Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0016951

Physical Location & Seq

Genomic Coordinates Forward (+)

13711821 .. 13718592

Gene Structure 6772 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G156000.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 834 bp

ATGGGGTTTCAGACTATGGCTTCTCAAGGTAACGGCCAGCAGTCTCATTTTCAGCCGTCTCCATTGTTGAGGCAGCCCTCATGGTATAGCCTCACTCTTGATGAAGTTAAAAATCAATTAGGAGACACGGGAAAGCCACTGGGCAGCATGAATCTTGACGAGCTTCTACAGAACTTATGGACTGCTGAAGCAAATCAATCCATTGAGATGGATATTGAGAACACCTCCTCAGCATCTTCACTCCAACGTCAGGCCAGCTTAACATTGGCTAGAGCTTTGAGTGGGAAGACGGTTGATGAGGTATGGAGAGAGATCCAGCAAGGGCAGAAGAAAAGGTATGGGGAGGACATGAAATGTCAGGATACTGAGATAACACTCGGTGAAACAACTCTAGAAGACTTCTTGGTACAAGCAGGACTTTTTGCAGAAGCTTCTTTGAGTCCTGCTATTGCATTGGATACTATTGAAGTGGCCATCCCTCAGAGTTATCCACATAACCTGGGGTTATCGTCATCCCCATCATTTGGTACACATTCGGATACAACGACGCCCGGGCGTAAAAGGGATGCATCAGATGCATATGAGAAGACTGTTGAGAGAAGATTAAGGAGAAAAATCAAGAACAGAGAATCTGCTGCACGTTCACGTGCTAGAAAGCAGGCATATCATAATGAGTTGGTGAGCAAAGTTTCGCGTCTAGAAGAGGAGAACATAAAGCTCAAGAAAGAGAAGGAATTTGAGAAGATGTTGCCATCTGCATTATCAGCGGAACCAAAATATCAGCTTCGAAGAATAAGTTCTCATCACCAGATGGCTGGTCGGTCCTGCCACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009719 GO:0009725 GO:0009737 GO:0009889 GO:0010033 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0033993 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0097305 GO:0140110 GO:1901363 GO:1901700 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

ko04075 map04075

Pfam Domains

Protein Families

bZIP_1

Protein Analysis

278

Amino Acids

31.09

Weight (kDa)

7.79

Isoelectric Point (pI)

62.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016951)

Species	Orthologous Gene IDs
prunus_persica	Prupe.6G156000_v2.0.a1 Prupe.6G156000_v2.0.a1 Prupe.6G156000_v2.0.a1 Prupe.6G156000_v2.0.a1 Prupe.6G156000_v2.0.a1 Prupe.6G156000_v2.0.a1 Prupe.6G156000_v2.0.a1 Prupe.6G156000_v2.0.a1 Prupe.6G156000_v2.0.a1 Prupe.6G156000_v2.0.a1 Prupe.6G156000_v2.0.a1 Prupe.6G156000_v2.0.a1 Prupe.6G156000_v2.0.a1 Prupe.6G156000_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	524
AccII	CGCG	1 cut(s)	694
AciI	CCGC	1 cut(s)	767
AclWI	GGATC	1 cut(s)	307
AcoI	YGGCCR	2 cut(s)	34, 471
AcsI	RAATTY	1 cut(s)	734
AcuI	CTGAAG	1 cut(s)	207
AcvI	CACGTG	1 cut(s)	647
AcyI	GRCGYC	1 cut(s)	548
AdeI	CACNNNGTG	1 cut(s)	380
AfaI	GTAC	2 cut(s)	408, 529
AfiI	CCNNNNNNNGG	2 cut(s)	250, 524
AgsI	TTSAA	1 cut(s)	467
AjnI	CCWGG	1 cut(s)	498
AluBI	AGCT	6 cut(s)	163, 258, 275, 431, 718, 784
AluI	AGCT	6 cut(s)	163, 258, 275, 431, 718, 784
Alw26I	GTCTC	3 cut(s)	48, 63, 117
AlwI	GGATC	1 cut(s)	307
Ama87I	CYCGRG	1 cut(s)	551
AoxI	GGCC	3 cut(s)	34, 252, 471
ApeKI	GCWGC	3 cut(s)	73, 144, 635
ApoI	RAATTY	1 cut(s)	734
Asp700I	GAANNNNTTC	1 cut(s)	796
AspS9I	GGNCC	1 cut(s)	822
AsuC2I	CCSGG	2 cut(s)	552, 553
AsuHPI	GGTGA	3 cut(s)	392, 691, 797
AsuII	TTCGAA	1 cut(s)	787
AvaI	CYCGRG	1 cut(s)	551
AvaII	GGWCC	1 cut(s)	822
BalI	TGGCCA	1 cut(s)	473
BbrPI	CACGTG	1 cut(s)	647
BbsI	GAAGAC	3 cut(s)	293, 402, 593
BbvCI	CCTCAGC	1 cut(s)	229
BbvI	GCAGC	3 cut(s)	85, 156, 622
BccI	CCATC	5 cut(s)	202, 482, 526, 760, 805
BceAI	ACGGC	2 cut(s)	40, 49
BciT130I	CCWGG	1 cut(s)	500
BciVI	GTATCC	3 cut(s)	355, 451, 532
BcnI	CCSGG	2 cut(s)	552, 553
BcoDI	GTCTC	3 cut(s)	48, 63, 117
BfaI	CTAG	4 cut(s)	270, 392, 651, 698
BfmI	CTRYAG	1 cut(s)	167
BfuI	GTATCC	3 cut(s)	355, 451, 532
BisI	GCNGC	3 cut(s)	74, 145, 636
BlsI	GCNGC	3 cut(s)	75, 146, 637
Bme1390I	CCNGG	3 cut(s)	500, 552, 553
Bme18I	GGWCC	1 cut(s)	822
BmeT110I	CYCGRG	1 cut(s)	551
BmgT120I	GGNCC	1 cut(s)	822
BmiI	GGNNCC	1 cut(s)	771
BmrFI	CCNGG	3 cut(s)	500, 552, 553
BmrI	ACTGGG	1 cut(s)	149
BmsI	GCATC	4 cut(s)	242, 556, 565, 578
BmuI	ACTGGG	1 cut(s)	149
BpiI	GAAGAC	3 cut(s)	293, 402, 593
BplI	GAGNNNNNCTC	2 cut(s)	209, 241
Bpu10I	CCTNAGC	1 cut(s)	229
Bpu14I	TTCGAA	1 cut(s)	787
BpuEI	CTTGAG	2 cut(s)	9, 704
BpuMI	CCSGG	2 cut(s)	552, 553
BsaAI	YACGTR	1 cut(s)	647
BsaHI	GRCGYC	1 cut(s)	548
BsaJI	CCNNGG	2 cut(s)	499, 551
Bsc4I	CCNNNNNNNGG	2 cut(s)	250, 524
Bse1I	ACTGG	1 cut(s)	144
BseBI	CCWGG	1 cut(s)	500
BseDI	CCNNGG	2 cut(s)	499, 551
BseGI	GGATG	3 cut(s)	474, 512, 571
BseLI	CCNNNNNNNGG	2 cut(s)	250, 524
BseMII	CTCAG	3 cut(s)	243, 357, 494
BseNI	ACTGG	1 cut(s)	144
BseRI	GAGGAG	2 cut(s)	217, 719
BseXI	GCAGC	3 cut(s)	85, 156, 622
BsgI	GTGCAG	1 cut(s)	621
Bsh1236I	CGCG	1 cut(s)	694
BshFI	GGCC	3 cut(s)	36, 254, 473
BsiHKCI	CYCGRG	1 cut(s)	551
BsiSI	CCGG	1 cut(s)	552
BslI	CCNNNNNNNGG	2 cut(s)	250, 524
BsmAI	GTCTC	3 cut(s)	48, 63, 117
BsmBI	CGTCTC	1 cut(s)	63
BsnI	GGCC	3 cut(s)	36, 254, 473
BsoBI	CYCGRG	1 cut(s)	551
Bsp119I	TTCGAA	1 cut(s)	787
Bsp143I	GATC	1 cut(s)	312
BspACI	CCGC	1 cut(s)	767
BspANI	GGCC	3 cut(s)	36, 254, 473
BspCNI	CTCAG	3 cut(s)	242, 358, 493
BspFNI	CGCG	1 cut(s)	694
BspLI	GGNNCC	1 cut(s)	771
BspPI	GGATC	1 cut(s)	307
BspT104I	TTCGAA	1 cut(s)	787
BsrI	ACTGG	1 cut(s)	144
BssECI	CCNNGG	2 cut(s)	499, 551
BssMI	GATC	1 cut(s)	312
BssNI	GRCGYC	1 cut(s)	548
Bst2UI	CCWGG	1 cut(s)	500
Bst4CI	ACNGT	2 cut(s)	292, 592
Bst6I	CTCTTC	1 cut(s)	696
BstACI	GRCGYC	1 cut(s)	548
BstAPI	GCANNNNNTGC	1 cut(s)	575
BstBAI	YACGTR	1 cut(s)	647
BstBI	TTCGAA	1 cut(s)	787
BstC8I	GCNNGC	3 cut(s)	38, 256, 660
BstDEI	CTNAG	3 cut(s)	229, 366, 480
BstF5I	GGATG	3 cut(s)	474, 512, 571
BstFNI	CGCG	1 cut(s)	694
BstKTI	GATC	1 cut(s)	315
BstMAI	GTCTC	3 cut(s)	48, 63, 117
BstMBI	GATC	1 cut(s)	312
BstMWI	GCNNNNNNNGC	2 cut(s)	575, 764
BstNI	CCWGG	1 cut(s)	500
BstSCI	CCNGG	3 cut(s)	498, 550, 551
BstSFI	CTRYAG	1 cut(s)	167
BstUI	CGCG	1 cut(s)	694
BstV1I	GCAGC	3 cut(s)	85, 156, 622
BstV2I	GAAGAC	3 cut(s)	293, 402, 593
BstX2I	RGATCY	1 cut(s)	312
BstXI	CCANNNNNNTGG	2 cut(s)	208, 815
BstYI	RGATCY	1 cut(s)	312
BsuI	GTATCC	3 cut(s)	355, 451, 532
BsuRI	GGCC	3 cut(s)	36, 254, 473
BtsCI	GGATG	3 cut(s)	474, 512, 571
BtsIMutI	CAGTG	2 cut(s)	137, 829
Cac8I	GCNNGC	3 cut(s)	38, 256, 660
Cfr13I	GGNCC	1 cut(s)	822
Cfr9I	CCCGGG	1 cut(s)	551
CseI	GACGC	2 cut(s)	556, 683
Csp6I	GTAC	2 cut(s)	407, 528
CviAII	CATG	3 cut(s)	81, 148, 349
CviQI	GTAC	2 cut(s)	407, 528
DdeI	CTNAG	3 cut(s)	229, 366, 480
DpnI	GATC	1 cut(s)	314
DpnII	GATC	1 cut(s)	312
DraIII	CACNNNGTG	1 cut(s)	380
EaeI	YGGCCR	2 cut(s)	34, 471
Eam1104I	CTCTTC	1 cut(s)	696
EarI	CTCTTC	1 cut(s)	696
Eco47I	GGWCC	1 cut(s)	822
Eco57I	CTGAAG	1 cut(s)	207
Eco72I	CACGTG	1 cut(s)	647
Eco88I	CYCGRG	1 cut(s)	551
EcoRII	CCWGG	1 cut(s)	498
EcoT22I	ATGCAT	2 cut(s)	571, 580
Esp3I	CGTCTC	1 cut(s)	63
FaeI	CATG	3 cut(s)	84, 151, 352
FalI	AAGNNNNNCTT	2 cut(s)	402, 434
FatI	CATG	3 cut(s)	80, 147, 348
FauNDI	CATATG	1 cut(s)	580
Fnu4HI	GCNGC	3 cut(s)	74, 145, 636
FokI	GGATG	3 cut(s)	461, 499, 578
Fsp4HI	GCNGC	3 cut(s)	74, 145, 636
FspBI	CTAG	4 cut(s)	270, 392, 651, 698
GluI	GCNGC	3 cut(s)	74, 145, 636
HaeIII	GGCC	3 cut(s)	36, 254, 473
HapII	CCGG	1 cut(s)	552
HgaI	GACGC	2 cut(s)	556, 683
Hin1I	GRCGYC	1 cut(s)	548
Hin1II	CATG	3 cut(s)	84, 151, 352
HindIII	AAGCTT	1 cut(s)	429
HinfI	GANTC	3 cut(s)	151, 439, 629
HpaII	CCGG	1 cut(s)	552
HphI	GGTGA	3 cut(s)	392, 691, 797
Hpy166II	GTNNAC	2 cut(s)	530, 644
Hpy188I	TCNGA	4 cut(s)	12, 483, 538, 574
Hpy188III	TCNNGA	7 cut(s)	98, 155, 359, 392, 619, 698, 721
Hpy8I	GTNNAC	2 cut(s)	530, 644
Hpy99I	CGWCG	1 cut(s)	550
HpyAV	CCTTC	1 cut(s)	724
HpyCH4III	ACNGT	2 cut(s)	292, 592
HpyCH4IV	ACGT	3 cut(s)	247, 640, 646
HpyCH4V	TGCA	6 cut(s)	425, 452, 569, 578, 638, 758
HpyF10VI	GCNNNNNNNGC	2 cut(s)	575, 764
HpyF3I	CTNAG	3 cut(s)	229, 366, 480
HpySE526I	ACGT	3 cut(s)	247, 640, 646
Hsp92I	GRCGYC	1 cut(s)	548
Hsp92II	CATG	3 cut(s)	84, 151, 352
Kzo9I	GATC	1 cut(s)	312
Lsp1109I	GCAGC	3 cut(s)	85, 156, 622
LweI	GCATC	4 cut(s)	242, 556, 565, 578
MaeI	CTAG	4 cut(s)	270, 392, 651, 698
MaeII	ACGT	3 cut(s)	247, 640, 646
MaeIII	GTNAC	1 cut(s)	29
MalI	GATC	1 cut(s)	314
MboI	GATC	1 cut(s)	312
MboII	GAAGA	9 cut(s)	228, 298, 340, 407, 598, 612, 713, 754, 801
MflI	RGATCY	1 cut(s)	312
MlsI	TGGCCA	1 cut(s)	473
MluCI	AATT	2 cut(s)	116, 734
MluNI	TGGCCA	1 cut(s)	473
MlyI	GAGTC	1 cut(s)	448
MmeI	TCCRAC	1 cut(s)	268
MnlI	CCTC	9 cut(s)	63, 88, 101, 235, 238, 292, 337, 489, 697
Mox20I	TGGCCA	1 cut(s)	473
Mph1103I	ATGCAT	2 cut(s)	571, 580
MroXI	GAANNNNTTC	1 cut(s)	796
MscI	TGGCCA	1 cut(s)	473
MseI	TTAA	3 cut(s)	108, 260, 605
MslI	CAYNNNNRTG	1 cut(s)	206
Msp20I	TGGCCA	1 cut(s)	473
MspA1I	CMGCKG	1 cut(s)	767
MspI	CCGG	1 cut(s)	552
MspR9I	CCNGG	3 cut(s)	500, 552, 553
MvaI	CCWGG	1 cut(s)	500
MvnI	CGCG	1 cut(s)	694
MwoI	GCNNNNNNNGC	2 cut(s)	575, 764
NciI	CCSGG	2 cut(s)	552, 553
NdeI	CATATG	1 cut(s)	580
NdeII	GATC	1 cut(s)	312
NlaIII	CATG	3 cut(s)	84, 151, 352
NlaIV	GGNNCC	1 cut(s)	771
NsiI	ATGCAT	2 cut(s)	571, 580
NspV	TTCGAA	1 cut(s)	787
PcsI	WCGNNNNNNNCGW	1 cut(s)	542
PdmI	GAANNNNTTC	1 cut(s)	796
PfeI	GAWTC	2 cut(s)	151, 629
PflMI	CCANNNNNTGG	1 cut(s)	524
PkrI	GCNGC	3 cut(s)	75, 146, 637
PleI	GAGTC	1 cut(s)	447
PmaCI	CACGTG	1 cut(s)	647
PmlI	CACGTG	1 cut(s)	647
PpsI	GAGTC	1 cut(s)	447
Ppu21I	YACGTR	1 cut(s)	647
Psp6I	CCWGG	1 cut(s)	498
PspCI	CACGTG	1 cut(s)	647
PspGI	CCWGG	1 cut(s)	498
PspN4I	GGNNCC	1 cut(s)	771
PspPI	GGNCC	1 cut(s)	822
PsuI	RGATCY	1 cut(s)	312
RsaI	GTAC	2 cut(s)	408, 529
RsaNI	GTAC	2 cut(s)	407, 528
RseI	CAYNNNNRTG	1 cut(s)	206
SaqAI	TTAA	3 cut(s)	108, 260, 605
SatI	GCNGC	3 cut(s)	74, 145, 636
Sau3AI	GATC	1 cut(s)	312
Sau96I	GGNCC	1 cut(s)	822
SchI	GAGTC	1 cut(s)	448
ScrFI	CCNGG	3 cut(s)	500, 552, 553
SfaNI	GCATC	4 cut(s)	242, 556, 565, 578
SfcI	CTRYAG	1 cut(s)	167
SfuI	TTCGAA	1 cut(s)	787
SinI	GGWCC	1 cut(s)	822
SmaI	CCCGGG	1 cut(s)	553
SmiMI	CAYNNNNRTG	1 cut(s)	206
SmlI	CTYRAG	2 cut(s)	24, 719
SmoI	CTYRAG	2 cut(s)	24, 719
SrfI	GCCCGGGC	1 cut(s)	553
Sse9I	AATT	2 cut(s)	116, 734
SsiI	CCGC	1 cut(s)	767
SspMI	CTAG	4 cut(s)	270, 392, 651, 698
StyD4I	CCNGG	3 cut(s)	498, 550, 551
TaaI	ACNGT	2 cut(s)	292, 592
TaiI	ACGT	3 cut(s)	250, 643, 649
TaqI	TCGA	1 cut(s)	787
TaqII	GACCGA	1 cut(s)	810
TasI	AATT	2 cut(s)	116, 734
TfiI	GAWTC	2 cut(s)	151, 629
Tru1I	TTAA	3 cut(s)	108, 260, 605
Tru9I	TTAA	3 cut(s)	108, 260, 605
TscAI	CASTG	1 cut(s)	144
TseI	GCWGC	3 cut(s)	73, 144, 635
TspDTI	ATGAA	3 cut(s)	117, 164, 365
TspMI	CCCGGG	1 cut(s)	551
TspRI	CASTG	1 cut(s)	144
Van91I	CCANNNNNTGG	1 cut(s)	524
VpaK11BI	GGWCC	1 cut(s)	822
XapI	RAATTY	1 cut(s)	734
XbaI	TCTAGA	2 cut(s)	391, 697
XcmI	CCANNNNNNNNNTGG	1 cut(s)	262
XmaI	CCCGGG	1 cut(s)	551
XmnI	GAANNNNTTC	1 cut(s)	796
XspI	CTAG	4 cut(s)	270, 392, 651, 698
Zsp2I	ATGCAT	2 cut(s)	571, 580

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.