Prupe.8G091700_v2.0.a1

No description available

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
12463846 .. 12463971
126 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G091700.1

Sequence Viewer

Length: 126 bp
ATGTCTCCAGTTCTGAGTGAAATCCTTATTTTCGAGTGTATGATAAATTCTACATTCAGGCGCAGGACCCATTTAGTTCAATCATTCTCAGTTGTTTTCCTTTACTGGCTTTATTACGTTTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

42

Amino Acids

4.98

Weight (kDa)

7.96

Isoelectric Point (pI)

113.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0024522)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 46
AgsI TTSAA 1 cut(s) 80
Alw26I GTCTC 1 cut(s) 9
ApoI RAATTY 1 cut(s) 46
AspLEI GCGC 1 cut(s) 63
AspS9I GGNCC 1 cut(s) 66
AvaII GGWCC 1 cut(s) 66
BcoDI GTCTC 1 cut(s) 9
Bme18I GGWCC 1 cut(s) 66
BmgT120I GGNCC 1 cut(s) 66
BmiI GGNNCC 1 cut(s) 68
Bse1I ACTGG 2 cut(s) 8, 110
BseMII CTCAG 2 cut(s) 5, 102
BseNI ACTGG 2 cut(s) 8, 110
BsmAI GTCTC 1 cut(s) 9
BspCNI CTCAG 2 cut(s) 6, 101
BspHI TCATGA 1 cut(s) 122
BspLI GGNNCC 1 cut(s) 68
BsrI ACTGG 2 cut(s) 8, 110
BstDEI CTNAG 2 cut(s) 14, 88
BstHHI GCGC 1 cut(s) 63
BstMAI GTCTC 1 cut(s) 9
CciI TCATGA 1 cut(s) 122
CfoI GCGC 1 cut(s) 63
Cfr13I GGNCC 1 cut(s) 66
CviAII CATG 1 cut(s) 123
CviJI RGCY 1 cut(s) 109
CviKI_1 RGCY 1 cut(s) 109
DdeI CTNAG 2 cut(s) 14, 88
Eco47I GGWCC 1 cut(s) 66
EcoO109I RGGNCCY 1 cut(s) 66
FaeI CATG 1 cut(s) 126
FaiI YATR 2 cut(s) 41, 124
FatI CATG 1 cut(s) 122
FspEI CC 8 cut(s) 21, 38, 43, 49, 82, 83, 91, 113
GlaI GCGC 1 cut(s) 62
HhaI GCGC 1 cut(s) 63
Hin1II CATG 1 cut(s) 126
Hin6I GCGC 1 cut(s) 61
HinP1I GCGC 1 cut(s) 61
Hpy188I TCNGA 1 cut(s) 15
Hpy188III TCNNGA 1 cut(s) 123
HpyCH4IV ACGT 1 cut(s) 117
HpyF3I CTNAG 2 cut(s) 14, 88
HpySE526I ACGT 1 cut(s) 117
Hsp92II CATG 1 cut(s) 126
HspAI GCGC 1 cut(s) 61
LpnPI CCDG 4 cut(s) 21, 43, 49, 91
MaeII ACGT 1 cut(s) 117
MluCI AATT 1 cut(s) 46
NlaIII CATG 1 cut(s) 126
NlaIV GGNNCC 1 cut(s) 68
PagI TCATGA 1 cut(s) 122
PpuMI RGGWCCY 1 cut(s) 66
Psp5II RGGWCCY 1 cut(s) 66
PspN4I GGNNCC 1 cut(s) 68
PspPI GGNCC 1 cut(s) 66
PspPPI RGGWCCY 1 cut(s) 66
Sau96I GGNCC 1 cut(s) 66
SetI ASST 1 cut(s) 120
SgeI CNNG 5 cut(s) 20, 46, 70, 76, 118
SinI GGWCC 1 cut(s) 66
Sse9I AATT 1 cut(s) 46
TaiI ACGT 1 cut(s) 120
TaqI TCGA 1 cut(s) 33
TasI AATT 1 cut(s) 46
TspDTI ATGAA 1 cut(s) 111
VpaK11BI GGWCC 1 cut(s) 66
XapI RAATTY 1 cut(s) 46
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.