Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0021243

Physical Location & Seq

Genomic Coordinates Forward (+)

5049275 .. 5054941

Gene Structure 5667 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G027000.1_v2.0.a1.CDS.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 564 bp

ATGACAGACCATGGGCCACGCTCCAAGATCTTCCTTGCCATATCCTCATCCTGGACAGAGATGGCAAACAGGTTTTCACGTATCCAGGGTGAGCTAGCTCTAGCATTTGGTGAGTTACTTGGGAAGCTATGGGCGCCTGGACGAACACCGGTTGCTCCTCGACCTTTTAAAACAAAACTTGCTCGTTTTGCACCTCAGTTTAGTGGTCACAATCAGCACGATTCTCAGGAGCTTTTGGCATTTTTGCTAGATGGTCTTCATGAAGATCTGAATCGTGTGAAACACAAACCATATGTAAATTTTAGAGATGCTGATGTCCGGCCTGATGAAGACGTAGCTGATGAGTATTTGGCAAACCACATTGCTCGTAATGATTCTATAATTGTTGATGTCTGCCAAGTGGCGGACAATTTCTATAGACCCAATTTGAAGAAAGCAGCTCTTGCCAGGGTGAATGTTGGTCACAGGAGTCTCAAGGTCTCCAAGTTTGGTGTCAAGAAGAGGAATAGGCAGGTTGTCAAGACCCCTGATCACAGAATCATTGAAAAGATGTGGCATCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009987 GO:0019538 GO:0019941 GO:0030163 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0051603 GO:0071704 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

DUSP UCH USP7_C2

Protein Analysis

188

Amino Acids

21.4

Weight (kDa)

9.85

Isoelectric Point (pI)

35.04

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0021243)

Species	Orthologous Gene IDs
prunus_persica	Prupe.7G027000_v2.0.a1 Prupe.7G027000_v2.0.a1 Prupe.7G027000_v2.0.a1 Prupe.7G027000_v2.0.a1
rosa_multiflora	Rmu_co8088232.1_g000001

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	502
AccB1I	GGYRCC	1 cut(s)	133
AciI	CCGC	1 cut(s)	404
AcsI	RAATTY	1 cut(s)	298
AcyI	GRCGYC	1 cut(s)	134
AfiI	CCNNNNNNNGG	2 cut(s)	51, 403
AgeI	ACCGGT	1 cut(s)	148
AgsI	TTSAA	2 cut(s)	430, 545
AjnI	CCWGG	4 cut(s)	50, 84, 136, 446
AluBI	AGCT	6 cut(s)	94, 98, 127, 232, 338, 440
AluI	AGCT	6 cut(s)	94, 98, 127, 232, 338, 440
Alw26I	GTCTC	2 cut(s)	476, 484
AoxI	GGCC	2 cut(s)	14, 320
ApeKI	GCWGC	1 cut(s)	437
ApoI	RAATTY	1 cut(s)	298
AsiGI	ACCGGT	1 cut(s)	148
AspLEI	GCGC	1 cut(s)	136
AspS9I	GGNCC	1 cut(s)	14
AsuHPI	GGTGA	3 cut(s)	101, 122, 463
AsuNHI	GCTAGC	1 cut(s)	94
BanI	GGYRCC	1 cut(s)	133
BbsI	GAAGAC	2 cut(s)	248, 336
BbvI	GCAGC	1 cut(s)	449
BccI	CCATC	2 cut(s)	55, 245
BciT130I	CCWGG	4 cut(s)	52, 86, 138, 448
BciVI	GTATCC	1 cut(s)	92
BclI	TGATCA	1 cut(s)	529
BcoDI	GTCTC	2 cut(s)	476, 484
BfaI	CTAG	3 cut(s)	95, 101, 248
BfmI	CTRYAG	1 cut(s)	415
BfoI	RGCGCY	1 cut(s)	137
BfuAI	ACCTGC	1 cut(s)	502
BfuI	GTATCC	1 cut(s)	92
BglII	AGATCT	2 cut(s)	27, 265
BisI	GCNGC	1 cut(s)	438
BlsI	GCNGC	1 cut(s)	439
Bme1390I	CCNGG	4 cut(s)	52, 86, 138, 448
BmgT120I	GGNCC	1 cut(s)	14
BmiI	GGNNCC	1 cut(s)	135
BmrFI	CCNGG	4 cut(s)	52, 86, 138, 448
BmsI	GCATC	1 cut(s)	298
BmtI	GCTAGC	1 cut(s)	98
BpiI	GAAGAC	2 cut(s)	248, 336
BpuEI	CTTGAG	1 cut(s)	458
BsaAI	YACGTR	1 cut(s)	80
BsaBI	GATNNNNATC	1 cut(s)	270
BsaHI	GRCGYC	1 cut(s)	134
BsaI	GGTCTC	1 cut(s)	484
BsaJI	CCNNGG	3 cut(s)	10, 85, 447
BsaWI	WCCGGW	1 cut(s)	148
Bsc4I	CCNNNNNNNGG	2 cut(s)	51, 403
Bse118I	RCCGGY	1 cut(s)	148
Bse3DI	GCAATG	1 cut(s)	360
Bse8I	GATNNNNATC	1 cut(s)	270
BseBI	CCWGG	4 cut(s)	52, 86, 138, 448
BseDI	CCNNGG	3 cut(s)	10, 85, 447
BseGI	GGATG	1 cut(s)	47
BseJI	GATNNNNATC	1 cut(s)	270
BseLI	CCNNNNNNNGG	2 cut(s)	51, 403
BseMI	GCAATG	1 cut(s)	360
BseMII	CTCAG	2 cut(s)	209, 239
BseRI	GAGGAG	1 cut(s)	147
BseXI	GCAGC	1 cut(s)	449
BshFI	GGCC	2 cut(s)	16, 322
BshNI	GGYRCC	1 cut(s)	133
BshTI	ACCGGT	1 cut(s)	148
BsiSI	CCGG	2 cut(s)	149, 319
BslI	CCNNNNNNNGG	2 cut(s)	51, 403
BsmAI	GTCTC	2 cut(s)	476, 484
BsnI	GGCC	2 cut(s)	16, 322
Bso31I	GGTCTC	1 cut(s)	484
Bsp143I	GATC	3 cut(s)	27, 265, 529
Bsp19I	CCATGG	1 cut(s)	10
BspACI	CCGC	1 cut(s)	404
BspANI	GGCC	2 cut(s)	16, 322
BspCNI	CTCAG	2 cut(s)	208, 238
BspHI	TCATGA	1 cut(s)	259
BspLI	GGNNCC	1 cut(s)	135
BspMI	ACCTGC	1 cut(s)	502
BspOI	GCTAGC	1 cut(s)	98
BspT107I	GGYRCC	1 cut(s)	133
BspTNI	GGTCTC	1 cut(s)	484
BsrDI	GCAATG	1 cut(s)	360
BsrFI	RCCGGY	1 cut(s)	148
BssAI	RCCGGY	1 cut(s)	148
BssECI	CCNNGG	3 cut(s)	10, 85, 447
BssMI	GATC	3 cut(s)	27, 265, 529
BssNI	GRCGYC	1 cut(s)	134
BssT1I	CCWWGG	1 cut(s)	10
Bst2UI	CCWGG	4 cut(s)	52, 86, 138, 448
Bst6I	CTCTTC	1 cut(s)	494
BstACI	GRCGYC	1 cut(s)	134
BstAPI	GCANNNNNTGC	1 cut(s)	443
BstBAI	YACGTR	1 cut(s)	80
BstC8I	GCNNGC	1 cut(s)	96
BstDEI	CTNAG	2 cut(s)	195, 225
BstDSI	CCRYGG	1 cut(s)	10
BstF5I	GGATG	1 cut(s)	47
BstH2I	RGCGCY	1 cut(s)	137
BstHHI	GCGC	1 cut(s)	136
BstKTI	GATC	3 cut(s)	30, 268, 532
BstMAI	GTCTC	2 cut(s)	476, 484
BstMBI	GATC	3 cut(s)	27, 265, 529
BstMWI	GCNNNNNNNGC	3 cut(s)	133, 188, 443
BstNI	CCWGG	4 cut(s)	52, 86, 138, 448
BstSCI	CCNGG	4 cut(s)	50, 84, 136, 446
BstSFI	CTRYAG	1 cut(s)	415
BstV1I	GCAGC	1 cut(s)	449
BstV2I	GAAGAC	2 cut(s)	248, 336
BstX2I	RGATCY	2 cut(s)	27, 265
BstYI	RGATCY	2 cut(s)	27, 265
BsuI	GTATCC	1 cut(s)	92
BsuRI	GGCC	2 cut(s)	16, 322
BtgI	CCRYGG	1 cut(s)	10
BtsCI	GGATG	1 cut(s)	47
BveI	ACCTGC	1 cut(s)	502
Cac8I	GCNNGC	1 cut(s)	96
CciI	TCATGA	1 cut(s)	259
CfoI	GCGC	1 cut(s)	136
Cfr10I	RCCGGY	1 cut(s)	148
Cfr13I	GGNCC	1 cut(s)	14
CspAI	ACCGGT	1 cut(s)	148
CviAII	CATG	2 cut(s)	11, 260
CviJI	RGCY	8 cut(s)	16, 94, 98, 127, 232, 322, 338, 440
CviKI_1	RGCY	8 cut(s)	16, 94, 98, 127, 232, 322, 338, 440
DdeI	CTNAG	2 cut(s)	195, 225
DinI	GGCGCC	1 cut(s)	135
DpnI	GATC	3 cut(s)	29, 267, 531
DpnII	GATC	3 cut(s)	27, 265, 529
DraI	TTTAAA	1 cut(s)	169
Eam1104I	CTCTTC	1 cut(s)	494
EarI	CTCTTC	1 cut(s)	494
EciI	GGCGGA	1 cut(s)	419
Eco130I	CCWWGG	1 cut(s)	10
Eco31I	GGTCTC	1 cut(s)	484
EcoRII	CCWGG	4 cut(s)	50, 84, 136, 446
EcoT14I	CCWWGG	1 cut(s)	10
EgeI	GGCGCC	1 cut(s)	135
EheI	GGCGCC	1 cut(s)	135
ErhI	CCWWGG	1 cut(s)	10
FaeI	CATG	2 cut(s)	14, 263
FaiI	YATR	8 cut(s)	12, 41, 130, 261, 292, 294, 380, 417
FalI	AAGNNNNNCTT	2 cut(s)	426, 458
FatI	CATG	2 cut(s)	10, 259
FauNDI	CATATG	1 cut(s)	292
FbaI	TGATCA	1 cut(s)	529
Fnu4HI	GCNGC	1 cut(s)	438
FokI	GGATG	1 cut(s)	34
Fsp4HI	GCNGC	1 cut(s)	438
FspBI	CTAG	3 cut(s)	95, 101, 248
GlaI	GCGC	1 cut(s)	135
GluI	GCNGC	1 cut(s)	438
HaeII	RGCGCY	1 cut(s)	137
HaeIII	GGCC	2 cut(s)	16, 322
HapII	CCGG	2 cut(s)	149, 319
HhaI	GCGC	1 cut(s)	136
Hin1I	GRCGYC	1 cut(s)	134
Hin1II	CATG	2 cut(s)	14, 263
Hin6I	GCGC	1 cut(s)	134
HinP1I	GCGC	1 cut(s)	134
HinfI	GANTC	5 cut(s)	221, 271, 374, 469, 537
HpaII	CCGG	2 cut(s)	149, 319
HphI	GGTGA	3 cut(s)	101, 122, 463
Hpy188I	TCNGA	2 cut(s)	270, 563
Hpy188III	TCNNGA	4 cut(s)	227, 260, 496, 520
HpyCH4IV	ACGT	2 cut(s)	79, 333
HpyCH4V	TGCA	1 cut(s)	191
HpyF10VI	GCNNNNNNNGC	3 cut(s)	133, 188, 443
HpyF3I	CTNAG	2 cut(s)	195, 225
HpySE526I	ACGT	2 cut(s)	79, 333
Hsp92I	GRCGYC	1 cut(s)	134
Hsp92II	CATG	2 cut(s)	14, 263
HspAI	GCGC	1 cut(s)	134
KasI	GGCGCC	1 cut(s)	133
Ksp22I	TGATCA	1 cut(s)	529
Kzo9I	GATC	3 cut(s)	27, 265, 529
LmnI	GCTCC	3 cut(s)	26, 160, 229
Lsp1109I	GCAGC	1 cut(s)	449
LweI	GCATC	1 cut(s)	298
MaeI	CTAG	3 cut(s)	95, 101, 248
MaeII	ACGT	2 cut(s)	79, 333
MaeIII	GTNAC	3 cut(s)	114, 206, 461
MalI	GATC	3 cut(s)	29, 267, 531
MboI	GATC	3 cut(s)	27, 265, 529
MboII	GAAGA	6 cut(s)	22, 248, 275, 341, 442, 511
MflI	RGATCY	2 cut(s)	27, 265
MluCI	AATT	4 cut(s)	298, 381, 409, 424
Mly113I	GGCGCC	1 cut(s)	134
MlyI	GAGTC	1 cut(s)	478
MnlI	CCTC	4 cut(s)	55, 168, 204, 495
MseI	TTAA	1 cut(s)	168
MspI	CCGG	2 cut(s)	149, 319
MspR9I	CCNGG	4 cut(s)	52, 86, 138, 448
MvaI	CCWGG	4 cut(s)	52, 86, 138, 448
MwoI	GCNNNNNNNGC	3 cut(s)	133, 188, 443
NarI	GGCGCC	1 cut(s)	134
NcoI	CCATGG	1 cut(s)	10
NdeI	CATATG	1 cut(s)	292
NdeII	GATC	3 cut(s)	27, 265, 529
NheI	GCTAGC	1 cut(s)	94
NlaIII	CATG	2 cut(s)	14, 263
NlaIV	GGNNCC	1 cut(s)	135
NmuCI	GTSAC	2 cut(s)	206, 461
PagI	TCATGA	1 cut(s)	259
PfeI	GAWTC	4 cut(s)	221, 271, 374, 537
PfoI	TCCNGGA	1 cut(s)	50
PinAI	ACCGGT	1 cut(s)	148
PkrI	GCNGC	1 cut(s)	439
PleI	GAGTC	1 cut(s)	477
PluTI	GGCGCC	1 cut(s)	137
PpsI	GAGTC	1 cut(s)	477
Ppu21I	YACGTR	1 cut(s)	80
Psp6I	CCWGG	4 cut(s)	50, 84, 136, 446
PspGI	CCWGG	4 cut(s)	50, 84, 136, 446
PspN4I	GGNNCC	1 cut(s)	135
PspPI	GGNCC	1 cut(s)	14
PsuI	RGATCY	2 cut(s)	27, 265
SaqAI	TTAA	1 cut(s)	168
SatI	GCNGC	1 cut(s)	438
Sau3AI	GATC	3 cut(s)	27, 265, 529
Sau96I	GGNCC	1 cut(s)	14
SchI	GAGTC	1 cut(s)	478
ScrFI	CCNGG	4 cut(s)	52, 86, 138, 448
SfaNI	GCATC	1 cut(s)	298
SfcI	CTRYAG	1 cut(s)	415
SfoI	GGCGCC	1 cut(s)	135
SmlI	CTYRAG	1 cut(s)	473
SmoI	CTYRAG	1 cut(s)	473
Sse9I	AATT	4 cut(s)	298, 381, 409, 424
SsiI	CCGC	1 cut(s)	404
SspDI	GGCGCC	1 cut(s)	133
SspMI	CTAG	3 cut(s)	95, 101, 248
StyD4I	CCNGG	4 cut(s)	50, 84, 136, 446
StyI	CCWWGG	1 cut(s)	10
TaiI	ACGT	2 cut(s)	82, 336
TaqI	TCGA	1 cut(s)	160
TasI	AATT	4 cut(s)	298, 381, 409, 424
TfiI	GAWTC	4 cut(s)	221, 271, 374, 537
Tru1I	TTAA	1 cut(s)	168
Tru9I	TTAA	1 cut(s)	168
TseFI	GTSAC	2 cut(s)	206, 461
TseI	GCWGC	1 cut(s)	437
Tsp45I	GTSAC	2 cut(s)	206, 461
TspDTI	ATGAA	3 cut(s)	248, 276, 342
XapI	RAATTY	1 cut(s)	298
XspI	CTAG	3 cut(s)	95, 101, 248

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.