Prupe.7G222600_v2.0.a1

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0022345
Physical Location & Seq
Forward (+)
19846193 .. 19849678
3486 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G222600.2

Sequence Viewer

Length: 2088 bp
ATGAAAGCTAGGCATCAGCTTCGCGACGCCGTAGACTTGTTGTACTCTCGCGGCTGCGCCACCGCTGAGCCCTACACGCGGCTTGTGCTCGAATGCGTACGAGCAGACGATGTTTCCCAAGCAAAGAGACTGCAATCTCACATGGACCTTCACTTGTTTCAGCCCACCAAGACTTTCCTCCATAATAGGATCCTCCAGCTCTATGCCAAATCCGGGAACCTTGGTGACGCTCGAGACCTGTTTGACAAAATGCCCAAGAAAGACGTTTACTCATGGAACGCCATGCTTTCTGCTTATGCAAAATCTGGGTCTGTTGAGGAGTTGGGGACAATCTTCGATCAGATGCCTTCTCGCGATTTGGTCTCCTACAATACCGTGATTGCTGGTGCGACGGCAAATGGGTGTTGGGGCAAGGCGTTTGAGGTTTTTGTTAAAATGCAAGAGGAAGGGTTTGAGCCGTCAGAGCATACATTTGTGAGCGTGTTAAAAGCGTGCACCAGGTTGCTGGGTTTTAGGCTTGGGAAGCAAATTCATGGGAGAGTAGTTGTAGGCAATATGGAAGGGAATGTTTTTCTTTGGAATGCGTTGATCGATATGTATGCCAAATGTGGTGACATTGATCGGGCTCGTTGGTTGTTTGACTGGTTGGTTGGCAAGAATGCGGTGTCTTGGAACTTGATAATTTCTGGCTACTTAAAAAATGGGCAGCCTGAGAAATGCATTGATTTGTTTCATGAAATGCAATCGTCAGGGTTGAAGCCTGACCAGGTTACGGTGTCAAATATTCTCCGTGCTTACTTTCAGAGCGGTAATATAGTTGAAGCAAGGAAGGTATTTGATGAGATTAGGGAGAAGGATAAGATTTGTTGGACAACAATGATAGTTGGTTATGCACAGAATGGCAGAGAAGAGGATGCTCTGATATTGTTTGGTGAGATGCTATTGGAAAATGTCAGACCTGATAGTTTTACCATCTCGAGCGTAGTTAGTTCCTGCGCCAAATTATCATCTTTGTATTATGGCCAGGTTGTTCATGGAAAAGCAGTTCATATGGGAGTTGCTGATCAATTGCTCGTGTCTAGTGCGCTTGTTGATATGTATTGCAAATGTGGAGTTACTGCAGATGCTTGGGTGGTTTTCACACTAATGCCATTTCGAAATGTGGTTTCTTGGAACGCGATGATTACAGGTTATGCACAAAATGGGAAAGATCTAGAGGCCTTGGCCCTCTATGAGAACATGTTACAAGAAAACATAGTTCCAAATAATGTTACTTTCATAGGTGTTTTATCAGCTTGTGTCCATGCTAATTTGATTGAACGAGGACAGAAGTATTTTGATTCAATTAGTGAACGAAGTGGTATGGAACCCACTATGGATCATTATGCCTGTATGGTCTGTCTCCTTGGTCATTCAGGTTACATAAACAAAGCAGTAGATCTTATCAGAAGTATGCCCCATGAACCGAATAGCTTGATTTGGTCCACTCTTCTATCTGTTTGCGCAATGACAGGCGATATCGAACACGGGGAGATGGCAGCTAGACATCTCTTTGAATTGGAGCCACTCGGTGCTGAACCTTACATCATGCTTTCCAACATGTATGCTACTTGTGGAAGATGGAAAGATGTGGCATGCATGAGGTCTCTCATGAAGGACAGGAATGTTAAGAAGTTTGCTGCTTACAGTTGGATTGAGATTGATAACGAGGTTCACAAATTCGCATCAGAAGATCGAACTCATCCCGAAGCAAAAGAAATATATGAAGAGCTGAACACACTGATTAGGAAACTGCAGGAAACTGGGTTTACTCCTGACACAAAACTGGTTCTTCATGATGTTGGGGAGGAGGAGAAATTTGAGTCCATCTGTTATCACAGTGAGAAACTTGCTCTTGCATTTGGTTTAACCAAAAAACCTCATGGAAGTATACCAATAAGAATTATAAAGAACATTCGTGTTTGTGGTGATTGCCATGAGTTTATGAAGCTTGTGTCTCAAGCTACTGGACGGCTCATCATCTTAAGAGATTCAAAAAGATTTCATCATTTTATTGATGGGCATTGCTCCTGCAAGAACTGCTGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2

Protein Analysis

696

Amino Acids

78.55

Weight (kDa)

6.4

Isoelectric Point (pI)

46.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0022345)

Species Orthologous Gene IDs
malus_domestica MD15G1193800.v1.1
prunus_persica Prupe.7G222600_v2.0.a1 Prupe.7G222600_v2.0.a1
pyrus_communis pycom15g17360

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1946
Acc16I TGCGCA 1 cut(s) 1504
AccBSI CCGCTC 1 cut(s) 807
AccI GTMKAC 2 cut(s) 33, 1930
AccII CGCG 5 cut(s) 24, 51, 79, 354, 1178
AciI CCGC 5 cut(s) 51, 63, 79, 662, 807
AclWI GGATC 3 cut(s) 184, 197, 1386
AcoI YGGCCR 1 cut(s) 1021
AcsI RAATTY 3 cut(s) 528, 1718, 1856
AcyI GRCGYC 1 cut(s) 27
AdeI CACNNNGTG 1 cut(s) 1571
AfaI GTAC 2 cut(s) 44, 99
AfiI CCNNNNNNNGG 3 cut(s) 78, 213, 772
AflII CTTAAG 1 cut(s) 2023
AflIII ACRYGT 2 cut(s) 1239, 1599
AgsI TTSAA 6 cut(s) 757, 821, 1319, 1344, 1556, 2034
AjnI CCWGG 3 cut(s) 497, 765, 1023
AloI GAACNNNNNNTCC 2 cut(s) 1029, 1061
AluBI AGCT 9 cut(s) 8, 19, 199, 1295, 1473, 1541, 1771, 1990, 2003
AluI AGCT 9 cut(s) 8, 19, 199, 1295, 1473, 1541, 1771, 1990, 2003
Alw21I GWGCWC 2 cut(s) 90, 497
Alw26I GTCTC 6 cut(s) 121, 228, 367, 1406, 1650, 2001
Alw44I GTGCAC 1 cut(s) 493
AlwI GGATC 3 cut(s) 184, 197, 1386
Ama87I CYCGRG 2 cut(s) 231, 976
AoxI GGCC 3 cut(s) 1021, 1218, 1224
ApaLI GTGCAC 1 cut(s) 493
ApeKI GCWGC 4 cut(s) 54, 706, 1538, 1679
ApoI RAATTY 3 cut(s) 528, 1718, 1856
ArsI GACNNNNNNTTYG 2 cut(s) 293, 325
AspLEI GCGC 4 cut(s) 59, 998, 1087, 1505
AspS9I GGNCC 3 cut(s) 145, 1225, 1482
AsuC2I CCSGG 1 cut(s) 214
AsuHPI GGTGA 4 cut(s) 236, 623, 944, 1979
AsuII TTCGAA 1 cut(s) 1156
AvaI CYCGRG 2 cut(s) 231, 976
AvaII GGWCC 2 cut(s) 145, 1482
BaeGI GKGCMC 1 cut(s) 497
BalI TGGCCA 1 cut(s) 1023
BamHI GGATCC 1 cut(s) 189
BanII GRGCYC 2 cut(s) 72, 628
BauI CACGAG 1 cut(s) 1073
Bbv12I GWGCWC 2 cut(s) 90, 497
BbvI GCAGC 4 cut(s) 41, 718, 1550, 1666
BccI CCATC 5 cut(s) 980, 1528, 1614, 1874, 2051
BceAI ACGGC 4 cut(s) 14, 408, 442, 2027
BcgI CGANNNNNNTGC 3 cut(s) 36, 581, 615
BciT130I CCWGG 3 cut(s) 499, 767, 1025
BclI TGATCA 1 cut(s) 1063
BcnI CCSGG 1 cut(s) 214
BcoDI GTCTC 6 cut(s) 121, 228, 367, 1406, 1650, 2001
BfaI CTAG 4 cut(s) 9, 1080, 1214, 1542
BfmI CTRYAG 2 cut(s) 1119, 1793
BfrI CTTAAG 1 cut(s) 2023
BglII AGATCT 2 cut(s) 1210, 1438
BisI GCNGC 6 cut(s) 52, 55, 80, 707, 1539, 1680
BlpI GCTNAGC 1 cut(s) 66
BlsI GCNGC 6 cut(s) 53, 56, 81, 708, 1540, 1681
Bme1390I CCNGG 4 cut(s) 214, 499, 767, 1025
Bme18I GGWCC 2 cut(s) 145, 1482
BmeT110I CYCGRG 2 cut(s) 231, 976
BmgT120I GGNCC 3 cut(s) 145, 1225, 1482
BmiI GGNNCC 4 cut(s) 191, 218, 1368, 1563
BmrFI CCNGG 4 cut(s) 214, 499, 767, 1025
BmrI ACTGGG 1 cut(s) 1812
BmsI GCATC 6 cut(s) 22, 333, 904, 927, 1114, 1733
BmuI ACTGGG 1 cut(s) 1812
BpmI CTGGAG 1 cut(s) 179
Bpu1102I GCTNAGC 1 cut(s) 66
Bpu14I TTCGAA 1 cut(s) 1156
BpuEI CTTGAG 1 cut(s) 1983
BpuMI CCSGG 1 cut(s) 214
Bsa29I ATCGAT 1 cut(s) 591
BsaHI GRCGYC 1 cut(s) 27
BsaI GGTCTC 3 cut(s) 228, 367, 1650
BsaJI CCNNGG 3 cut(s) 220, 1221, 1405
Bsc4I CCNNNNNNNGG 3 cut(s) 78, 213, 772
Bse1I ACTGG 4 cut(s) 647, 1807, 1830, 2011
Bse3DI GCAATG 2 cut(s) 1512, 2062
BseBI CCWGG 3 cut(s) 499, 767, 1025
BseCI ATCGAT 1 cut(s) 591
BseDI CCNNGG 3 cut(s) 220, 1221, 1405
BseGI GGATG 2 cut(s) 919, 1741
BseLI CCNNNNNNNGG 3 cut(s) 78, 213, 772
BseMI GCAATG 2 cut(s) 1512, 2062
BseMII CTCAG 2 cut(s) 57, 702
BseNI ACTGG 4 cut(s) 647, 1807, 1830, 2011
BseRI GAGGAG 3 cut(s) 332, 1862, 1865
BseSI GKGCMC 1 cut(s) 497
BseXI GCAGC 4 cut(s) 41, 718, 1550, 1666
BseYI CCCAGC 1 cut(s) 505
Bsh1236I CGCG 5 cut(s) 24, 51, 79, 354, 1178
BshFI GGCC 3 cut(s) 1023, 1220, 1226
BshVI ATCGAT 1 cut(s) 591
BsiHKAI GWGCWC 2 cut(s) 90, 497
BsiHKCI CYCGRG 2 cut(s) 231, 976
BsiSI CCGG 1 cut(s) 213
BsiWI CGTACG 1 cut(s) 97
BslFI GGGAC 1 cut(s) 340
BslI CCNNNNNNNGG 3 cut(s) 78, 213, 772
BsmAI GTCTC 6 cut(s) 121, 228, 367, 1406, 1650, 2001
BsmFI GGGAC 1 cut(s) 340
BsmI GAATGC 3 cut(s) 98, 586, 664
BsnI GGCC 3 cut(s) 1023, 1220, 1226
Bso31I GGTCTC 3 cut(s) 228, 367, 1650
BsoBI CYCGRG 2 cut(s) 231, 976
Bsp119I TTCGAA 1 cut(s) 1156
Bsp1286I GDGCHC 4 cut(s) 72, 90, 497, 628
Bsp143I GATC 9 cut(s) 189, 337, 588, 619, 1063, 1210, 1378, 1438, 1732
Bsp1720I GCTNAGC 1 cut(s) 66
Bsp68I TCGCGA 2 cut(s) 24, 354
BspACI CCGC 5 cut(s) 51, 63, 79, 662, 807
BspANI GGCC 3 cut(s) 1023, 1220, 1226
BspCNI CTCAG 2 cut(s) 58, 703
BspDI ATCGAT 1 cut(s) 591
BspFNI CGCG 5 cut(s) 24, 51, 79, 354, 1178
BspHI TCATGA 3 cut(s) 733, 1650, 1834
BspLI GGNNCC 4 cut(s) 191, 218, 1368, 1563
BspMAI CTGCAG 2 cut(s) 1123, 1797
BspPI GGATC 3 cut(s) 184, 197, 1386
BspQI GCTCTTC 1 cut(s) 1761
BspT104I TTCGAA 1 cut(s) 1156
BspTI CTTAAG 1 cut(s) 2023
BspTNI GGTCTC 3 cut(s) 228, 367, 1650
BsrBI CCGCTC 1 cut(s) 807
BsrDI GCAATG 2 cut(s) 1512, 2062
BsrI ACTGG 4 cut(s) 647, 1807, 1830, 2011
BssECI CCNNGG 3 cut(s) 220, 1221, 1405
BssMI GATC 9 cut(s) 189, 337, 588, 619, 1063, 1210, 1378, 1438, 1732
BssNAI GTATAC 1 cut(s) 1931
BssNI GRCGYC 1 cut(s) 27
BssSI CACGAG 1 cut(s) 1073
BssT1I CCWWGG 3 cut(s) 220, 1221, 1405
Bst1107I GTATAC 1 cut(s) 1931
Bst2BI CACGAG 1 cut(s) 1073
Bst2UI CCWGG 3 cut(s) 499, 767, 1025
Bst4CI ACNGT 4 cut(s) 376, 775, 1688, 1880
Bst6I CTCTTC 3 cut(s) 903, 1494, 1761
BstACI GRCGYC 1 cut(s) 27
BstAFI CTTAAG 1 cut(s) 2023
BstAPI GCANNNNNTGC 1 cut(s) 2079
BstBI TTCGAA 1 cut(s) 1156
BstC8I GCNNGC 2 cut(s) 493, 1636
BstDEI CTNAG 2 cut(s) 66, 711
BstF5I GGATG 2 cut(s) 919, 1741
BstFNI CGCG 5 cut(s) 24, 51, 79, 354, 1178
BstHHI GCGC 4 cut(s) 59, 998, 1087, 1505
BstKTI GATC 9 cut(s) 192, 340, 591, 622, 1066, 1213, 1381, 1441, 1735
BstMAI GTCTC 6 cut(s) 121, 228, 367, 1406, 1650, 2001
BstMBI GATC 9 cut(s) 189, 337, 588, 619, 1063, 1210, 1378, 1438, 1732
BstMWI GCNNNNNNNGC 5 cut(s) 76, 85, 463, 523, 2079
BstNI CCWGG 3 cut(s) 499, 767, 1025
BstNSI RCATGY 3 cut(s) 1243, 1603, 1638
BstSCI CCNGG 4 cut(s) 212, 497, 765, 1023
BstSFI CTRYAG 2 cut(s) 1119, 1793
BstSLI GKGCMC 1 cut(s) 497
BstUI CGCG 5 cut(s) 24, 51, 79, 354, 1178
BstV1I GCAGC 4 cut(s) 41, 718, 1550, 1666
BstX2I RGATCY 3 cut(s) 189, 1210, 1438
BstXI CCANNNNNNTGG 1 cut(s) 505
BstYI RGATCY 3 cut(s) 189, 1210, 1438
BstZ17I GTATAC 1 cut(s) 1931
Bsu15I ATCGAT 1 cut(s) 591
BsuRI GGCC 3 cut(s) 1023, 1220, 1226
BsuTUI ATCGAT 1 cut(s) 591
BtgZI GCGATG 1 cut(s) 1193
BtsCI GGATG 2 cut(s) 919, 1741
BtsIMutI CAGTG 2 cut(s) 1778, 1885
BtuMI TCGCGA 2 cut(s) 24, 354
Cac8I GCNNGC 2 cut(s) 493, 1636
CciI TCATGA 3 cut(s) 733, 1650, 1834
CfoI GCGC 4 cut(s) 59, 998, 1087, 1505
Cfr13I GGNCC 3 cut(s) 145, 1225, 1482
ClaI ATCGAT 1 cut(s) 591
CseI GACGC 2 cut(s) 35, 236
CsiI ACCWGGT 2 cut(s) 497, 765
Csp6I GTAC 2 cut(s) 43, 98
CviQI GTAC 2 cut(s) 43, 98
DdeI CTNAG 2 cut(s) 66, 711
DpnI GATC 9 cut(s) 191, 339, 590, 621, 1065, 1212, 1380, 1440, 1734
DpnII GATC 9 cut(s) 189, 337, 588, 619, 1063, 1210, 1378, 1438, 1732
DraIII CACNNNGTG 1 cut(s) 1571
EaeI YGGCCR 1 cut(s) 1021
Eam1104I CTCTTC 3 cut(s) 903, 1494, 1761
EarI CTCTTC 3 cut(s) 903, 1494, 1761
Eco130I CCWWGG 3 cut(s) 220, 1221, 1405
Eco147I AGGCCT 1 cut(s) 1220
Eco24I GRGCYC 2 cut(s) 72, 628
Eco31I GGTCTC 3 cut(s) 228, 367, 1650
Eco32I GATATC 1 cut(s) 1519
Eco47I GGWCC 2 cut(s) 145, 1482
Eco88I CYCGRG 2 cut(s) 231, 976
EcoRII CCWGG 3 cut(s) 497, 765, 1023
EcoRV GATATC 1 cut(s) 1519
EcoT14I CCWWGG 3 cut(s) 220, 1221, 1405
EcoT22I ATGCAT 2 cut(s) 722, 1640
EcoT38I GRGCYC 2 cut(s) 72, 628
ErhI CCWWGG 3 cut(s) 220, 1221, 1405
FaqI GGGAC 1 cut(s) 340
FauNDI CATATG 1 cut(s) 1050
FbaI TGATCA 1 cut(s) 1063
FblI GTMKAC 2 cut(s) 33, 1930
Fnu4HI GCNGC 6 cut(s) 52, 55, 80, 707, 1539, 1680
FokI GGATG 2 cut(s) 926, 1728
FriOI GRGCYC 2 cut(s) 72, 628
Fsp4HI GCNGC 6 cut(s) 52, 55, 80, 707, 1539, 1680
FspBI CTAG 4 cut(s) 9, 1080, 1214, 1542
FspI TGCGCA 1 cut(s) 1504
GlaI GCGC 4 cut(s) 58, 997, 1086, 1504
GluI GCNGC 6 cut(s) 52, 55, 80, 707, 1539, 1680
GsaI CCCAGC 1 cut(s) 509
GsuI CTGGAG 1 cut(s) 179
HaeIII GGCC 3 cut(s) 1023, 1220, 1226
HapII CCGG 1 cut(s) 213
HgaI GACGC 2 cut(s) 35, 236
HhaI GCGC 4 cut(s) 59, 998, 1087, 1505
Hin1I GRCGYC 1 cut(s) 27
Hin6I GCGC 4 cut(s) 57, 996, 1085, 1503
HinP1I GCGC 4 cut(s) 57, 996, 1085, 1503
HindIII AAGCTT 1 cut(s) 1988
HinfI GANTC 3 cut(s) 1340, 1862, 2030
HpaII CCGG 1 cut(s) 213
HphI GGTGA 4 cut(s) 236, 623, 944, 1979
Hpy166II GTNNAC 8 cut(s) 34, 268, 495, 1352, 1485, 1714, 1809, 1931
Hpy188I TCNGA 7 cut(s) 342, 463, 804, 921, 956, 1448, 1729
Hpy8I GTNNAC 8 cut(s) 34, 268, 495, 1352, 1485, 1714, 1809, 1931
Hpy99I CGWCG 2 cut(s) 29, 394
HpyAV CCTTC 7 cut(s) 158, 357, 440, 554, 823, 847, 1648
HpyCH4III ACNGT 4 cut(s) 376, 775, 1688, 1880
HpyCH4IV ACGT 1 cut(s) 264
HpyF10VI GCNNNNNNNGC 5 cut(s) 76, 85, 463, 523, 2079
HpyF3I CTNAG 2 cut(s) 66, 711
HpySE526I ACGT 1 cut(s) 264
Hsp92I GRCGYC 1 cut(s) 27
HspAI GCGC 4 cut(s) 57, 996, 1085, 1503
Ksp22I TGATCA 1 cut(s) 1063
Kzo9I GATC 9 cut(s) 189, 337, 588, 619, 1063, 1210, 1378, 1438, 1732
LguI GCTCTTC 1 cut(s) 1761
LmnI GCTCC 2 cut(s) 1561, 2072
Lsp1109I GCAGC 4 cut(s) 41, 718, 1550, 1666
LweI GCATC 6 cut(s) 22, 333, 904, 927, 1114, 1733
MabI ACCWGGT 2 cut(s) 497, 765
MaeI CTAG 4 cut(s) 9, 1080, 1214, 1542
MaeII ACGT 1 cut(s) 264
MaeIII GTNAC 7 cut(s) 224, 611, 769, 1114, 1242, 1270, 1418
MalI GATC 9 cut(s) 191, 339, 590, 621, 1065, 1212, 1380, 1440, 1734
MbiI CCGCTC 1 cut(s) 807
MboI GATC 9 cut(s) 189, 337, 588, 619, 1063, 1210, 1378, 1438, 1732
MboII GAAGA 7 cut(s) 325, 920, 1481, 1629, 1742, 1778, 1823
MfeI CAATTG 1 cut(s) 1067
MflI RGATCY 3 cut(s) 189, 1210, 1438
MhlI GDGCHC 4 cut(s) 72, 90, 497, 628
MlsI TGGCCA 1 cut(s) 1023
MluNI TGGCCA 1 cut(s) 1023
MlyI GAGTC 1 cut(s) 1871
MmeI TCCRAC 3 cut(s) 848, 1620, 1670
Mox20I TGGCCA 1 cut(s) 1023
Mph1103I ATGCAT 2 cut(s) 722, 1640
MscI TGGCCA 1 cut(s) 1023
MseI TTAA 6 cut(s) 432, 485, 695, 1668, 1907, 2024
MslI CAYNNNNRTG 1 cut(s) 1145
Msp20I TGGCCA 1 cut(s) 1023
MspA1I CMGCKG 1 cut(s) 65
MspCI CTTAAG 1 cut(s) 2023
MspI CCGG 1 cut(s) 213
MspR9I CCNGG 4 cut(s) 214, 499, 767, 1025
MunI CAATTG 1 cut(s) 1067
Mva1269I GAATGC 3 cut(s) 98, 586, 664
MvaI CCWGG 3 cut(s) 499, 767, 1025
MvnI CGCG 5 cut(s) 24, 51, 79, 354, 1178
MwoI GCNNNNNNNGC 5 cut(s) 76, 85, 463, 523, 2079
NciI CCSGG 1 cut(s) 214
NdeI CATATG 1 cut(s) 1050
NdeII GATC 9 cut(s) 189, 337, 588, 619, 1063, 1210, 1378, 1438, 1732
NlaIV GGNNCC 4 cut(s) 191, 218, 1368, 1563
NmuCI GTSAC 2 cut(s) 224, 611
NruI TCGCGA 2 cut(s) 24, 354
NsbI TGCGCA 1 cut(s) 1504
NsiI ATGCAT 2 cut(s) 722, 1640
NspI RCATGY 3 cut(s) 1243, 1603, 1638
NspV TTCGAA 1 cut(s) 1156
PaeI GCATGC 1 cut(s) 1638
PaeR7I CTCGAG 2 cut(s) 231, 976
PagI TCATGA 3 cut(s) 733, 1650, 1834
PceI AGGCCT 1 cut(s) 1220
PciI ACATGT 2 cut(s) 1239, 1599
PciSI GCTCTTC 1 cut(s) 1761
PctI GAATGC 3 cut(s) 98, 586, 664
PfeI GAWTC 2 cut(s) 1340, 2030
Pfl23II CGTACG 1 cut(s) 97
PfoI TCCNGGA 1 cut(s) 212
PkrI GCNGC 6 cut(s) 53, 56, 81, 708, 1540, 1681
PleI GAGTC 1 cut(s) 1870
PpsI GAGTC 1 cut(s) 1870
PscI ACATGT 2 cut(s) 1239, 1599
PsiI TTATAA 1 cut(s) 1946
Psp6I CCWGG 3 cut(s) 497, 765, 1023
PspFI CCCAGC 1 cut(s) 505
PspGI CCWGG 3 cut(s) 497, 765, 1023
PspLI CGTACG 1 cut(s) 97
PspN4I GGNNCC 4 cut(s) 191, 218, 1368, 1563
PspPI GGNCC 3 cut(s) 145, 1225, 1482
PstI CTGCAG 2 cut(s) 1123, 1797
PsuI RGATCY 3 cut(s) 189, 1210, 1438
RruI TCGCGA 2 cut(s) 24, 354
RsaI GTAC 2 cut(s) 44, 99
RsaNI GTAC 2 cut(s) 43, 98
RseI CAYNNNNRTG 1 cut(s) 1145
SapI GCTCTTC 1 cut(s) 1761
SaqAI TTAA 6 cut(s) 432, 485, 695, 1668, 1907, 2024
SatI GCNGC 6 cut(s) 52, 55, 80, 707, 1539, 1680
Sau3AI GATC 9 cut(s) 189, 337, 588, 619, 1063, 1210, 1378, 1438, 1732
Sau96I GGNCC 3 cut(s) 145, 1225, 1482
SchI GAGTC 1 cut(s) 1871
ScrFI CCNGG 4 cut(s) 214, 499, 767, 1025
SduI GDGCHC 4 cut(s) 72, 90, 497, 628
SexAI ACCWGGT 2 cut(s) 497, 765
SfaNI GCATC 6 cut(s) 22, 333, 904, 927, 1114, 1733
SfcI CTRYAG 2 cut(s) 1119, 1793
Sfr274I CTCGAG 2 cut(s) 231, 976
SfuI TTCGAA 1 cut(s) 1156
SinI GGWCC 2 cut(s) 145, 1482
SlaI CTCGAG 2 cut(s) 231, 976
SmiMI CAYNNNNRTG 1 cut(s) 1145
SmlI CTYRAG 4 cut(s) 231, 976, 1998, 2023
SmoI CTYRAG 4 cut(s) 231, 976, 1998, 2023
SphI GCATGC 1 cut(s) 1638
SseBI AGGCCT 1 cut(s) 1220
SsiI CCGC 5 cut(s) 51, 63, 79, 662, 807
SspI AATATT 1 cut(s) 784
SspMI CTAG 4 cut(s) 9, 1080, 1214, 1542
StuI AGGCCT 1 cut(s) 1220
StyD4I CCNGG 4 cut(s) 212, 497, 765, 1023
StyI CCWWGG 3 cut(s) 220, 1221, 1405
TaaI ACNGT 4 cut(s) 376, 775, 1688, 1880
TaiI ACGT 1 cut(s) 267
TaqI TCGA 8 cut(s) 90, 232, 336, 591, 977, 1156, 1521, 1735
TatI WGTACW 1 cut(s) 42
TauI GCSGC 2 cut(s) 54, 82
TfiI GAWTC 2 cut(s) 1340, 2030
Tru1I TTAA 6 cut(s) 432, 485, 695, 1668, 1907, 2024
Tru9I TTAA 6 cut(s) 432, 485, 695, 1668, 1907, 2024
TscAI CASTG 2 cut(s) 1785, 1885
TseFI GTSAC 2 cut(s) 224, 611
TseI GCWGC 4 cut(s) 54, 706, 1538, 1679
Tsp45I GTSAC 2 cut(s) 224, 611
TspGWI ACGGA 1 cut(s) 779
TspRI CASTG 2 cut(s) 1785, 1885
Vha464I CTTAAG 1 cut(s) 2023
VneI GTGCAC 1 cut(s) 493
VpaK11BI GGWCC 2 cut(s) 145, 1482
XapI RAATTY 3 cut(s) 528, 1718, 1856
XbaI TCTAGA 1 cut(s) 1213
XceI RCATGY 3 cut(s) 1243, 1603, 1638
XcmI CCANNNNNNNNNTGG 1 cut(s) 1031
XhoI CTCGAG 2 cut(s) 231, 976
XmiI GTMKAC 2 cut(s) 33, 1930
XspI CTAG 4 cut(s) 9, 1080, 1214, 1542
Zsp2I ATGCAT 2 cut(s) 722, 1640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.