Forward (+)
4478651 .. 4485294
6644 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G064700.2

Sequence Viewer

Length: 2115 bp
ATGCACATGGCAGGGAGCTCTGGATGTGCCTTTGGCAATTCTCCTGTAGTATGCAACAGGTGTGGAATCCAAATTGTGCTTCGTCAGGCGCAGGAGCATGCACAAAATTGCCCTGGTGTGCACCCTCAAGCGCAGCAGGCTGATGGTGCTTTGGACACTTCAGCTTCTGGCACATCAGCCACTGCTGATCAGACCCAGGCTGCCACTCAGTCAGGAGTAGCGATGTCTCAGGTCCAGATTTTTCAAATTACAATTGTCACTCCACCTGGATCCGATCCAGATCAGGAAGCAAACTCTAGTTCTCAAGCTGTTGTTCAAGCTGCTGTGCAAACTGCTGAACAGTGGTACCAACATCAGCAACAATATCAACAGTACTACCAGGCAGCAGTTCAACAATCACAGCAGCGGCATTTGCAATCTCATCCACCATACGGGACAGTCCAGCATCAACCTCGGGCATACTTGCAATCTCGGCCCCAAACTCAACCTTCACTACGGGCCCAACTATCTCAATCTCAAGCTCAACCCAAACCCCAAATTCAGCCCCCACATGTGCAGGTTCCTGTTGCCTCTCAAACTCAAAATCAGGCACAAGTGAACAAACAGCAGCAACTTCGCCCTGCAGTGCAGACTTATCCAGCTGCTCGTAGGCAGCCACTCCCTCAACCTCAATATTTCCAAGCTCCATCCCATTCACAACCACATCCTCAGCATGTGCAAATGCCTCATAATCAGCAGGCCCAAATTCAGCAACATACTCACTCCAAGATTCACCCGCAACACCATCCCATTTCTCTACCCCAACCTCATTCACAACCTCAGCCACATCCACAGCTTCAACGGCTTCCCCAGCCCCATCCCCAACTTCACCCTTCTCAGCCCATGAATACTACCGTCCAGCCTCAGACACAACATCCATCATCTCATGCAGTGACTGGTAATCACTTGTACCCTCAACCCCACCTTCACCAACCAGTGCAGTCAGGCGCCCCACAACAACGTACTATGGACATGCAATCTCATGGTGTACCTCACTCTCAGTCACAAACTCCTGTTCAAATACAGAGTCAGCCCCCTCAACAACCCCCAGTCATGCGGCTGCCCCCATCTCATATTCCAAACCAGCAGCAGCCAGCTTTGTTGCCTTCTCCTGGTCAAATCCGAAACATTAATCCTGCACAACAGCAGCCGGTTCACTCTTATGCTCAGCAACCTGGGAATACTGTTCAACAGCGCCCTCTTATGCATGCAGTTCAACGATCGATTCCTCGTCAATATCTCCACCATCAGCCCTATGTACAACAGCAACCACCTACACAGTTACATCCCCGGGGTCAATCTCATTCATTCCCTCTACATGTTCATGCCTATACACAGTCTCAGCGGAACATTGCATTGTCTCAGGGCATTCAACTTAGCCAGTCTAATCTTGGCGGAAGCAGAAGGCCTATGATGCCAATTCATGGAGTACAATCTCAGACCTCTGTACAAACTGCTGGAGGTCTTCACATGAGGCCAGTGCATCCTACTGTAAATCTTCCATCTACAAATCACAGCAATATGGTCAGAACAAAAAACCTAGTGCAATCTGGAGCGAGCTGGAGACCAACCACGTCTGAGAGGCATGCTGAGGAAGAATCTGAGTCATCAGCTCAGCAAATTGCTAAAAATGTTACACATGATGTGGGTACAGCATCTGCTGTGGTAGGTGATGCCGAAGTTAAAACTGTGAAATCTGATATGGATATGAAGTCCATTGATAATGAGAATAAACCTACTGGTGAAGATAAAACTAATCATGGTGATACATCTTCCAAGGAGATTCCAGATATACATGCACTTGAAAATGGAGAGTCTGTAAGTCAATCAATGTTGAATGCAGCGGATCAAAATAAGGTACGAAAGTCGGGGGTGGCGAGAGGGAGGCATTATAGAGGGGTGAGACAGAGGCGGTTTGGGAAGTTCACGGCTGAGATTCGGGACCCAGCTAAGAAGGTATCCAGAAAGAGAGTGTCGCTTGGGTGCTATGAGACCTCTGAGGAAGCGGCTTTGGCTTATGACAGTGCCGCCCAACGCATACATGGCTCCAAGGCTTTGCTCAATTTCCCAATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000228 GO:0000793 GO:0000794 GO:0001701 GO:0001756 GO:0001932 GO:0002020 GO:0002791 GO:0002793 GO:0003002 GO:0003007 GO:0003008 GO:0003012 GO:0003013 GO:0003015 GO:0003300 GO:0003674 GO:0003779 GO:0003824 GO:0004672 GO:0004674 GO:0004713 GO:0005198 GO:0005200 GO:0005488 GO:0005509 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0005737 GO:0005856 GO:0005859 GO:0005865 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006936 GO:0006941 GO:0006996 GO:0007010 GO:0007015 GO:0007154 GO:0007165 GO:0007275 GO:0007389 GO:0007399 GO:0007417 GO:0007420 GO:0007507 GO:0007512 GO:0007517 GO:0008015 GO:0008092 GO:0008150 GO:0008152 GO:0008307 GO:0009581 GO:0009582 GO:0009605 GO:0009612 GO:0009628 GO:0009653 GO:0009790 GO:0009792 GO:0009887 GO:0009888 GO:0009893 GO:0009952 GO:0009987 GO:0010035 GO:0010038 GO:0010468 GO:0010604 GO:0010628 GO:0010737 GO:0010927 GO:0014706 GO:0014866 GO:0014896 GO:0014897 GO:0015629 GO:0016043 GO:0016301 GO:0016310 GO:0016459 GO:0016460 GO:0016740 GO:0016772 GO:0016773 GO:0018108 GO:0018193 GO:0018212 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019900 GO:0019901 GO:0021591 GO:0022607 GO:0023052 GO:0030016 GO:0030017 GO:0030018 GO:0030029 GO:0030036 GO:0030154 GO:0030239 GO:0030240 GO:0030241 GO:0030506 GO:0031032 GO:0031033 GO:0031034 GO:0031323 GO:0031399 GO:0031430 GO:0031433 GO:0031672 GO:0031674 GO:0031974 GO:0031981 GO:0032268 GO:0032501 GO:0032502 GO:0032879 GO:0032880 GO:0032989 GO:0032991 GO:0033058 GO:0034622 GO:0035051 GO:0035265 GO:0035282 GO:0035556 GO:0035994 GO:0035995 GO:0036211 GO:0036379 GO:0040007 GO:0040011 GO:0042221 GO:0042325 GO:0042692 GO:0042802 GO:0042805 GO:0043009 GO:0043056 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043292 GO:0043412 GO:0043549 GO:0043621 GO:0043933 GO:0044057 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044449 GO:0044464 GO:0044877 GO:0045214 GO:0045859 GO:0046872 GO:0048468 GO:0048513 GO:0048518 GO:0048522 GO:0048589 GO:0048644 GO:0048646 GO:0048729 GO:0048731 GO:0048738 GO:0048739 GO:0048747 GO:0048769 GO:0048856 GO:0048869 GO:0050708 GO:0050714 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0050982 GO:0051015 GO:0051046 GO:0051047 GO:0051049 GO:0051050 GO:0051146 GO:0051171 GO:0051174 GO:0051222 GO:0051223 GO:0051239 GO:0051246 GO:0051338 GO:0051371 GO:0051393 GO:0051592 GO:0051606 GO:0051716 GO:0055001 GO:0055002 GO:0055003 GO:0055006 GO:0055007 GO:0055008 GO:0055013 GO:0060047 GO:0060048 GO:0060255 GO:0060322 GO:0060415 GO:0060419 GO:0060429 GO:0060537 GO:0061053 GO:0061061 GO:0065003 GO:0065007 GO:0065009 GO:0070013 GO:0070201 GO:0070925 GO:0071688 GO:0071704 GO:0071840 GO:0072359 GO:0080090 GO:0090087 GO:0090257 GO:0097435 GO:0097493 GO:0099080 GO:0099081 GO:0099512 GO:0140096 GO:1901077 GO:1901564 GO:1901897 GO:1903530 GO:1903532 GO:1904951
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

705

Amino Acids

77.76

Weight (kDa)

9.77

Isoelectric Point (pI)

68.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 547
Acc65I GGTACC 1 cut(s) 345
AccB1I GGYRCC 2 cut(s) 345, 986
AccB7I CCANNNNNTGG 1 cut(s) 1463
AciI CCGC 9 cut(s) 406, 776, 1096, 1384, 1434, 1883, 1951, 2045, 2067
AclWI GGATC 4 cut(s) 264, 269, 277, 1893
AcsI RAATTY 2 cut(s) 537, 744
AcuI CTGAAG 1 cut(s) 144
AcyI GRCGYC 1 cut(s) 987
AfiI CCNNNNNNNGG 3 cut(s) 431, 1151, 1463
AflIII ACRYGT 2 cut(s) 550, 1357
AjiI CACGTC 1 cut(s) 1614
AjnI CCWGG 6 cut(s) 112, 195, 265, 378, 1150, 1213
AjuI GAANNNNNNNTTGG 2 cut(s) 63, 95
Alw21I GWGCWC 2 cut(s) 20, 123
Alw26I GTCTC 6 cut(s) 231, 1383, 1404, 1597, 1936, 2024
Alw44I GTGCAC 1 cut(s) 119
AlwI GGATC 4 cut(s) 264, 269, 277, 1893
AlwNI CAGNNNCTG 4 cut(s) 167, 182, 935, 1697
Ama87I CYCGRG 2 cut(s) 453, 1329
AoxI GGCC 5 cut(s) 473, 498, 738, 1445, 1514
ApaI GGGCCC 1 cut(s) 502
ApaLI GTGCAC 1 cut(s) 119
ApoI RAATTY 2 cut(s) 537, 744
ArsI GACNNNNNNTTYG 2 cut(s) 1051, 1083
AseI ATTAAT 1 cut(s) 1170
Asp718I GGTACC 1 cut(s) 345
AspLEI GCGC 4 cut(s) 91, 133, 989, 1236
AspS9I GGNCC 6 cut(s) 232, 474, 498, 499, 739, 1981
AsuC2I CCSGG 2 cut(s) 1330, 1331
AsuHPI GGTGA 7 cut(s) 764, 860, 959, 1721, 1793, 1814, 1951
AvaI CYCGRG 2 cut(s) 453, 1329
AvaII GGWCC 2 cut(s) 232, 1981
BaeGI GKGCMC 2 cut(s) 123, 502
BaeI ACNNNNGTAYC 4 cut(s) 329, 362, 1889, 1922
BamHI GGATCC 1 cut(s) 269
BanI GGYRCC 2 cut(s) 345, 986
BanII GRGCYC 2 cut(s) 20, 502
BbsI GAAGAC 1 cut(s) 1496
Bbv12I GWGCWC 2 cut(s) 20, 123
BbvCI CCTCAGC 3 cut(s) 708, 819, 1629
BccI CCATC 8 cut(s) 137, 694, 792, 864, 925, 1114, 1293, 1549
BceAI ACGGC 2 cut(s) 857, 1983
BcgI CGANNNNNNTGC 4 cut(s) 434, 468, 596, 630
BciT130I CCWGG 6 cut(s) 114, 197, 267, 380, 1152, 1215
BciVI GTATCC 1 cut(s) 2008
BclI TGATCA 1 cut(s) 187
BcnI CCSGG 2 cut(s) 1330, 1331
BcoDI GTCTC 6 cut(s) 231, 1383, 1404, 1597, 1936, 2024
BfaI CTAG 2 cut(s) 297, 1580
BfmI CTRYAG 2 cut(s) 45, 621
BfoI RGCGCY 2 cut(s) 990, 1237
BfuAI ACCTGC 1 cut(s) 547
BfuI GTATCC 1 cut(s) 2008
BlpI GCTNAGC 2 cut(s) 1206, 1653
BmcAI AGTACT 1 cut(s) 374
Bme1390I CCNGG 8 cut(s) 114, 197, 267, 380, 1152, 1215, 1330, 1331
Bme18I GGWCC 2 cut(s) 232, 1981
BmeT110I CYCGRG 2 cut(s) 453, 1329
BmgBI CACGTC 1 cut(s) 1614
BmgT120I GGNCC 6 cut(s) 232, 474, 498, 499, 739, 1981
BmiI GGNNCC 9 cut(s) 271, 347, 476, 500, 561, 988, 1982, 1983, 2086
BmrFI CCNGG 8 cut(s) 114, 197, 267, 380, 1152, 1215, 1330, 1331
BmrI ACTGGG 1 cut(s) 1082
BmsI GCATC 5 cut(s) 454, 1443, 1531, 1702, 1703
BmuI ACTGGG 1 cut(s) 1082
BpiI GAAGAC 1 cut(s) 1496
BpmI CTGGAG 3 cut(s) 1518, 1611, 1621
Bpu10I CCTNAGC 3 cut(s) 708, 819, 1629
Bpu1102I GCTNAGC 2 cut(s) 1206, 1653
BpuEI CTTGAG 3 cut(s) 111, 288, 501
BpuMI CCSGG 2 cut(s) 1330, 1331
Bsa29I ATCGAT 1 cut(s) 1262
BsaBI GATNNNNATC 1 cut(s) 279
BsaHI GRCGYC 1 cut(s) 987
BsaI GGTCTC 2 cut(s) 1597, 2024
BsaJI CCNNGG 9 cut(s) 112, 195, 452, 1214, 1328, 1329, 1330, 1815, 2088
BsaXI ACNNNNNCTCC 2 cut(s) 1842, 1872
Bsc4I CCNNNNNNNGG 3 cut(s) 431, 1151, 1463
Bse118I RCCGGY 1 cut(s) 1189
Bse1I ACTGG 6 cut(s) 940, 974, 1088, 1420, 1517, 1783
Bse3DI GCAATG 1 cut(s) 1389
Bse8I GATNNNNATC 1 cut(s) 279
BseBI CCWGG 6 cut(s) 114, 197, 267, 380, 1152, 1215
BseCI ATCGAT 1 cut(s) 1262
BseDI CCNNGG 9 cut(s) 112, 195, 452, 1214, 1328, 1329, 1330, 1815, 2088
BseJI GATNNNNATC 1 cut(s) 279
BseLI CCNNNNNNNGG 3 cut(s) 431, 1151, 1463
BseMI GCAATG 1 cut(s) 1389
BseNI ACTGG 6 cut(s) 940, 974, 1088, 1420, 1517, 1783
BseSI GKGCMC 2 cut(s) 123, 502
BseYI CCCAGC 2 cut(s) 849, 1984
BsgI GTGCAG 4 cut(s) 575, 647, 998, 1161
Bsh1285I CGRYCG 1 cut(s) 1262
BshFI GGCC 5 cut(s) 475, 500, 740, 1447, 1516
BshNI GGYRCC 2 cut(s) 345, 986
BshVI ATCGAT 1 cut(s) 1262
BsiEI CGRYCG 1 cut(s) 1262
BsiHKAI GWGCWC 2 cut(s) 20, 123
BsiHKCI CYCGRG 2 cut(s) 453, 1329
BsiSI CCGG 2 cut(s) 1190, 1330
BslFI GGGAC 2 cut(s) 448, 1994
BslI CCNNNNNNNGG 3 cut(s) 431, 1151, 1463
BsmAI GTCTC 6 cut(s) 231, 1383, 1404, 1597, 1936, 2024
BsmFI GGGAC 2 cut(s) 448, 1994
BsmI GAATGC 2 cut(s) 1407, 1882
BsnI GGCC 5 cut(s) 475, 500, 740, 1447, 1516
Bso31I GGTCTC 2 cut(s) 1597, 2024
BsoBI CYCGRG 2 cut(s) 453, 1329
Bsp120I GGGCCC 1 cut(s) 498
Bsp1286I GDGCHC 3 cut(s) 20, 123, 502
Bsp1407I TGTACA 2 cut(s) 1297, 1486
Bsp143I GATC 6 cut(s) 187, 269, 274, 280, 1259, 1885
Bsp1720I GCTNAGC 2 cut(s) 1206, 1653
BspACI CCGC 9 cut(s) 406, 776, 1096, 1384, 1434, 1883, 1951, 2045, 2067
BspANI GGCC 5 cut(s) 475, 500, 740, 1447, 1516
BspDI ATCGAT 1 cut(s) 1262
BspLI GGNNCC 9 cut(s) 271, 347, 476, 500, 561, 988, 1982, 1983, 2086
BspMAI CTGCAG 1 cut(s) 625
BspMI ACCTGC 1 cut(s) 547
BspPI GGATC 4 cut(s) 264, 269, 277, 1893
BspT107I GGYRCC 2 cut(s) 345, 986
BspTNI GGTCTC 2 cut(s) 1597, 2024
BsrDI GCAATG 1 cut(s) 1389
BsrFI RCCGGY 1 cut(s) 1189
BsrGI TGTACA 2 cut(s) 1297, 1486
BsrI ACTGG 6 cut(s) 940, 974, 1088, 1420, 1517, 1783
BssAI RCCGGY 1 cut(s) 1189
BssECI CCNNGG 9 cut(s) 112, 195, 452, 1214, 1328, 1329, 1330, 1815, 2088
BssMI GATC 6 cut(s) 187, 269, 274, 280, 1259, 1885
BssNI GRCGYC 1 cut(s) 987
BssT1I CCWWGG 2 cut(s) 1815, 2088
Bst2UI CCWGG 6 cut(s) 114, 197, 267, 380, 1152, 1215
BstACI GRCGYC 1 cut(s) 987
BstAUI TGTACA 2 cut(s) 1297, 1486
BstC8I GCNNGC 7 cut(s) 99, 138, 738, 1134, 1248, 1597, 1626
BstH2I RGCGCY 2 cut(s) 990, 1237
BstHHI GCGC 4 cut(s) 91, 133, 989, 1236
BstKTI GATC 6 cut(s) 190, 272, 277, 283, 1262, 1888
BstMAI GTCTC 6 cut(s) 231, 1383, 1404, 1597, 1936, 2024
BstMBI GATC 6 cut(s) 187, 269, 274, 280, 1259, 1885
BstMCI CGRYCG 1 cut(s) 1262
BstMWI GCNNNNNNNGC 9 cut(s) 137, 146, 412, 472, 841, 850, 1453, 2051, 2082
BstNI CCWGG 6 cut(s) 114, 197, 267, 380, 1152, 1215
BstNSI RCATGY 8 cut(s) 101, 554, 716, 1015, 1250, 1361, 1628, 1838
BstSCI CCNGG 8 cut(s) 112, 195, 265, 378, 1150, 1213, 1328, 1329
BstSFI CTRYAG 2 cut(s) 45, 621
BstSLI GKGCMC 2 cut(s) 123, 502
BstV2I GAAGAC 1 cut(s) 1496
BstX2I RGATCY 1 cut(s) 269
BstYI RGATCY 1 cut(s) 269
Bsu15I ATCGAT 1 cut(s) 1262
BsuI GTATCC 1 cut(s) 2008
BsuRI GGCC 5 cut(s) 475, 500, 740, 1447, 1516
BsuTUI ATCGAT 1 cut(s) 1262
BtgZI GCGATG 1 cut(s) 236
BtrI CACGTC 1 cut(s) 1614
BtsI GCAGTG 3 cut(s) 180, 630, 936
BtsIMutI CAGTG 7 cut(s) 180, 347, 630, 936, 981, 1524, 2068
BveI ACCTGC 1 cut(s) 547
Cac8I GCNNGC 7 cut(s) 99, 138, 738, 1134, 1248, 1597, 1626
CaiI CAGNNNCTG 4 cut(s) 167, 182, 935, 1697
CfoI GCGC 4 cut(s) 91, 133, 989, 1236
Cfr10I RCCGGY 1 cut(s) 1189
Cfr13I GGNCC 6 cut(s) 232, 474, 498, 499, 739, 1981
Cfr9I CCCGGG 1 cut(s) 1329
ClaI ATCGAT 1 cut(s) 1262
CspCI CAANNNNNGTGG 2 cut(s) 43, 78
DinI GGCGCC 1 cut(s) 988
DpnI GATC 6 cut(s) 189, 271, 276, 282, 1261, 1887
DpnII GATC 6 cut(s) 187, 269, 274, 280, 1259, 1885
EciI GGCGGA 1 cut(s) 1449
Ecl136II GAGCTC 1 cut(s) 18
Eco130I CCWWGG 2 cut(s) 1815, 2088
Eco147I AGGCCT 1 cut(s) 1447
Eco24I GRGCYC 2 cut(s) 20, 502
Eco31I GGTCTC 2 cut(s) 1597, 2024
Eco47I GGWCC 2 cut(s) 232, 1981
Eco53kI GAGCTC 1 cut(s) 18
Eco57I CTGAAG 1 cut(s) 144
Eco88I CYCGRG 2 cut(s) 453, 1329
EcoICRI GAGCTC 1 cut(s) 18
EcoO109I RGGNCCY 1 cut(s) 1981
EcoRII CCWGG 6 cut(s) 112, 195, 265, 378, 1150, 1213
EcoT14I CCWWGG 2 cut(s) 1815, 2088
EcoT22I ATGCAT 1 cut(s) 1248
EcoT38I GRGCYC 2 cut(s) 20, 502
EgeI GGCGCC 1 cut(s) 988
EheI GGCGCC 1 cut(s) 988
ErhI CCWWGG 2 cut(s) 1815, 2088
FaqI GGGAC 2 cut(s) 448, 1994
FauI CCCGC 1 cut(s) 783
FbaI TGATCA 1 cut(s) 187
FriOI GRGCYC 2 cut(s) 20, 502
FspBI CTAG 2 cut(s) 297, 1580
GlaI GCGC 4 cut(s) 90, 132, 988, 1235
GsaI CCCAGC 2 cut(s) 853, 1988
GsuI CTGGAG 3 cut(s) 1518, 1611, 1621
HaeII RGCGCY 2 cut(s) 990, 1237
HaeIII GGCC 5 cut(s) 475, 500, 740, 1447, 1516
HapII CCGG 2 cut(s) 1190, 1330
HhaI GCGC 4 cut(s) 91, 133, 989, 1236
Hin1I GRCGYC 1 cut(s) 987
Hin6I GCGC 4 cut(s) 89, 131, 987, 1234
HinP1I GCGC 4 cut(s) 89, 131, 987, 1234
HinfI GANTC 9 cut(s) 66, 769, 1066, 1264, 1637, 1643, 1822, 1853, 1975
HpaII CCGG 2 cut(s) 1190, 1330
HphI GGTGA 7 cut(s) 764, 860, 959, 1721, 1793, 1814, 1951
Hpy166II GTNNAC 5 cut(s) 121, 598, 1028, 1195, 1965
Hpy188III TCNNGA 9 cut(s) 21, 213, 235, 278, 284, 1590, 1826, 1979, 2001
Hpy8I GTNNAC 5 cut(s) 121, 598, 1028, 1195, 1965
HpyAV CCTTC 6 cut(s) 498, 882, 974, 1155, 1437, 1987
HpyCH4IV ACGT 2 cut(s) 1000, 1613
HpyF10VI GCNNNNNNNGC 9 cut(s) 137, 146, 412, 472, 841, 850, 1453, 2051, 2082
HpySE526I ACGT 2 cut(s) 1000, 1613
Hsp92I GRCGYC 1 cut(s) 987
HspAI GCGC 4 cut(s) 89, 131, 987, 1234
KasI GGCGCC 1 cut(s) 986
KflI GGGWCCC 1 cut(s) 1981
KpnI GGTACC 1 cut(s) 349
Ksp22I TGATCA 1 cut(s) 187
Kzo9I GATC 6 cut(s) 187, 269, 274, 280, 1259, 1885
LmnI GCTCC 5 cut(s) 15, 94, 688, 1592, 2090
LweI GCATC 5 cut(s) 454, 1443, 1531, 1702, 1703
MaeI CTAG 2 cut(s) 297, 1580
MaeII ACGT 2 cut(s) 1000, 1613
MaeIII GTNAC 5 cut(s) 256, 931, 1041, 1320, 1672
MalI GATC 6 cut(s) 189, 271, 276, 282, 1261, 1887
MboI GATC 6 cut(s) 187, 269, 274, 280, 1259, 1885
MboII GAAGA 5 cut(s) 1496, 1529, 1646, 1796, 1803
MfeI CAATTG 1 cut(s) 252
MflI RGATCY 1 cut(s) 269
MhlI GDGCHC 3 cut(s) 20, 123, 502
Mly113I GGCGCC 1 cut(s) 987
MlyI GAGTC 3 cut(s) 1075, 1652, 1862
Mph1103I ATGCAT 1 cut(s) 1248
MseI TTAA 2 cut(s) 1170, 1722
MslI CAYNNNNRTG 2 cut(s) 1200, 1362
MspA1I CMGCKG 4 cut(s) 406, 641, 1384, 1883
MspI CCGG 2 cut(s) 1190, 1330
MspR9I CCNGG 8 cut(s) 114, 197, 267, 380, 1152, 1215, 1330, 1331
MunI CAATTG 1 cut(s) 252
Mva1269I GAATGC 2 cut(s) 1407, 1882
MvaI CCWGG 6 cut(s) 114, 197, 267, 380, 1152, 1215
MwoI GCNNNNNNNGC 9 cut(s) 137, 146, 412, 472, 841, 850, 1453, 2051, 2082
NarI GGCGCC 1 cut(s) 987
NciI CCSGG 2 cut(s) 1330, 1331
NdeII GATC 6 cut(s) 187, 269, 274, 280, 1259, 1885
NlaIV GGNNCC 9 cut(s) 271, 347, 476, 500, 561, 988, 1982, 1983, 2086
NmeAIII GCCGAG 1 cut(s) 451
NmuCI GTSAC 3 cut(s) 256, 931, 1041
NsiI ATGCAT 1 cut(s) 1248
NspI RCATGY 8 cut(s) 101, 554, 716, 1015, 1250, 1361, 1628, 1838
PaeI GCATGC 3 cut(s) 101, 1250, 1628
PceI AGGCCT 1 cut(s) 1447
PciI ACATGT 2 cut(s) 550, 1357
PcsI WCGNNNNNNNCGW 1 cut(s) 1913
PctI GAATGC 2 cut(s) 1407, 1882
PfeI GAWTC 6 cut(s) 66, 769, 1264, 1637, 1822, 1975
PflMI CCANNNNNTGG 1 cut(s) 1463
Ple19I CGATCG 1 cut(s) 1262
PleI GAGTC 3 cut(s) 1074, 1651, 1861
PluTI GGCGCC 1 cut(s) 990
PpsI GAGTC 3 cut(s) 1074, 1651, 1861
PpuMI RGGWCCY 1 cut(s) 1981
PscI ACATGT 2 cut(s) 550, 1357
PshBI ATTAAT 1 cut(s) 1170
Psp124BI GAGCTC 1 cut(s) 20
Psp5II RGGWCCY 1 cut(s) 1981
Psp6I CCWGG 6 cut(s) 112, 195, 265, 378, 1150, 1213
PspFI CCCAGC 2 cut(s) 849, 1984
PspGI CCWGG 6 cut(s) 112, 195, 265, 378, 1150, 1213
PspN4I GGNNCC 9 cut(s) 271, 347, 476, 500, 561, 988, 1982, 1983, 2086
PspOMI GGGCCC 1 cut(s) 498
PspPI GGNCC 6 cut(s) 232, 474, 498, 499, 739, 1981
PspPPI RGGWCCY 1 cut(s) 1981
PstI CTGCAG 1 cut(s) 625
PstNI CAGNNNCTG 4 cut(s) 167, 182, 935, 1697
PsuI RGATCY 1 cut(s) 269
PvuI CGATCG 1 cut(s) 1262
PvuII CAGCTG 1 cut(s) 641
RseI CAYNNNNRTG 2 cut(s) 1200, 1362
SacI GAGCTC 1 cut(s) 20
SaqAI TTAA 2 cut(s) 1170, 1722
Sau3AI GATC 6 cut(s) 187, 269, 274, 280, 1259, 1885
Sau96I GGNCC 6 cut(s) 232, 474, 498, 499, 739, 1981
ScaI AGTACT 1 cut(s) 374
SchI GAGTC 3 cut(s) 1075, 1652, 1862
ScrFI CCNGG 8 cut(s) 114, 197, 267, 380, 1152, 1215, 1330, 1331
SduI GDGCHC 3 cut(s) 20, 123, 502
SfaNI GCATC 5 cut(s) 454, 1443, 1531, 1702, 1703
SfcI CTRYAG 2 cut(s) 45, 621
SfoI GGCGCC 1 cut(s) 988
SinI GGWCC 2 cut(s) 232, 1981
SmaI CCCGGG 1 cut(s) 1331
SmiMI CAYNNNNRTG 2 cut(s) 1200, 1362
SmlI CTYRAG 3 cut(s) 126, 303, 516
SmoI CTYRAG 3 cut(s) 126, 303, 516
SphI GCATGC 3 cut(s) 101, 1250, 1628
SseBI AGGCCT 1 cut(s) 1447
SsiI CCGC 9 cut(s) 406, 776, 1096, 1384, 1434, 1883, 1951, 2045, 2067
SspDI GGCGCC 1 cut(s) 986
SspI AATATT 1 cut(s) 674
SspMI CTAG 2 cut(s) 297, 1580
SstI GAGCTC 1 cut(s) 20
StuI AGGCCT 1 cut(s) 1447
StyD4I CCNGG 8 cut(s) 112, 195, 265, 378, 1150, 1213, 1328, 1329
StyI CCWWGG 2 cut(s) 1815, 2088
TaiI ACGT 2 cut(s) 1003, 1616
TaqI TCGA 1 cut(s) 1262
TatI WGTACW 4 cut(s) 372, 1297, 1468, 1486
TauI GCSGC 4 cut(s) 409, 1099, 2048, 2069
TfiI GAWTC 6 cut(s) 66, 769, 1264, 1637, 1822, 1975
Tru1I TTAA 2 cut(s) 1170, 1722
Tru9I TTAA 2 cut(s) 1170, 1722
TscAI CASTG 7 cut(s) 187, 347, 630, 936, 981, 1524, 2068
TseFI GTSAC 3 cut(s) 256, 931, 1041
Tsp45I GTSAC 3 cut(s) 256, 931, 1041
TspDTI ATGAA 5 cut(s) 899, 1335, 1352, 1451, 1763
TspMI CCCGGG 1 cut(s) 1329
TspRI CASTG 7 cut(s) 187, 347, 630, 936, 981, 1524, 2068
Van91I CCANNNNNTGG 1 cut(s) 1463
VneI GTGCAC 1 cut(s) 119
VpaK11BI GGWCC 2 cut(s) 232, 1981
VspI ATTAAT 1 cut(s) 1170
XapI RAATTY 2 cut(s) 537, 744
XceI RCATGY 8 cut(s) 101, 554, 716, 1015, 1250, 1361, 1628, 1838
XcmI CCANNNNNNNNNTGG 2 cut(s) 1427, 2078
XmaI CCCGGG 1 cut(s) 1329
XspI CTAG 2 cut(s) 297, 1580
ZrmI AGTACT 1 cut(s) 374
Zsp2I ATGCAT 1 cut(s) 1248
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.