Rmu_co8251981.1_g000001

Belongs to the eukaryotic ribosomal protein eL15 family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8251981.1
Physical Location & Seq
Reverse (-)
1 .. 599
599 bp
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UTR
Exon/CDS
Intron
Rmu_co8251981.1_g000001.1.cds

Sequence Viewer

Length: 201 bp
atgggagcttacaagtatgtgtcggagctatggcggaagaagcaatctgatgtgatggggttcgtccagagggttcgctgctgggactaccgtcagcacccttcgattgtccgagtcacaaggcccacccgccctgacaaggctcgccgtctcggctacaaggccaagcaggtttacaacgatttctttttttataatcct
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

67

Amino Acids

8.24

Weight (kDa)

10.28

Isoelectric Point (pI)

44.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0029084)

Species Orthologous Gene IDs
prunus_persica Prupe.7G115600_v2.0.a1
rosa_multiflora Rmu_co8251981.1_g000001

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 195
Acc36I ACCTGC 1 cut(s) 160
AciI CCGC 2 cut(s) 34, 130
AfiI CCNNNNNNNGG 1 cut(s) 139
AluBI AGCT 2 cut(s) 8, 28
AluI AGCT 2 cut(s) 8, 28
Alw26I GTCTC 1 cut(s) 155
AoxI GGCC 2 cut(s) 122, 162
ApeKI GCWGC 1 cut(s) 78
AspS9I GGNCC 1 cut(s) 123
BbvI GCAGC 1 cut(s) 65
BccI CCATC 1 cut(s) 49
BceAI ACGGC 1 cut(s) 132
BcoDI GTCTC 1 cut(s) 155
BfuAI ACCTGC 1 cut(s) 160
BglI GCCNNNNNGGC 1 cut(s) 153
BisI GCNGC 1 cut(s) 79
BlsI GCNGC 1 cut(s) 80
BmgT120I GGNCC 1 cut(s) 123
BoxI GACNNNNGTC 1 cut(s) 90
Bsc4I CCNNNNNNNGG 1 cut(s) 139
BseLI CCNNNNNNNGG 1 cut(s) 139
BseXI GCAGC 1 cut(s) 65
BseYI CCCAGC 1 cut(s) 81
BshFI GGCC 2 cut(s) 124, 164
BslFI GGGAC 1 cut(s) 98
BslI CCNNNNNNNGG 1 cut(s) 139
BsmAI GTCTC 1 cut(s) 155
BsmBI CGTCTC 1 cut(s) 155
BsmFI GGGAC 1 cut(s) 98
BsnI GGCC 2 cut(s) 124, 164
BspACI CCGC 2 cut(s) 34, 130
BspANI GGCC 2 cut(s) 124, 164
BspMI ACCTGC 1 cut(s) 160
Bst4CI ACNGT 1 cut(s) 92
BstC8I GCNNGC 1 cut(s) 145
BstMAI GTCTC 1 cut(s) 155
BstMWI GCNNNNNNNGC 2 cut(s) 40, 153
BstPAI GACNNNNGTC 1 cut(s) 90
BstV1I GCAGC 1 cut(s) 65
BsuRI GGCC 2 cut(s) 124, 164
BveI ACCTGC 1 cut(s) 160
Cac8I GCNNGC 1 cut(s) 145
Cfr13I GGNCC 1 cut(s) 123
CviJI RGCY 6 cut(s) 8, 28, 124, 143, 156, 164
CviKI_1 RGCY 6 cut(s) 8, 28, 124, 143, 156, 164
EciI GGCGGA 1 cut(s) 49
Esp3I CGTCTC 1 cut(s) 155
FaiI YATR 3 cut(s) 18, 31, 195
FaqI GGGAC 1 cut(s) 98
FauI CCCGC 1 cut(s) 137
Fnu4HI GCNGC 1 cut(s) 79
Fsp4HI GCNGC 1 cut(s) 79
GluI GCNGC 1 cut(s) 79
GsaI CCCAGC 1 cut(s) 85
HaeIII GGCC 2 cut(s) 124, 164
HinfI GANTC 1 cut(s) 114
Hpy166II GTNNAC 1 cut(s) 175
Hpy188I TCNGA 3 cut(s) 25, 49, 113
Hpy188III TCNNGA 1 cut(s) 67
Hpy8I GTNNAC 1 cut(s) 175
HpyAV CCTTC 1 cut(s) 111
HpyCH4III ACNGT 1 cut(s) 92
HpyF10VI GCNNNNNNNGC 2 cut(s) 40, 153
LmnI GCTCC 2 cut(s) 5, 25
LpnPI CCDG 4 cut(s) 67, 80, 147, 155
Lsp1109I GCAGC 1 cut(s) 65
MaeIII GTNAC 1 cut(s) 115
MboII GAAGA 1 cut(s) 49
MlyI GAGTC 1 cut(s) 123
MnlI CCTC 1 cut(s) 63
MwoI GCNNNNNNNGC 2 cut(s) 40, 153
NmeAIII GCCGAG 1 cut(s) 132
NmuCI GTSAC 1 cut(s) 115
PkrI GCNGC 1 cut(s) 80
PleI GAGTC 1 cut(s) 122
PpsI GAGTC 1 cut(s) 122
PshAI GACNNNNGTC 1 cut(s) 90
PsiI TTATAA 1 cut(s) 195
PspFI CCCAGC 1 cut(s) 81
PspPI GGNCC 1 cut(s) 123
SatI GCNGC 1 cut(s) 79
Sau96I GGNCC 1 cut(s) 123
SchI GAGTC 1 cut(s) 123
SetI ASST 3 cut(s) 10, 30, 174
SsiI CCGC 2 cut(s) 34, 130
TaaI ACNGT 1 cut(s) 92
TaqI TCGA 1 cut(s) 104
TseFI GTSAC 1 cut(s) 115
TseI GCWGC 1 cut(s) 78
Tsp45I GTSAC 1 cut(s) 115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.