Prupe.6G125700_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
Physical Location & Seq
Forward (+)
9635670 .. 9638422
2753 bp
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UTR
Exon/CDS
Intron
Prupe.6G125700.1

Sequence Viewer

Length: 495 bp
ATGAATGGTTTGAATGTTGCAGATGAAGGGACAAGTTTTAGTGTTGTGGTAGACACATTGGATGGTGATGCTTATGATGAATTTGAAGATAATGATGAAGATCTTAATGGGAATTATGAAGATGTGGATGAAGATAGTGATGGGAATTATGAAGATGTAGATGAAGATAATGATGGGAATTATGAAAACAATGATGAGGATGTTCAAGAGGATTTAATTGCTGATGCAGAGAAGCGTGCCGAACTGAAGTTTCAGTTCTTAAACTCTGACTATGAGCAAGAGAAGGCCAACCAAGAAGTAAATGTAGATGATTGTGACTTTGATAAGTATGTGGTATATGAAGGTGTTGAACCCCCACATAAAGAGCATGGTGAAGCATCTAGTGATGAGTACCATTACAATTTAAAGGATTTGAGAAGTTTTTCAGAAGAGGAACAACATGATGAAGTTGAAGGGGTGAAAAAGTGCAGTGCAAGGCCACAATGCTGTTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

165

Amino Acids

18.77

Weight (kDa)

4.05

Isoelectric Point (pI)

34.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0024542)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 51
AcsI RAATTY 1 cut(s) 80
AcuI CTGAAG 1 cut(s) 266
AfaI GTAC 1 cut(s) 392
AgsI TTSAA 5 cut(s) 13, 86, 206, 350, 452
AoxI GGCC 2 cut(s) 285, 476
ApoI RAATTY 1 cut(s) 80
Asp700I GAANNNNTTC 1 cut(s) 421
AsuHPI GGTGA 3 cut(s) 77, 383, 469
BccI CCATC 3 cut(s) 56, 134, 167
BfaI CTAG 1 cut(s) 381
BglII AGATCT 1 cut(s) 100
BmsI GCATC 3 cut(s) 58, 214, 386
BsaBI GATNNNNATC 1 cut(s) 99
Bse8I GATNNNNATC 1 cut(s) 99
BseGI GGATG 3 cut(s) 67, 133, 205
BseJI GATNNNNATC 1 cut(s) 99
BsgI GTGCAG 1 cut(s) 487
BshFI GGCC 2 cut(s) 287, 478
BslFI GGGAC 1 cut(s) 43
BsmFI GGGAC 1 cut(s) 43
BsnI GGCC 2 cut(s) 287, 478
Bsp143I GATC 1 cut(s) 100
BspANI GGCC 2 cut(s) 287, 478
BssMI GATC 1 cut(s) 100
Bst6I CTCTTC 1 cut(s) 423
BstC8I GCNNGC 1 cut(s) 237
BstF5I GGATG 3 cut(s) 67, 133, 205
BstKTI GATC 1 cut(s) 103
BstMBI GATC 1 cut(s) 100
BstX2I RGATCY 1 cut(s) 100
BstYI RGATCY 1 cut(s) 100
BsuRI GGCC 2 cut(s) 287, 478
BtsCI GGATG 3 cut(s) 67, 133, 205
BtsI GCAGTG 1 cut(s) 475
BtsIMutI CAGTG 1 cut(s) 475
Cac8I GCNNGC 1 cut(s) 237
Csp6I GTAC 1 cut(s) 391
CviAII CATG 2 cut(s) 368, 440
CviJI RGCY 2 cut(s) 287, 478
CviKI_1 RGCY 2 cut(s) 287, 478
CviQI GTAC 1 cut(s) 391
DpnI GATC 1 cut(s) 102
DpnII GATC 1 cut(s) 100
DraI TTTAAA 1 cut(s) 405
Eam1104I CTCTTC 1 cut(s) 423
EarI CTCTTC 1 cut(s) 423
Eco57I CTGAAG 1 cut(s) 266
FaeI CATG 2 cut(s) 371, 443
FaqI GGGAC 1 cut(s) 43
FatI CATG 2 cut(s) 367, 439
FblI GTMKAC 1 cut(s) 51
FokI GGATG 3 cut(s) 74, 140, 212
FspBI CTAG 1 cut(s) 381
HaeIII GGCC 2 cut(s) 287, 478
Hin1II CATG 2 cut(s) 371, 443
HphI GGTGA 3 cut(s) 77, 383, 469
Hpy166II GTNNAC 1 cut(s) 52
Hpy188I TCNGA 2 cut(s) 268, 427
Hpy188III TCNNGA 1 cut(s) 206
Hpy8I GTNNAC 1 cut(s) 52
HpyAV CCTTC 4 cut(s) 20, 277, 335, 446
HpyCH4V TGCA 4 cut(s) 20, 227, 468, 473
Hsp92II CATG 2 cut(s) 371, 443
Kzo9I GATC 1 cut(s) 100
LweI GCATC 3 cut(s) 58, 214, 386
MaeI CTAG 1 cut(s) 381
MaeIII GTNAC 1 cut(s) 314
MalI GATC 1 cut(s) 102
MboI GATC 1 cut(s) 100
MboII GAAGA 7 cut(s) 98, 110, 131, 143, 164, 176, 440
MflI RGATCY 1 cut(s) 100
MluCI AATT 6 cut(s) 80, 112, 145, 178, 216, 400
MnlI CCTC 3 cut(s) 190, 202, 424
MroXI GAANNNNTTC 1 cut(s) 421
MseI TTAA 4 cut(s) 105, 215, 260, 404
NdeII GATC 1 cut(s) 100
NlaIII CATG 2 cut(s) 371, 443
NmuCI GTSAC 1 cut(s) 314
PdmI GAANNNNTTC 1 cut(s) 421
PsuI RGATCY 1 cut(s) 100
RsaI GTAC 1 cut(s) 392
RsaNI GTAC 1 cut(s) 391
SaqAI TTAA 4 cut(s) 105, 215, 260, 404
Sau3AI GATC 1 cut(s) 100
SetI ASST 1 cut(s) 346
SfaNI GCATC 3 cut(s) 58, 214, 386
SgeI CNNG 9 cut(s) 45, 218, 248, 290, 305, 380, 393, 452, 486
Sse9I AATT 6 cut(s) 80, 112, 145, 178, 216, 400
SspMI CTAG 1 cut(s) 381
TasI AATT 6 cut(s) 80, 112, 145, 178, 216, 400
Tru1I TTAA 4 cut(s) 105, 215, 260, 404
Tru9I TTAA 4 cut(s) 105, 215, 260, 404
TscAI CASTG 1 cut(s) 475
TseFI GTSAC 1 cut(s) 314
Tsp45I GTSAC 1 cut(s) 314
TspRI CASTG 1 cut(s) 475
XapI RAATTY 1 cut(s) 80
XmiI GTMKAC 1 cut(s) 51
XmnI GAANNNNTTC 1 cut(s) 421
XspI CTAG 1 cut(s) 381
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.