Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0029030

Physical Location & Seq

Genomic Coordinates Reverse (-)

26544259 .. 26545672

Gene Structure 1414 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G286700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1134 bp

ATGGCGGAGAAGGTGATTGTTGTGAGCATAAGGGAGTCCGCGGTGGTCAGGCCAGCTGAGGAGTCGACGACCCCTCAGGGGTCGCTGTGGTTCTCCAACTCGGATCTAGCATTCAATAACTATCACGCGTCCGCTGTTTACTTTTACAGACCAAGTGCAAGTAGTGACCTCAACTTCTTTAACTCGGGACTTCTCAATCAGGCGCTCAGCAAAGCCCTCCTCAACCACCACAACGGCCGTCTGGAGATTGATTGCAATTCACAAGGGGTGCTCTTTGCTGTGGAGGAGAGCAACTGTGCCTTGGATGATTTTGGCGATTTTGCGCCCACTTCCGATTTTCGTACCCTCATCCCCGCCGTTGATTACTCCGGTGGGATATCCTCATATCCCATATTGGTGTTACAGACGTTACTTCGTGCCCGAAACCCACCTCAGCCTACATTCCCCCGCATTGAATATCAACCTTCTCCCCAAATGAAATTACCTTGTCATCATCTGAAAAACATAAATACTATTGCGTCCATTTTTAGATTTACGCGAGAGCAGCTCAACATTTTGAAAGCCAACTCATTTGAGATGTTGGCAGGTCATATCTGGAGATGTGCTTGCAAGGCACGTAAACTTGCGGATGATCAAGACACCAAAGTACTCATTCCCATTAATGGACGGTCCAAATTGCAACTCCCACTCCCACCTGGTTTCTTTGGCAATGTCGCTTTCAGAGCCGCACCAATTGCTGCAGCGGGGGATCTCATTGACGATGATTATCTCAAATCAGCCCTTGACTATCTTGAGCTTCATCGTCCTTGTGCTTCCCCACTTGTTATGGGGCCTCTTTCAATTAGGTGCCCCAATCTCCGGATAAACAGTTGGATTAGGCTACCGATTTATGATGCTGATTTTGGATGTGGTCGACCCATTTTCATGGGGCCTGCTGCATTATTTGACGGGATGTGTTTGTTCTTACCAATTGCAAGTAATGATGGGAATTTATCTTTCATGATTTCTCTGCCATCTGAGCACATGAAATCATTTTCCAACTTCTTGTATGACAATCAGGGGCACAATTTTAAGATTGCCCCCCAAATTATAACCTTGTTTTATTATATGATGTTATTTATTTATTTGGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006725 GO:0008150 GO:0008152 GO:0008374 GO:0009058 GO:0009698 GO:0009699 GO:0009808 GO:0009809 GO:0009889 GO:0009891 GO:0009893 GO:0009962 GO:0009963 GO:0009987 GO:0010252 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0019222 GO:0019438 GO:0019748 GO:0042592 GO:0044237 GO:0044249 GO:0044424 GO:0044444 GO:0044464 GO:0044550 GO:0047172 GO:0047205 GO:0048518 GO:0048878 GO:0050734 GO:0050737 GO:0050789 GO:0065007 GO:0065008 GO:0071704 GO:0080090 GO:1901360 GO:1901362 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00940 ko00941 ko00945 ko01100 ko01110 map00940 map00941 map00945 map01100 map01110

Pfam Domains

Protein Families

Transferase

Protein Analysis

378

Amino Acids

42.09

Weight (kDa)

6.5

Isoelectric Point (pI)

44.93

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0029030)

Species	Orthologous Gene IDs
prunus_persica	Prupe.3G101100_v2.0.a1 Prupe.6G286700_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1091
Acc36I	ACCTGC	1 cut(s)	575
AccB1I	GGYRCC	1 cut(s)	846
AccI	GTMKAC	2 cut(s)	65, 913
AccII	CGCG	3 cut(s)	41, 128, 538
AccIII	TCCGGA	1 cut(s)	858
AciI	CCGC	9 cut(s)	5, 39, 41, 132, 354, 448, 626, 726, 743
AclWI	GGATC	2 cut(s)	111, 756
AcoI	YGGCCR	1 cut(s)	235
AcsI	RAATTY	1 cut(s)	988
AfaI	GTAC	2 cut(s)	343, 648
AfiI	CCNNNNNNNGG	3 cut(s)	78, 662, 858
AflIII	ACRYGT	1 cut(s)	126
AgsI	TTSAA	4 cut(s)	115, 455, 559, 840
AjnI	CCWGG	1 cut(s)	694
AluBI	AGCT	3 cut(s)	56, 547, 796
AluI	AGCT	3 cut(s)	56, 547, 796
Alw21I	GWGCWC	2 cut(s)	273, 1023
AlwI	GGATC	2 cut(s)	111, 756
Ama87I	CYCGRG	1 cut(s)	184
Aor13HI	TCCGGA	1 cut(s)	858
AoxI	GGCC	4 cut(s)	50, 235, 830, 929
ApeKI	GCWGC	4 cut(s)	544, 737, 740, 935
ApoI	RAATTY	1 cut(s)	988
AseI	ATTAAT	1 cut(s)	660
AspLEI	GCGC	2 cut(s)	205, 325
AspS9I	GGNCC	3 cut(s)	669, 830, 929
AsuHPI	GGTGA	1 cut(s)	25
AvaI	CYCGRG	1 cut(s)	184
AvaII	GGWCC	1 cut(s)	669
AxyI	CCTNAGG	1 cut(s)	75
BaeGI	GKGCMC	3 cut(s)	421, 851, 1065
BanI	GGYRCC	1 cut(s)	846
Bbv12I	GWGCWC	2 cut(s)	273, 1023
BbvCI	CCTCAGC	2 cut(s)	57, 432
BbvI	GCAGC	4 cut(s)	556, 724, 752, 922
BccI	CCATC	2 cut(s)	977, 1021
BceAI	ACGGC	3 cut(s)	222, 250, 341
BciT130I	CCWGG	1 cut(s)	696
BclI	TGATCA	1 cut(s)	631
BfaI	CTAG	1 cut(s)	107
BfmI	CTRYAG	1 cut(s)	738
BfoI	RGCGCY	1 cut(s)	206
BfuAI	ACCTGC	1 cut(s)	575
BisI	GCNGC	5 cut(s)	545, 726, 738, 741, 936
BlpI	GCTNAGC	1 cut(s)	206
BlsI	GCNGC	5 cut(s)	546, 727, 739, 742, 937
BmcAI	AGTACT	1 cut(s)	648
Bme1390I	CCNGG	1 cut(s)	696
Bme18I	GGWCC	1 cut(s)	669
BmeT110I	CYCGRG	1 cut(s)	184
BmgT120I	GGNCC	3 cut(s)	669, 830, 929
BmiI	GGNNCC	3 cut(s)	831, 848, 930
BmrFI	CCNGG	1 cut(s)	696
BmsI	GCATC	1 cut(s)	883
BplI	GAGNNNNNCTC	2 cut(s)	531, 563
BpmI	CTGGAG	2 cut(s)	263, 616
Bpu10I	CCTNAGC	2 cut(s)	57, 432
Bpu1102I	GCTNAGC	1 cut(s)	206
BpuEI	CTTGAG	1 cut(s)	812
BsaAI	YACGTR	1 cut(s)	617
BsaBI	GATNNNNATC	1 cut(s)	765
BsaJI	CCNNGG	2 cut(s)	39, 300
BsaWI	WCCGGW	2 cut(s)	368, 858
BsaXI	ACNNNNNCTCC	2 cut(s)	672, 702
Bsc4I	CCNNNNNNNGG	3 cut(s)	78, 662, 858
Bse21I	CCTNAGG	1 cut(s)	75
Bse3DI	GCAATG	1 cut(s)	715
Bse8I	GATNNNNATC	1 cut(s)	765
BseAI	TCCGGA	1 cut(s)	858
BseBI	CCWGG	1 cut(s)	696
BseDI	CCNNGG	2 cut(s)	39, 300
BseGI	GGATG	5 cut(s)	310, 348, 634, 911, 957
BseJI	GATNNNNATC	1 cut(s)	765
BseLI	CCNNNNNNNGG	3 cut(s)	78, 662, 858
BseMI	GCAATG	1 cut(s)	715
BseMII	CTCAG	5 cut(s)	48, 89, 220, 446, 1008
BseRI	GAGGAG	3 cut(s)	74, 209, 299
BseSI	GKGCMC	3 cut(s)	421, 851, 1065
BseX3I	CGGCCG	1 cut(s)	235
BseXI	GCAGC	4 cut(s)	556, 724, 752, 922
Bsh1236I	CGCG	3 cut(s)	41, 128, 538
Bsh1285I	CGRYCG	1 cut(s)	238
BshFI	GGCC	4 cut(s)	52, 237, 832, 931
BshNI	GGYRCC	1 cut(s)	846
BsiEI	CGRYCG	1 cut(s)	238
BsiHKAI	GWGCWC	2 cut(s)	273, 1023
BsiHKCI	CYCGRG	1 cut(s)	184
BsiSI	CCGG	2 cut(s)	369, 859
BslFI	GGGAC	1 cut(s)	201
BslI	CCNNNNNNNGG	3 cut(s)	78, 662, 858
BsmFI	GGGAC	1 cut(s)	201
BsmI	GAATGC	1 cut(s)	110
BsnI	GGCC	4 cut(s)	52, 237, 832, 931
BsoBI	CYCGRG	1 cut(s)	184
Bsp1286I	GDGCHC	5 cut(s)	273, 421, 851, 1023, 1065
Bsp13I	TCCGGA	1 cut(s)	858
Bsp143I	GATC	3 cut(s)	103, 631, 748
Bsp1720I	GCTNAGC	1 cut(s)	206
BspACI	CCGC	9 cut(s)	5, 39, 41, 132, 354, 448, 626, 726, 743
BspANI	GGCC	4 cut(s)	52, 237, 832, 931
BspCNI	CTCAG	5 cut(s)	49, 88, 219, 445, 1009
BspEI	TCCGGA	1 cut(s)	858
BspFNI	CGCG	3 cut(s)	41, 128, 538
BspHI	TCATGA	1 cut(s)	999
BspLI	GGNNCC	3 cut(s)	831, 848, 930
BspMAI	CTGCAG	1 cut(s)	742
BspMI	ACCTGC	1 cut(s)	575
BspPI	GGATC	2 cut(s)	111, 756
BspT107I	GGYRCC	1 cut(s)	846
BsrDI	GCAATG	1 cut(s)	715
BssECI	CCNNGG	2 cut(s)	39, 300
BssMI	GATC	3 cut(s)	103, 631, 748
BssT1I	CCWWGG	1 cut(s)	300
Bst2UI	CCWGG	1 cut(s)	696
Bst4CI	ACNGT	3 cut(s)	296, 669, 869
BstAPI	GCANNNNNTGC	1 cut(s)	734
BstBAI	YACGTR	1 cut(s)	617
BstC8I	GCNNGC	3 cut(s)	54, 607, 933
BstDEI	CTNAG	5 cut(s)	57, 75, 206, 432, 1017
BstDSI	CCRYGG	1 cut(s)	39
BstF5I	GGATG	5 cut(s)	310, 348, 634, 911, 957
BstFNI	CGCG	3 cut(s)	41, 128, 538
BstH2I	RGCGCY	1 cut(s)	206
BstHHI	GCGC	2 cut(s)	205, 325
BstKTI	GATC	3 cut(s)	106, 634, 751
BstMBI	GATC	3 cut(s)	103, 631, 748
BstMCI	CGRYCG	1 cut(s)	238
BstMWI	GCNNNNNNNGC	5 cut(s)	544, 611, 722, 734, 1018
BstNI	CCWGG	1 cut(s)	696
BstSCI	CCNGG	1 cut(s)	694
BstSFI	CTRYAG	1 cut(s)	738
BstSLI	GKGCMC	3 cut(s)	421, 851, 1065
BstUI	CGCG	3 cut(s)	41, 128, 538
BstV1I	GCAGC	4 cut(s)	556, 724, 752, 922
BstX2I	RGATCY	2 cut(s)	103, 748
BstXI	CCANNNNNNTGG	1 cut(s)	925
BstYI	RGATCY	2 cut(s)	103, 748
BstZI	CGGCCG	1 cut(s)	235
Bsu36I	CCTNAGG	1 cut(s)	75
BsuRI	GGCC	4 cut(s)	52, 237, 832, 931
BtgI	CCRYGG	1 cut(s)	39
BtsCI	GGATG	5 cut(s)	310, 348, 634, 911, 957
BveI	ACCTGC	1 cut(s)	575
Cac8I	GCNNGC	3 cut(s)	54, 607, 933
CciI	TCATGA	1 cut(s)	999
CfoI	GCGC	2 cut(s)	205, 325
Cfr13I	GGNCC	3 cut(s)	669, 830, 929
Cfr42I	CCGCGG	1 cut(s)	42
CseI	GACGC	2 cut(s)	117, 507
CsiI	ACCWGGT	1 cut(s)	694
Csp6I	GTAC	2 cut(s)	342, 647
CviAII	CATG	3 cut(s)	925, 1000, 1024
CviQI	GTAC	2 cut(s)	342, 647
DdeI	CTNAG	5 cut(s)	57, 75, 206, 432, 1017
DpnI	GATC	3 cut(s)	105, 633, 750
DpnII	GATC	3 cut(s)	103, 631, 748
EaeI	YGGCCR	1 cut(s)	235
EagI	CGGCCG	1 cut(s)	235
EciI	GGCGGA	1 cut(s)	20
EclXI	CGGCCG	1 cut(s)	235
Eco130I	CCWWGG	1 cut(s)	300
Eco32I	GATATC	1 cut(s)	378
Eco47I	GGWCC	1 cut(s)	669
Eco52I	CGGCCG	1 cut(s)	235
Eco81I	CCTNAGG	1 cut(s)	75
Eco88I	CYCGRG	1 cut(s)	184
EcoO109I	RGGNCCY	2 cut(s)	830, 929
EcoRII	CCWGG	1 cut(s)	694
EcoRV	GATATC	1 cut(s)	378
EcoT14I	CCWWGG	1 cut(s)	300
ErhI	CCWWGG	1 cut(s)	300
FaeI	CATG	3 cut(s)	928, 1003, 1027
FaqI	GGGAC	1 cut(s)	201
FatI	CATG	3 cut(s)	924, 999, 1023
FauI	CCCGC	3 cut(s)	361, 455, 736
FbaI	TGATCA	1 cut(s)	631
FblI	GTMKAC	2 cut(s)	65, 913
Fnu4HI	GCNGC	5 cut(s)	545, 726, 738, 741, 936
FokI	GGATG	5 cut(s)	317, 335, 641, 918, 964
Fsp4HI	GCNGC	5 cut(s)	545, 726, 738, 741, 936
FspBI	CTAG	1 cut(s)	107
GlaI	GCGC	2 cut(s)	204, 324
GluI	GCNGC	5 cut(s)	545, 726, 738, 741, 936
GsuI	CTGGAG	2 cut(s)	263, 616
HaeII	RGCGCY	1 cut(s)	206
HaeIII	GGCC	4 cut(s)	52, 237, 832, 931
HapII	CCGG	2 cut(s)	369, 859
HgaI	GACGC	2 cut(s)	117, 507
HhaI	GCGC	2 cut(s)	205, 325
Hin1II	CATG	3 cut(s)	928, 1003, 1027
Hin6I	GCGC	2 cut(s)	203, 323
HinP1I	GCGC	2 cut(s)	203, 323
HincII	GTYRAC	2 cut(s)	66, 914
HindII	GTYRAC	2 cut(s)	66, 914
HinfI	GANTC	2 cut(s)	35, 62
HpaII	CCGG	2 cut(s)	369, 859
HphI	GGTGA	1 cut(s)	25
Hpy166II	GTNNAC	4 cut(s)	66, 139, 620, 914
Hpy188I	TCNGA	5 cut(s)	103, 334, 498, 722, 1018
Hpy188III	TCNNGA	7 cut(s)	186, 242, 595, 635, 791, 859, 1000
Hpy8I	GTNNAC	4 cut(s)	66, 139, 620, 914
Hpy99I	CGWCG	1 cut(s)	70
HpyAV	CCTTC	2 cut(s)	4, 474
HpyCH4III	ACNGT	3 cut(s)	296, 669, 869
HpyCH4IV	ACGT	2 cut(s)	407, 616
HpyCH4V	TGCA	7 cut(s)	158, 255, 609, 679, 740, 938, 974
HpyF10VI	GCNNNNNNNGC	5 cut(s)	544, 611, 722, 734, 1018
HpyF3I	CTNAG	5 cut(s)	57, 75, 206, 432, 1017
HpySE526I	ACGT	2 cut(s)	407, 616
Hsp92II	CATG	3 cut(s)	928, 1003, 1027
HspAI	GCGC	2 cut(s)	203, 323
Kpn2I	TCCGGA	1 cut(s)	858
Ksp22I	TGATCA	1 cut(s)	631
KspI	CCGCGG	1 cut(s)	42
Kzo9I	GATC	3 cut(s)	103, 631, 748
Lsp1109I	GCAGC	4 cut(s)	556, 724, 752, 922
LweI	GCATC	1 cut(s)	883
MabI	ACCWGGT	1 cut(s)	694
MaeI	CTAG	1 cut(s)	107
MaeII	ACGT	2 cut(s)	407, 616
MaeIII	GTNAC	3 cut(s)	164, 399, 408
MalI	GATC	3 cut(s)	105, 633, 750
MboI	GATC	3 cut(s)	103, 631, 748
MfeI	CAATTG	2 cut(s)	732, 969
MflI	RGATCY	2 cut(s)	103, 748
MhlI	GDGCHC	5 cut(s)	273, 421, 851, 1023, 1065
MluCI	AATT	9 cut(s)	256, 479, 674, 732, 840, 969, 988, 1066, 1086
MluI	ACGCGT	1 cut(s)	126
MlyI	GAGTC	2 cut(s)	44, 71
MmeI	TCCRAC	3 cut(s)	120, 851, 1062
MroI	TCCGGA	1 cut(s)	858
MseI	TTAA	4 cut(s)	180, 660, 1071, 1132
MslI	CAYNNNNRTG	2 cut(s)	395, 923
MspA1I	CMGCKG	4 cut(s)	41, 56, 134, 743
MspI	CCGG	2 cut(s)	369, 859
MspR9I	CCNGG	1 cut(s)	696
MunI	CAATTG	2 cut(s)	732, 969
Mva1269I	GAATGC	1 cut(s)	110
MvaI	CCWGG	1 cut(s)	696
MvnI	CGCG	3 cut(s)	41, 128, 538
MwoI	GCNNNNNNNGC	5 cut(s)	544, 611, 722, 734, 1018
NdeII	GATC	3 cut(s)	103, 631, 748
NlaIII	CATG	3 cut(s)	928, 1003, 1027
NlaIV	GGNNCC	3 cut(s)	831, 848, 930
NmuCI	GTSAC	1 cut(s)	164
PagI	TCATGA	1 cut(s)	999
PctI	GAATGC	1 cut(s)	110
PkrI	GCNGC	5 cut(s)	546, 727, 739, 742, 937
PleI	GAGTC	2 cut(s)	43, 70
PpsI	GAGTC	2 cut(s)	43, 70
Ppu21I	YACGTR	1 cut(s)	617
PshBI	ATTAAT	1 cut(s)	660
PsiI	TTATAA	1 cut(s)	1091
Psp6I	CCWGG	1 cut(s)	694
PspGI	CCWGG	1 cut(s)	694
PspN4I	GGNNCC	3 cut(s)	831, 848, 930
PspPI	GGNCC	3 cut(s)	669, 830, 929
PstI	CTGCAG	1 cut(s)	742
PsuI	RGATCY	2 cut(s)	103, 748
PvuII	CAGCTG	1 cut(s)	56
RsaI	GTAC	2 cut(s)	343, 648
RsaNI	GTAC	2 cut(s)	342, 647
RseI	CAYNNNNRTG	2 cut(s)	395, 923
SacII	CCGCGG	1 cut(s)	42
SalI	GTCGAC	2 cut(s)	64, 912
SaqAI	TTAA	4 cut(s)	180, 660, 1071, 1132
SatI	GCNGC	5 cut(s)	545, 726, 738, 741, 936
Sau3AI	GATC	3 cut(s)	103, 631, 748
Sau96I	GGNCC	3 cut(s)	669, 830, 929
ScaI	AGTACT	1 cut(s)	648
SchI	GAGTC	2 cut(s)	44, 71
ScrFI	CCNGG	1 cut(s)	696
SduI	GDGCHC	5 cut(s)	273, 421, 851, 1023, 1065
SexAI	ACCWGGT	1 cut(s)	694
SfaNI	GCATC	1 cut(s)	883
SfcI	CTRYAG	1 cut(s)	738
Sfr303I	CCGCGG	1 cut(s)	42
SgrBI	CCGCGG	1 cut(s)	42
SinI	GGWCC	1 cut(s)	669
SmiMI	CAYNNNNRTG	2 cut(s)	395, 923
SmlI	CTYRAG	1 cut(s)	791
SmoI	CTYRAG	1 cut(s)	791
Sse9I	AATT	9 cut(s)	256, 479, 674, 732, 840, 969, 988, 1066, 1086
SsiI	CCGC	9 cut(s)	5, 39, 41, 132, 354, 448, 626, 726, 743
SspMI	CTAG	1 cut(s)	107
StyD4I	CCNGG	1 cut(s)	694
StyI	CCWWGG	1 cut(s)	300
TaaI	ACNGT	3 cut(s)	296, 669, 869
TaiI	ACGT	2 cut(s)	410, 619
TaqI	TCGA	2 cut(s)	65, 913
TasI	AATT	9 cut(s)	256, 479, 674, 732, 840, 969, 988, 1066, 1086
TatI	WGTACW	1 cut(s)	646
TauI	GCSGC	1 cut(s)	728
Tru1I	TTAA	4 cut(s)	180, 660, 1071, 1132
Tru9I	TTAA	4 cut(s)	180, 660, 1071, 1132
TseFI	GTSAC	1 cut(s)	164
TseI	GCWGC	4 cut(s)	544, 737, 740, 935
Tsp45I	GTSAC	1 cut(s)	164
TspDTI	ATGAA	5 cut(s)	491, 788, 913, 988, 1040
VpaK11BI	GGWCC	1 cut(s)	669
VspI	ATTAAT	1 cut(s)	660
XapI	RAATTY	1 cut(s)	988
XmiI	GTMKAC	2 cut(s)	65, 913
XspI	CTAG	1 cut(s)	107
ZrmI	AGTACT	1 cut(s)	648

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.