Prupe.7G115600_v2.0.a1

Belongs to the eukaryotic ribosomal protein eL15 family

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Forward (+)
14085513 .. 14086715
1203 bp
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UTR
Exon/CDS
Intron
Prupe.7G115600.1_v2.0.a1.CDS.2

Sequence Viewer

Length: 186 bp
ATGGGAGGTTACAAGTATCAGTCGGAGATATGGAGGAAGAAGCAATCCGATTTGATGAGGTTCGTCCAGAGGGTGCGCTGTTGGGAATATCGCCAGCATCCTTCAATTGTTCGTGTCACAAGACCCACCCGCCCTGACAAGGCTCGTCGTTTGGGTTACAAGGCCAAGCAGGTTGCTCCTTGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

62

Amino Acids

7.44

Weight (kDa)

10.75

Isoelectric Point (pI)

54.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029084)

Species Orthologous Gene IDs
prunus_persica Prupe.7G115600_v2.0.a1
rosa_multiflora Rmu_co8251981.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 160
AciI CCGC 1 cut(s) 130
AfiI CCNNNNNNNGG 1 cut(s) 139
AgsI TTSAA 1 cut(s) 105
AoxI GGCC 1 cut(s) 162
AspLEI GCGC 1 cut(s) 78
BfuAI ACCTGC 1 cut(s) 160
BmsI GCATC 1 cut(s) 106
Bsc4I CCNNNNNNNGG 1 cut(s) 139
BseGI GGATG 1 cut(s) 97
BseLI CCNNNNNNNGG 1 cut(s) 139
BshFI GGCC 1 cut(s) 164
BslI CCNNNNNNNGG 1 cut(s) 139
BsnI GGCC 1 cut(s) 164
BspACI CCGC 1 cut(s) 130
BspANI GGCC 1 cut(s) 164
BspMI ACCTGC 1 cut(s) 160
BstC8I GCNNGC 1 cut(s) 95
BstF5I GGATG 1 cut(s) 97
BstHHI GCGC 1 cut(s) 78
BsuRI GGCC 1 cut(s) 164
BtsCI GGATG 1 cut(s) 97
BveI ACCTGC 1 cut(s) 160
Cac8I GCNNGC 1 cut(s) 95
CfoI GCGC 1 cut(s) 78
CviJI RGCY 2 cut(s) 143, 164
CviKI_1 RGCY 2 cut(s) 143, 164
FaiI YATR 1 cut(s) 31
FauI CCCGC 1 cut(s) 137
FokI GGATG 1 cut(s) 84
GlaI GCGC 1 cut(s) 77
HaeIII GGCC 1 cut(s) 164
HhaI GCGC 1 cut(s) 78
Hin6I GCGC 1 cut(s) 76
HinP1I GCGC 1 cut(s) 76
Hpy188I TCNGA 2 cut(s) 25, 49
Hpy188III TCNNGA 1 cut(s) 67
Hpy99I CGWCG 1 cut(s) 150
HpyAV CCTTC 1 cut(s) 111
HspAI GCGC 1 cut(s) 76
LmnI GCTCC 1 cut(s) 181
LpnPI CCDG 4 cut(s) 80, 107, 147, 155
LweI GCATC 1 cut(s) 106
MaeIII GTNAC 3 cut(s) 8, 115, 155
MboII GAAGA 1 cut(s) 49
MfeI CAATTG 1 cut(s) 105
MluCI AATT 1 cut(s) 105
MnlI CCTC 3 cut(s) 27, 51, 63
MunI CAATTG 1 cut(s) 105
NmuCI GTSAC 1 cut(s) 115
SetI ASST 3 cut(s) 10, 62, 174
SfaNI GCATC 1 cut(s) 106
Sse9I AATT 1 cut(s) 105
SsiI CCGC 1 cut(s) 130
TasI AATT 1 cut(s) 105
TseFI GTSAC 1 cut(s) 115
Tsp45I GTSAC 1 cut(s) 115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.