Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp06

Orthogroup ID

OG0029002

Physical Location & Seq

Genomic Coordinates Forward (+)

26938168 .. 26939594

Gene Structure 1427 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.6G292700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 354 bp

ATGGCTAGCTATGCATTGATTAAGCTTGCTGTGTTTGTGGCCTTGTGCATGGTGGTGAGTGTACCCATAGCCTATGCCATAACATGTGACCAAGTCTCCCACAACCTCGTTCCATGCCTAGACTACTTGAGGAATTGCGGTGCTGTCCCTGAACCTTGTTGCAGAGGAATTAGCAACCTCAATGACTTGGGAAGAACCACCGCTGAGCGCCGGACCATTTGCAATTGTCTGAAACAAAATGCTCCTAGCTTGACCGGAGTTAATCCAACCTTGGCAGAAGAGCTTCCCGCCAAGTGTGGAGTCAATGTTCCTTACAAGATTAGCCCCAACCCAAACTGCGCAAACGTGCAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0005215 GO:0005319 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005576 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0005886 GO:0005911 GO:0006649 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006950 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009505 GO:0009506 GO:0009507 GO:0009534 GO:0009536 GO:0009579 GO:0009628 GO:0009889 GO:0009987 GO:0010035 GO:0010556 GO:0010876 GO:0012505 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0019222 GO:0030054 GO:0030154 GO:0030312 GO:0031410 GO:0031976 GO:0031982 GO:0031984 GO:0032501 GO:0032502 GO:0033036 GO:0042221 GO:0042335 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048046 GO:0048856 GO:0048869 GO:0050789 GO:0050896 GO:0051179 GO:0051234 GO:0055044 GO:0060255 GO:0061024 GO:0065007 GO:0071702 GO:0071840 GO:0071944 GO:0090627 GO:0097708 GO:0098791 GO:1901700 GO:1901957

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Tryp_alpha_amyl

Protein Analysis

118

Amino Acids

12.51

Weight (kDa)

8.05

Isoelectric Point (pI)

48.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0029002)

Species	Orthologous Gene IDs
prunus_persica	Prupe.5G155000_v2.0.a1 Prupe.6G292700_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	340
AciI	CCGC	3 cut(s)	138, 201, 288
AfaI	GTAC	1 cut(s)	63
AflIII	ACRYGT	1 cut(s)	83
AloI	GAACNNNNNNTCC	2 cut(s)	291, 323
AluBI	AGCT	4 cut(s)	9, 25, 249, 283
AluI	AGCT	4 cut(s)	9, 25, 249, 283
Alw26I	GTCTC	1 cut(s)	100
AoxI	GGCC	1 cut(s)	39
Asp700I	GAANNNNTTC	1 cut(s)	282
AspLEI	GCGC	2 cut(s)	210, 341
AspS9I	GGNCC	1 cut(s)	213
AsuHPI	GGTGA	1 cut(s)	67
AsuNHI	GCTAGC	1 cut(s)	5
AvaII	GGWCC	1 cut(s)	213
BcoDI	GTCTC	1 cut(s)	100
BfaI	CTAG	3 cut(s)	6, 119, 246
BfoI	RGCGCY	1 cut(s)	211
BlpI	GCTNAGC	1 cut(s)	204
Bme18I	GGWCC	1 cut(s)	213
BmgT120I	GGNCC	1 cut(s)	213
BmtI	GCTAGC	1 cut(s)	9
Bpu1102I	GCTNAGC	1 cut(s)	204
BpuEI	CTTGAG	1 cut(s)	148
BsaJI	CCNNGG	1 cut(s)	270
BsaWI	WCCGGW	1 cut(s)	254
BsaXI	ACNNNNNCTCC	4 cut(s)	80, 110, 291, 321
BseDI	CCNNGG	1 cut(s)	270
BseMII	CTCAG	1 cut(s)	195
BshFI	GGCC	1 cut(s)	41
BsiSI	CCGG	2 cut(s)	211, 255
BslFI	GGGAC	1 cut(s)	131
BsmAI	GTCTC	1 cut(s)	100
BsmFI	GGGAC	1 cut(s)	131
BsnI	GGCC	1 cut(s)	41
Bsp1720I	GCTNAGC	1 cut(s)	204
BspACI	CCGC	3 cut(s)	138, 201, 288
BspANI	GGCC	1 cut(s)	41
BspCNI	CTCAG	1 cut(s)	196
BspOI	GCTAGC	1 cut(s)	9
BspQI	GCTCTTC	1 cut(s)	273
BssECI	CCNNGG	1 cut(s)	270
BssT1I	CCWWGG	1 cut(s)	270
Bst6I	CTCTTC	1 cut(s)	273
BstC8I	GCNNGC	2 cut(s)	7, 27
BstDEI	CTNAG	1 cut(s)	204
BstH2I	RGCGCY	1 cut(s)	211
BstHHI	GCGC	2 cut(s)	210, 341
BstMAI	GTCTC	1 cut(s)	100
BstMWI	GCNNNNNNNGC	1 cut(s)	11
BstNSI	RCATGY	1 cut(s)	87
BsuRI	GGCC	1 cut(s)	41
Cac8I	GCNNGC	2 cut(s)	7, 27
CfoI	GCGC	2 cut(s)	210, 341
Cfr13I	GGNCC	1 cut(s)	213
Csp6I	GTAC	1 cut(s)	62
CviAII	CATG	3 cut(s)	49, 84, 114
CviJI	RGCY	8 cut(s)	5, 9, 25, 41, 71, 249, 283, 324
CviKI_1	RGCY	8 cut(s)	5, 9, 25, 41, 71, 249, 283, 324
CviQI	GTAC	1 cut(s)	62
DdeI	CTNAG	1 cut(s)	204
Eam1104I	CTCTTC	1 cut(s)	273
EarI	CTCTTC	1 cut(s)	273
Eco130I	CCWWGG	1 cut(s)	270
Eco47I	GGWCC	1 cut(s)	213
EcoT14I	CCWWGG	1 cut(s)	270
EcoT22I	ATGCAT	1 cut(s)	16
ErhI	CCWWGG	1 cut(s)	270
FaeI	CATG	3 cut(s)	52, 87, 117
FaiI	YATR	7 cut(s)	12, 50, 68, 75, 80, 85, 115
FaqI	GGGAC	1 cut(s)	131
FatI	CATG	3 cut(s)	48, 83, 113
FauI	CCCGC	1 cut(s)	295
FspBI	CTAG	3 cut(s)	6, 119, 246
FspI	TGCGCA	1 cut(s)	340
GlaI	GCGC	2 cut(s)	209, 340
HaeII	RGCGCY	1 cut(s)	211
HaeIII	GGCC	1 cut(s)	41
HapII	CCGG	2 cut(s)	211, 255
HhaI	GCGC	2 cut(s)	210, 341
Hin1II	CATG	3 cut(s)	52, 87, 117
Hin6I	GCGC	2 cut(s)	208, 339
HinP1I	GCGC	2 cut(s)	208, 339
HindIII	AAGCTT	1 cut(s)	23
HinfI	GANTC	1 cut(s)	300
HpaII	CCGG	2 cut(s)	211, 255
HphI	GGTGA	1 cut(s)	67
Hpy166II	GTNNAC	1 cut(s)	62
Hpy188I	TCNGA	1 cut(s)	231
Hpy8I	GTNNAC	1 cut(s)	62
HpyCH4IV	ACGT	1 cut(s)	345
HpyCH4V	TGCA	5 cut(s)	14, 48, 162, 222, 349
HpyF10VI	GCNNNNNNNGC	1 cut(s)	11
HpyF3I	CTNAG	1 cut(s)	204
HpySE526I	ACGT	1 cut(s)	345
Hsp92II	CATG	3 cut(s)	52, 87, 117
HspAI	GCGC	2 cut(s)	208, 339
LguI	GCTCTTC	1 cut(s)	273
LmnI	GCTCC	1 cut(s)	247
LpnPI	CCDG	3 cut(s)	162, 224, 268
MaeI	CTAG	3 cut(s)	6, 119, 246
MaeII	ACGT	1 cut(s)	345
MaeIII	GTNAC	1 cut(s)	86
MboII	GAAGA	2 cut(s)	204, 290
MfeI	CAATTG	1 cut(s)	223
MluCI	AATT	3 cut(s)	133, 168, 223
MlyI	GAGTC	1 cut(s)	309
MmeI	TCCRAC	1 cut(s)	290
MnlI	CCTC	4 cut(s)	116, 123, 158, 188
Mph1103I	ATGCAT	1 cut(s)	16
MroXI	GAANNNNTTC	1 cut(s)	282
MseI	TTAA	2 cut(s)	21, 261
MslI	CAYNNNNRTG	1 cut(s)	53
MspA1I	CMGCKG	1 cut(s)	203
MspI	CCGG	2 cut(s)	211, 255
MunI	CAATTG	1 cut(s)	223
MwoI	GCNNNNNNNGC	1 cut(s)	11
NheI	GCTAGC	1 cut(s)	5
NlaIII	CATG	3 cut(s)	52, 87, 117
NmuCI	GTSAC	1 cut(s)	86
NsbI	TGCGCA	1 cut(s)	340
NsiI	ATGCAT	1 cut(s)	16
NspI	RCATGY	1 cut(s)	87
PciI	ACATGT	1 cut(s)	83
PciSI	GCTCTTC	1 cut(s)	273
PdmI	GAANNNNTTC	1 cut(s)	282
PflFI	GACNNNGTC	1 cut(s)	92
PleI	GAGTC	1 cut(s)	308
PpsI	GAGTC	1 cut(s)	308
PscI	ACATGT	1 cut(s)	83
PspPI	GGNCC	1 cut(s)	213
PsyI	GACNNNGTC	1 cut(s)	92
RsaI	GTAC	1 cut(s)	63
RsaNI	GTAC	1 cut(s)	62
RseI	CAYNNNNRTG	1 cut(s)	53
SapI	GCTCTTC	1 cut(s)	273
SaqAI	TTAA	2 cut(s)	21, 261
Sau96I	GGNCC	1 cut(s)	213
SchI	GAGTC	1 cut(s)	309
SetI	ASST	9 cut(s)	11, 27, 108, 157, 180, 251, 272, 285, 348
SinI	GGWCC	1 cut(s)	213
SmiMI	CAYNNNNRTG	1 cut(s)	53
SmlI	CTYRAG	1 cut(s)	127
SmoI	CTYRAG	1 cut(s)	127
Sse9I	AATT	3 cut(s)	133, 168, 223
SsiI	CCGC	3 cut(s)	138, 201, 288
SspMI	CTAG	3 cut(s)	6, 119, 246
StyI	CCWWGG	1 cut(s)	270
TaiI	ACGT	1 cut(s)	348
TasI	AATT	3 cut(s)	133, 168, 223
Tru1I	TTAA	2 cut(s)	21, 261
Tru9I	TTAA	2 cut(s)	21, 261
TseFI	GTSAC	1 cut(s)	86
Tsp45I	GTSAC	1 cut(s)	86
Tth111I	GACNNNGTC	1 cut(s)	92
VpaK11BI	GGWCC	1 cut(s)	213
XceI	RCATGY	1 cut(s)	87
XmnI	GAANNNNTTC	1 cut(s)	282
XspI	CTAG	3 cut(s)	6, 119, 246
Zsp2I	ATGCAT	1 cut(s)	16

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.