Prupe.7G079600_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
11530493 .. 11533768
3276 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G079600.1

Sequence Viewer

Length: 246 bp
ATGTTTTTTTTTTTTTTTTTGGTGCTCTCCATGGTGTTTACCACAATCTCTAGGGCTAAAGGCGTTGTTCAATGCAGTTGCAGAGGCTTGAGAAGCTATGAGCATTTTGCATTTGAAGTCCAAATTTTTTTTGCCCTTTTTCTGCCAAATTTCGAATGTAATTTTTTTTTTTTTTTGCGCTCTCCATGGTGTTTACCACAATCTCTAGGGCTAAAGGCGTTGTTCAATGCAGTTGCAGAGGCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

82

Amino Acids

9.44

Weight (kDa)

8.49

Isoelectric Point (pI)

46.39

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0024567)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 123, 148
AgsI TTSAA 3 cut(s) 71, 116, 226
AluBI AGCT 1 cut(s) 96
AluI AGCT 1 cut(s) 96
Alw21I GWGCWC 1 cut(s) 27
ApoI RAATTY 2 cut(s) 123, 148
AspLEI GCGC 1 cut(s) 180
AsuII TTCGAA 1 cut(s) 153
Bbv12I GWGCWC 1 cut(s) 27
BfaI CTAG 2 cut(s) 51, 206
Bpu14I TTCGAA 1 cut(s) 153
BpuEI CTTGAG 1 cut(s) 109
BsaJI CCNNGG 2 cut(s) 30, 185
BseDI CCNNGG 2 cut(s) 30, 185
BsiHKAI GWGCWC 1 cut(s) 27
Bsp119I TTCGAA 1 cut(s) 153
Bsp1286I GDGCHC 1 cut(s) 27
Bsp19I CCATGG 2 cut(s) 30, 185
BspT104I TTCGAA 1 cut(s) 153
BssECI CCNNGG 2 cut(s) 30, 185
BssT1I CCWWGG 2 cut(s) 30, 185
BstBI TTCGAA 1 cut(s) 153
BstDSI CCRYGG 2 cut(s) 30, 185
BstHHI GCGC 1 cut(s) 180
BstMWI GCNNNNNNNGC 1 cut(s) 93
BtgI CCRYGG 2 cut(s) 30, 185
CfoI GCGC 1 cut(s) 180
CviAII CATG 2 cut(s) 31, 186
CviJI RGCY 5 cut(s) 56, 87, 96, 211, 242
CviKI_1 RGCY 5 cut(s) 56, 87, 96, 211, 242
Eco130I CCWWGG 2 cut(s) 30, 185
EcoT14I CCWWGG 2 cut(s) 30, 185
ErhI CCWWGG 2 cut(s) 30, 185
FaeI CATG 2 cut(s) 34, 189
FaiI YATR 3 cut(s) 32, 99, 187
FatI CATG 2 cut(s) 30, 185
FspBI CTAG 2 cut(s) 51, 206
GlaI GCGC 1 cut(s) 179
HhaI GCGC 1 cut(s) 180
Hin1II CATG 2 cut(s) 34, 189
Hin6I GCGC 1 cut(s) 178
HinP1I GCGC 1 cut(s) 178
Hpy166II GTNNAC 2 cut(s) 39, 194
Hpy8I GTNNAC 2 cut(s) 39, 194
HpyCH4V TGCA 5 cut(s) 75, 81, 110, 230, 236
HpyF10VI GCNNNNNNNGC 1 cut(s) 93
Hsp92II CATG 2 cut(s) 34, 189
HspAI GCGC 1 cut(s) 178
MaeI CTAG 2 cut(s) 51, 206
MhlI GDGCHC 1 cut(s) 27
MluCI AATT 3 cut(s) 123, 148, 160
MnlI CCTC 2 cut(s) 77, 232
MwoI GCNNNNNNNGC 1 cut(s) 93
NcoI CCATGG 2 cut(s) 30, 185
NlaIII CATG 2 cut(s) 34, 189
NspV TTCGAA 1 cut(s) 153
SduI GDGCHC 1 cut(s) 27
SetI ASST 1 cut(s) 98
SfuI TTCGAA 1 cut(s) 153
SgeI CNNG 5 cut(s) 43, 63, 100, 198, 218
SmlI CTYRAG 1 cut(s) 88
SmoI CTYRAG 1 cut(s) 88
Sse9I AATT 3 cut(s) 123, 148, 160
SspMI CTAG 2 cut(s) 51, 206
StyI CCWWGG 2 cut(s) 30, 185
TaqI TCGA 1 cut(s) 153
TasI AATT 3 cut(s) 123, 148, 160
XapI RAATTY 2 cut(s) 123, 148
XspI CTAG 2 cut(s) 51, 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.