Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0029052

Physical Location & Seq

Genomic Coordinates Forward (+)

634631 .. 635023

Gene Structure 393 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G005600.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 393 bp

ATGCGTCCTCAACCTCAGTGGCTCCTCTTGGCACTAATTGGCCTTCTCCTTCCTCTGATGCTGGTGGCTGCTGTTACTTCGCCGCGGCCTCTTGCCGGCGGTTGGAAGCCCATAGCCAAAGAGAACATCAGCGACCCTCGTCTGAAGTTGATGGCAGACTTCGCGGTGTCCATGTACAACTTGCGAACCCATAAGAAGTTGTTCGTTGTGAGAGTCGTCCGCGGCGACACTCAGATCGTGGCGGGCCAGAACTATCGGCTTGTCGTTTTGGCCAAGGATGGACTATCGTTGCCTAACTCCACCGCAGATCATGCCCATTATGAGCTTCGTGTCTATGAGAAGCTTTGGGAGGATCTTTGGAAATTGGTCTCTTTTCGTCAACTCGAAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002020 GO:0003674 GO:0004857 GO:0004866 GO:0004869 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005623 GO:0006950 GO:0008150 GO:0009266 GO:0009408 GO:0009628 GO:0009892 GO:0009987 GO:0010029 GO:0010030 GO:0010466 GO:0010605 GO:0010951 GO:0019222 GO:0019899 GO:0030162 GO:0030234 GO:0030312 GO:0030414 GO:0031323 GO:0031324 GO:0032268 GO:0032269 GO:0033554 GO:0034605 GO:0043086 GO:0044092 GO:0044464 GO:0045861 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050896 GO:0051094 GO:0051171 GO:0051172 GO:0051239 GO:0051240 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0051716 GO:0052547 GO:0052548 GO:0060255 GO:0061134 GO:0061135 GO:0065007 GO:0065009 GO:0071944 GO:0080090 GO:0098772 GO:1900140 GO:2000026 GO:2000116 GO:2000117

KEGG Pathways

Metabolic & Signaling

ko04970 map04970

Pfam Domains

Protein Families

SQAPI

Protein Analysis

131

Amino Acids

14.84

Weight (kDa)

9.84

Isoelectric Point (pI)

32.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0029052)

Species	Orthologous Gene IDs
prunus_persica	Prupe.4G009200_v2.0.a1 Prupe.7G005600_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	3 cut(s)	85, 164, 222
AciI	CCGC	8 cut(s)	83, 85, 99, 164, 220, 222, 242, 303
AclWI	GGATC	1 cut(s)	360
AcoI	YGGCCR	1 cut(s)	270
AcuI	CTGAAG	1 cut(s)	164
AfaI	GTAC	1 cut(s)	176
AfiI	CCNNNNNNNGG	2 cut(s)	95, 102
AluBI	AGCT	2 cut(s)	325, 343
AluI	AGCT	2 cut(s)	325, 343
Alw26I	GTCTC	1 cut(s)	373
AlwI	GGATC	1 cut(s)	360
AoxI	GGCC	4 cut(s)	40, 86, 244, 270
ApeKI	GCWGC	1 cut(s)	68
Asp700I	GAANNNNTTC	1 cut(s)	200
AspS9I	GGNCC	1 cut(s)	244
BalI	TGGCCA	1 cut(s)	272
BbvI	GCAGC	1 cut(s)	55
BccI	CCATC	2 cut(s)	145, 272
BcoDI	GTCTC	1 cut(s)	373
BisI	GCNGC	4 cut(s)	69, 83, 86, 223
BlsI	GCNGC	4 cut(s)	70, 84, 87, 224
BmgT120I	GGNCC	1 cut(s)	244
BmiI	GGNNCC	1 cut(s)	23
BmsI	GCATC	1 cut(s)	48
BoxI	GACNNNNGTC	1 cut(s)	138
BsaI	GGTCTC	1 cut(s)	373
BsaJI	CCNNGG	3 cut(s)	83, 220, 273
Bsc4I	CCNNNNNNNGG	2 cut(s)	95, 102
Bse118I	RCCGGY	1 cut(s)	95
BseDI	CCNNGG	3 cut(s)	83, 220, 273
BseGI	GGATG	1 cut(s)	283
BseLI	CCNNNNNNNGG	2 cut(s)	95, 102
BseMII	CTCAG	2 cut(s)	29, 245
BseRI	GAGGAG	1 cut(s)	14
BseXI	GCAGC	1 cut(s)	55
Bsh1236I	CGCG	3 cut(s)	85, 164, 222
BshFI	GGCC	4 cut(s)	42, 88, 246, 272
BsiSI	CCGG	1 cut(s)	96
BslI	CCNNNNNNNGG	2 cut(s)	95, 102
BsmAI	GTCTC	1 cut(s)	373
BsnI	GGCC	4 cut(s)	42, 88, 246, 272
Bso31I	GGTCTC	1 cut(s)	373
Bsp1407I	TGTACA	1 cut(s)	174
Bsp143I	GATC	3 cut(s)	234, 307, 352
BspACI	CCGC	8 cut(s)	83, 85, 99, 164, 220, 222, 242, 303
BspANI	GGCC	4 cut(s)	42, 88, 246, 272
BspCNI	CTCAG	2 cut(s)	28, 244
BspFNI	CGCG	3 cut(s)	85, 164, 222
BspLI	GGNNCC	1 cut(s)	23
BspPI	GGATC	1 cut(s)	360
BspTNI	GGTCTC	1 cut(s)	373
BsrFI	RCCGGY	1 cut(s)	95
BsrGI	TGTACA	1 cut(s)	174
BssAI	RCCGGY	1 cut(s)	95
BssECI	CCNNGG	3 cut(s)	83, 220, 273
BssMI	GATC	3 cut(s)	234, 307, 352
BssT1I	CCWWGG	1 cut(s)	273
BstAPI	GCANNNNNTGC	1 cut(s)	311
BstAUI	TGTACA	1 cut(s)	174
BstC8I	GCNNGC	2 cut(s)	97, 244
BstDEI	CTNAG	2 cut(s)	15, 231
BstDSI	CCRYGG	2 cut(s)	83, 220
BstF5I	GGATG	1 cut(s)	283
BstFNI	CGCG	3 cut(s)	85, 164, 222
BstKTI	GATC	3 cut(s)	237, 310, 355
BstMAI	GTCTC	1 cut(s)	373
BstMBI	GATC	3 cut(s)	234, 307, 352
BstMWI	GCNNNNNNNGC	2 cut(s)	161, 311
BstPAI	GACNNNNGTC	1 cut(s)	138
BstUI	CGCG	3 cut(s)	85, 164, 222
BstV1I	GCAGC	1 cut(s)	55
BstX2I	RGATCY	1 cut(s)	352
BstYI	RGATCY	1 cut(s)	352
BsuRI	GGCC	4 cut(s)	42, 88, 246, 272
BtgI	CCRYGG	2 cut(s)	83, 220
BtsCI	GGATG	1 cut(s)	283
BtsIMutI	CAGTG	1 cut(s)	23
Cac8I	GCNNGC	2 cut(s)	97, 244
Cfr10I	RCCGGY	1 cut(s)	95
Cfr13I	GGNCC	1 cut(s)	244
Cfr42I	CCGCGG	2 cut(s)	86, 223
Csp6I	GTAC	1 cut(s)	175
CspCI	CAANNNNNGTGG	1 cut(s)	34
CviAII	CATG	2 cut(s)	172, 311
CviQI	GTAC	1 cut(s)	175
DdeI	CTNAG	2 cut(s)	15, 231
DpnI	GATC	3 cut(s)	236, 309, 354
DpnII	GATC	3 cut(s)	234, 307, 352
EaeI	YGGCCR	1 cut(s)	270
Eco130I	CCWWGG	1 cut(s)	273
Eco31I	GGTCTC	1 cut(s)	373
Eco57I	CTGAAG	1 cut(s)	164
EcoT14I	CCWWGG	1 cut(s)	273
ErhI	CCWWGG	1 cut(s)	273
FaeI	CATG	2 cut(s)	175, 314
FaiI	YATR	6 cut(s)	113, 173, 192, 312, 321, 336
FatI	CATG	2 cut(s)	171, 310
FauI	CCCGC	1 cut(s)	235
Fnu4HI	GCNGC	4 cut(s)	69, 83, 86, 223
FokI	GGATG	1 cut(s)	290
Fsp4HI	GCNGC	4 cut(s)	69, 83, 86, 223
GluI	GCNGC	4 cut(s)	69, 83, 86, 223
HaeIII	GGCC	4 cut(s)	42, 88, 246, 272
HapII	CCGG	1 cut(s)	96
Hin1II	CATG	2 cut(s)	175, 314
HincII	GTYRAC	1 cut(s)	380
HindII	GTYRAC	1 cut(s)	380
HindIII	AAGCTT	1 cut(s)	341
HinfI	GANTC	1 cut(s)	213
HpaII	CCGG	1 cut(s)	96
Hpy166II	GTNNAC	1 cut(s)	380
Hpy188I	TCNGA	3 cut(s)	57, 144, 234
Hpy8I	GTNNAC	1 cut(s)	380
HpyAV	CCTTC	2 cut(s)	53, 59
HpyF10VI	GCNNNNNNNGC	2 cut(s)	161, 311
HpyF3I	CTNAG	2 cut(s)	15, 231
Hsp92II	CATG	2 cut(s)	175, 314
KroI	GCCGGC	1 cut(s)	95
KroNI	GCCGGC	1 cut(s)	97
KspI	CCGCGG	2 cut(s)	86, 223
Kzo9I	GATC	3 cut(s)	234, 307, 352
LmnI	GCTCC	1 cut(s)	27
LpnPI	CCDG	3 cut(s)	47, 109, 260
Lsp1109I	GCAGC	1 cut(s)	55
LweI	GCATC	1 cut(s)	48
MaeIII	GTNAC	1 cut(s)	73
MalI	GATC	3 cut(s)	236, 309, 354
MboI	GATC	3 cut(s)	234, 307, 352
MflI	RGATCY	1 cut(s)	352
MlsI	TGGCCA	1 cut(s)	272
MluCI	AATT	3 cut(s)	36, 362, 388
MluNI	TGGCCA	1 cut(s)	272
MlyI	GAGTC	1 cut(s)	222
MmeI	TCCRAC	1 cut(s)	83
MnlI	CCTC	7 cut(s)	18, 24, 35, 63, 99, 147, 343
Mox20I	TGGCCA	1 cut(s)	272
MroNI	GCCGGC	1 cut(s)	95
MroXI	GAANNNNTTC	1 cut(s)	200
MscI	TGGCCA	1 cut(s)	272
MseI	TTAA	1 cut(s)	391
Msp20I	TGGCCA	1 cut(s)	272
MspA1I	CMGCKG	2 cut(s)	85, 222
MspI	CCGG	1 cut(s)	96
MvnI	CGCG	3 cut(s)	85, 164, 222
MwoI	GCNNNNNNNGC	2 cut(s)	161, 311
NaeI	GCCGGC	1 cut(s)	97
NdeII	GATC	3 cut(s)	234, 307, 352
NgoMIV	GCCGGC	1 cut(s)	95
NlaIII	CATG	2 cut(s)	175, 314
NlaIV	GGNNCC	1 cut(s)	23
PcsI	WCGNNNNNNNCGW	1 cut(s)	222
PdiI	GCCGGC	1 cut(s)	97
PdmI	GAANNNNTTC	1 cut(s)	200
PkrI	GCNGC	4 cut(s)	70, 84, 87, 224
PleI	GAGTC	1 cut(s)	221
PpsI	GAGTC	1 cut(s)	221
PshAI	GACNNNNGTC	1 cut(s)	138
PspN4I	GGNNCC	1 cut(s)	23
PspPI	GGNCC	1 cut(s)	244
PsuI	RGATCY	1 cut(s)	352
RsaI	GTAC	1 cut(s)	176
RsaNI	GTAC	1 cut(s)	175
SacII	CCGCGG	2 cut(s)	86, 223
SaqAI	TTAA	1 cut(s)	391
SatI	GCNGC	4 cut(s)	69, 83, 86, 223
Sau3AI	GATC	3 cut(s)	234, 307, 352
Sau96I	GGNCC	1 cut(s)	244
SchI	GAGTC	1 cut(s)	222
SetI	ASST	3 cut(s)	16, 327, 345
SfaNI	GCATC	1 cut(s)	48
Sfr303I	CCGCGG	2 cut(s)	86, 223
SgrBI	CCGCGG	2 cut(s)	86, 223
Sse9I	AATT	3 cut(s)	36, 362, 388
SsiI	CCGC	8 cut(s)	83, 85, 99, 164, 220, 222, 242, 303
StyI	CCWWGG	1 cut(s)	273
TaqI	TCGA	1 cut(s)	384
TasI	AATT	3 cut(s)	36, 362, 388
TatI	WGTACW	1 cut(s)	174
TauI	GCSGC	3 cut(s)	85, 88, 225
Tru1I	TTAA	1 cut(s)	391
Tru9I	TTAA	1 cut(s)	391
TscAI	CASTG	1 cut(s)	23
TseI	GCWGC	1 cut(s)	68
TspRI	CASTG	1 cut(s)	23
XmnI	GAANNNNTTC	1 cut(s)	200

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.