tRNase Z endonuclease
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| prunus_persica | Prupe.1G296500_v2.0.a1 Prupe.5G215300_v2.0.a1 Prupe.6G337500_v2.0.a1 Prupe.7G044400_v2.0.a1 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 182 |
| AcsI | RAATTY | 3 cut(s) | 13, 29, 36 |
| AcuI | CTGAAG | 1 cut(s) | 228 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 167 |
| AgsI | TTSAA | 2 cut(s) | 83, 98 |
| AoxI | GGCC | 1 cut(s) | 182 |
| ApoI | RAATTY | 3 cut(s) | 13, 29, 36 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 13 |
| BalI | TGGCCA | 1 cut(s) | 184 |
| BciVI | GTATCC | 2 cut(s) | 217, 226 |
| BfaI | CTAG | 1 cut(s) | 209 |
| BfuI | GTATCC | 2 cut(s) | 217, 226 |
| BpmI | CTGGAG | 1 cut(s) | 309 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 167 |
| Bse1I | ACTGG | 1 cut(s) | 220 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 167 |
| BseNI | ACTGG | 1 cut(s) | 220 |
| BshFI | GGCC | 1 cut(s) | 184 |
| BslFI | GGGAC | 1 cut(s) | 226 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 167 |
| BsmFI | GGGAC | 1 cut(s) | 226 |
| BsmI | GAATGC | 1 cut(s) | 137 |
| BsnI | GGCC | 1 cut(s) | 184 |
| BspANI | GGCC | 1 cut(s) | 184 |
| BsrI | ACTGG | 1 cut(s) | 220 |
| BsuI | GTATCC | 2 cut(s) | 217, 226 |
| BsuRI | GGCC | 1 cut(s) | 184 |
| BtsIMutI | CAGTG | 1 cut(s) | 252 |
| CviAII | CATG | 2 cut(s) | 167, 186 |
| CviJI | RGCY | 2 cut(s) | 172, 184 |
| CviKI_1 | RGCY | 2 cut(s) | 172, 184 |
| EaeI | YGGCCR | 1 cut(s) | 182 |
| Eco57I | CTGAAG | 1 cut(s) | 228 |
| EcoRI | GAATTC | 1 cut(s) | 13 |
| FaeI | CATG | 2 cut(s) | 170, 189 |
| FaiI | YATR | 5 cut(s) | 117, 168, 187, 278, 313 |
| FaqI | GGGAC | 1 cut(s) | 226 |
| FatI | CATG | 2 cut(s) | 166, 185 |
| FspBI | CTAG | 1 cut(s) | 209 |
| GsuI | CTGGAG | 1 cut(s) | 309 |
| HaeIII | GGCC | 1 cut(s) | 184 |
| Hin1II | CATG | 2 cut(s) | 170, 189 |
| Hpy188I | TCNGA | 3 cut(s) | 19, 35, 130 |
| HpyAV | CCTTC | 1 cut(s) | 252 |
| HpyCH4V | TGCA | 2 cut(s) | 135, 202 |
| Hsp92II | CATG | 2 cut(s) | 170, 189 |
| LpnPI | CCDG | 4 cut(s) | 201, 215, 273, 310 |
| MaeI | CTAG | 1 cut(s) | 209 |
| MlsI | TGGCCA | 1 cut(s) | 184 |
| MluCI | AATT | 6 cut(s) | 13, 29, 36, 123, 177, 306 |
| MluNI | TGGCCA | 1 cut(s) | 184 |
| MnlI | CCTC | 1 cut(s) | 286 |
| Mox20I | TGGCCA | 1 cut(s) | 184 |
| MroXI | GAANNNNTTC | 1 cut(s) | 13 |
| MscI | TGGCCA | 1 cut(s) | 184 |
| MseI | TTAA | 3 cut(s) | 26, 104, 282 |
| Msp20I | TGGCCA | 1 cut(s) | 184 |
| Mva1269I | GAATGC | 1 cut(s) | 137 |
| NlaIII | CATG | 2 cut(s) | 170, 189 |
| PctI | GAATGC | 1 cut(s) | 137 |
| PdmI | GAANNNNTTC | 1 cut(s) | 13 |
| SaqAI | TTAA | 3 cut(s) | 26, 104, 282 |
| SetI | ASST | 1 cut(s) | 297 |
| SgeI | CNNG | 9 cut(s) | 18, 77, 179, 198, 221, 228, 242, 277, 300 |
| Sse9I | AATT | 6 cut(s) | 13, 29, 36, 123, 177, 306 |
| SspMI | CTAG | 1 cut(s) | 209 |
| TasI | AATT | 6 cut(s) | 13, 29, 36, 123, 177, 306 |
| Tru1I | TTAA | 3 cut(s) | 26, 104, 282 |
| Tru9I | TTAA | 3 cut(s) | 26, 104, 282 |
| TscAI | CASTG | 1 cut(s) | 252 |
| TspDTI | ATGAA | 1 cut(s) | 155 |
| TspRI | CASTG | 1 cut(s) | 252 |
| XapI | RAATTY | 3 cut(s) | 13, 29, 36 |
| XmnI | GAANNNNTTC | 1 cut(s) | 13 |
| XspI | CTAG | 1 cut(s) | 209 |