Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0024527

Physical Location & Seq

Genomic Coordinates Forward (+)

17393840 .. 17396704

Gene Structure 2865 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G168800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 591 bp

ATGTCCAATGAAACAGGTGATATTTGTGATGTAGGTCCATTCAGAGGGTTGATTCTATCCTCTCCTCATGTAAAGGAATTGAGCCAGACTTCCGCTGGTGGATTTTTGAGCTCCATTACTTCGAGGGCCAATGAGATAGCATCTTCAGTACTTGCAACTATTAGGAGCCAGAGCAACAAGTCGAATCATGGAAATGAAACCTCTGTTGACACGGGAAATAGTGGTAGTACTGGTGATATGTCCGCAGAAAGCACAGCTGATACTCATCACGCTGTTAATGGTTCTTATAAAATTGAGGAAAACCATAATGGTATTGTAAATGTGGATTTGGAGCACCAAGATGGTGATCACCAAGATGAAGATGGTGATGTAGATAGGGAATTGGATTCTAAGCCTAGTTTCAAAAGGAGCTCGTCAAGCAATAAGAAGGACGAGTCTCAGGTTTTAGGGATGAAACAAAAATACGAGTTGATTGATTTGTCACCAGATGCAAGACCCTTGTTAGTTTTTATCAACAAGAGGAGTTTGGCTCAGCGTGGGAATTCACTGAGGCAACGATTGAATATTCTTCTCAATCCTGTTCAGCTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005509 GO:0043167 GO:0043169 GO:0046872

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01100 ko01110 ko04070 ko04072 ko05231 map00561 map00564 map01100 map01110 map04070 map04072 map05231

Pfam Domains

Protein Families

C1_1 DAGK_acc DAGK_cat

Protein Analysis

197

Amino Acids

21.26

Weight (kDa)

5.32

Isoelectric Point (pI)

54.68

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0024527)

Species	Orthologous Gene IDs
prunus_persica	Prupe.3G273400_v2.0.a1 Prupe.3G273400_v2.0.a1 Prupe.8G168800_v2.0.a1

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	288
AciI	CCGC	2 cut(s)	93, 243
AcsI	RAATTY	1 cut(s)	541
AcuI	CTGAAG	1 cut(s)	129
AfaI	GTAC	2 cut(s)	150, 229
AfiI	CCNNNNNNNGG	1 cut(s)	44
AgsI	TTSAA	2 cut(s)	403, 562
AluBI	AGCT	4 cut(s)	111, 257, 411, 586
AluI	AGCT	4 cut(s)	111, 257, 411, 586
Alw21I	GWGCWC	3 cut(s)	113, 336, 413
Alw26I	GTCTC	1 cut(s)	441
AoxI	GGCC	1 cut(s)	126
ApoI	RAATTY	1 cut(s)	541
AspS9I	GGNCC	2 cut(s)	35, 126
AsuHPI	GGTGA	6 cut(s)	29, 245, 341, 356, 377, 474
AvaII	GGWCC	1 cut(s)	35
BanII	GRGCYC	2 cut(s)	113, 413
Bbv12I	GWGCWC	3 cut(s)	113, 336, 413
BccI	CCATC	2 cut(s)	335, 356
BclI	TGATCA	1 cut(s)	346
BcoDI	GTCTC	1 cut(s)	441
BfaI	CTAG	1 cut(s)	396
BlpI	GCTNAGC	1 cut(s)	531
BmcAI	AGTACT	2 cut(s)	150, 229
Bme18I	GGWCC	1 cut(s)	35
BmgT120I	GGNCC	2 cut(s)	35, 126
BmiI	GGNNCC	1 cut(s)	167
BmsI	GCATC	2 cut(s)	149, 478
BplI	GAGNNNNNCTC	2 cut(s)	514, 546
Bpu1102I	GCTNAGC	1 cut(s)	531
BsaBI	GATNNNNATC	2 cut(s)	264, 345
Bsc4I	CCNNNNNNNGG	1 cut(s)	44
Bse1I	ACTGG	1 cut(s)	235
Bse8I	GATNNNNATC	2 cut(s)	264, 345
BseGI	GGATG	1 cut(s)	456
BseJI	GATNNNNATC	2 cut(s)	264, 345
BseLI	CCNNNNNNNGG	1 cut(s)	44
BseMII	CTCAG	3 cut(s)	452, 539, 545
BseNI	ACTGG	1 cut(s)	235
BseRI	GAGGAG	2 cut(s)	54, 535
BshFI	GGCC	1 cut(s)	128
BsiHKAI	GWGCWC	3 cut(s)	113, 336, 413
BslI	CCNNNNNNNGG	1 cut(s)	44
BsmAI	GTCTC	1 cut(s)	441
BsnI	GGCC	1 cut(s)	128
Bsp1286I	GDGCHC	3 cut(s)	113, 336, 413
Bsp143I	GATC	1 cut(s)	346
Bsp1720I	GCTNAGC	1 cut(s)	531
BspACI	CCGC	2 cut(s)	93, 243
BspANI	GGCC	1 cut(s)	128
BspCNI	CTCAG	3 cut(s)	451, 540, 544
BspLI	GGNNCC	1 cut(s)	167
BsrI	ACTGG	1 cut(s)	235
BssMI	GATC	1 cut(s)	346
BstDEI	CTNAG	4 cut(s)	390, 438, 531, 548
BstF5I	GGATG	1 cut(s)	456
BstKTI	GATC	1 cut(s)	349
BstMAI	GTCTC	1 cut(s)	441
BstMBI	GATC	1 cut(s)	346
BstMWI	GCNNNNNNNGC	1 cut(s)	417
BsuRI	GGCC	1 cut(s)	128
BtsCI	GGATG	1 cut(s)	456
BtsIMutI	CAGTG	1 cut(s)	545
Cfr13I	GGNCC	2 cut(s)	35, 126
Csp6I	GTAC	2 cut(s)	149, 228
CviAII	CATG	2 cut(s)	68, 188
CviJI	RGCY	9 cut(s)	84, 111, 128, 168, 257, 394, 411, 530, 586
CviKI_1	RGCY	9 cut(s)	84, 111, 128, 168, 257, 394, 411, 530, 586
CviQI	GTAC	2 cut(s)	149, 228
DdeI	CTNAG	4 cut(s)	390, 438, 531, 548
DpnI	GATC	1 cut(s)	348
DpnII	GATC	1 cut(s)	346
Ecl136II	GAGCTC	2 cut(s)	111, 411
Eco24I	GRGCYC	2 cut(s)	113, 413
Eco47I	GGWCC	1 cut(s)	35
Eco53kI	GAGCTC	2 cut(s)	111, 411
Eco57I	CTGAAG	1 cut(s)	129
EcoICRI	GAGCTC	2 cut(s)	111, 411
EcoRI	GAATTC	1 cut(s)	541
EcoT38I	GRGCYC	2 cut(s)	113, 413
FaeI	CATG	2 cut(s)	71, 191
FaiI	YATR	5 cut(s)	69, 189, 239, 288, 306
FatI	CATG	2 cut(s)	67, 187
FbaI	TGATCA	1 cut(s)	346
FokI	GGATG	1 cut(s)	463
FriOI	GRGCYC	2 cut(s)	113, 413
FspBI	CTAG	1 cut(s)	396
HaeIII	GGCC	1 cut(s)	128
Hin1II	CATG	2 cut(s)	71, 191
HincII	GTYRAC	1 cut(s)	208
HindII	GTYRAC	1 cut(s)	208
HinfI	GANTC	4 cut(s)	52, 184, 386, 434
HphI	GGTGA	6 cut(s)	29, 245, 341, 356, 377, 474
Hpy166II	GTNNAC	1 cut(s)	208
Hpy188I	TCNGA	1 cut(s)	44
Hpy8I	GTNNAC	1 cut(s)	208
HpyAV	CCTTC	1 cut(s)	421
HpyCH4V	TGCA	2 cut(s)	155, 491
HpyF10VI	GCNNNNNNNGC	1 cut(s)	417
HpyF3I	CTNAG	4 cut(s)	390, 438, 531, 548
Hsp92II	CATG	2 cut(s)	71, 191
Ksp22I	TGATCA	1 cut(s)	346
Kzo9I	GATC	1 cut(s)	346
LmnI	GCTCC	4 cut(s)	116, 165, 331, 408
LpnPI	CCDG	6 cut(s)	81, 98, 182, 216, 425, 498
LweI	GCATC	2 cut(s)	149, 478
MaeI	CTAG	1 cut(s)	396
MaeIII	GTNAC	1 cut(s)	480
MalI	GATC	1 cut(s)	348
MboI	GATC	1 cut(s)	346
MboII	GAAGA	3 cut(s)	135, 371, 560
MhlI	GDGCHC	3 cut(s)	113, 336, 413
MluCI	AATT	4 cut(s)	77, 291, 380, 541
MlyI	GAGTC	1 cut(s)	443
MnlI	CCTC	8 cut(s)	38, 70, 75, 117, 211, 289, 513, 543
MseI	TTAA	1 cut(s)	276
MslI	CAYNNNNRTG	3 cut(s)	192, 339, 354
MspA1I	CMGCKG	2 cut(s)	95, 257
MwoI	GCNNNNNNNGC	1 cut(s)	417
NdeII	GATC	1 cut(s)	346
NlaIII	CATG	2 cut(s)	71, 191
NlaIV	GGNNCC	1 cut(s)	167
NmuCI	GTSAC	1 cut(s)	480
PfeI	GAWTC	3 cut(s)	52, 184, 386
PleI	GAGTC	1 cut(s)	442
PpsI	GAGTC	1 cut(s)	442
PsiI	TTATAA	1 cut(s)	288
Psp124BI	GAGCTC	2 cut(s)	113, 413
PspN4I	GGNNCC	1 cut(s)	167
PspPI	GGNCC	2 cut(s)	35, 126
PvuII	CAGCTG	1 cut(s)	257
RsaI	GTAC	2 cut(s)	150, 229
RsaNI	GTAC	2 cut(s)	149, 228
RseI	CAYNNNNRTG	3 cut(s)	192, 339, 354
SacI	GAGCTC	2 cut(s)	113, 413
SaqAI	TTAA	1 cut(s)	276
Sau3AI	GATC	1 cut(s)	346
Sau96I	GGNCC	2 cut(s)	35, 126
ScaI	AGTACT	2 cut(s)	150, 229
SchI	GAGTC	1 cut(s)	443
SduI	GDGCHC	3 cut(s)	113, 336, 413
SetI	ASST	8 cut(s)	19, 37, 113, 203, 259, 413, 444, 588
SfaNI	GCATC	2 cut(s)	149, 478
SinI	GGWCC	1 cut(s)	35
SmiMI	CAYNNNNRTG	3 cut(s)	192, 339, 354
Sse9I	AATT	4 cut(s)	77, 291, 380, 541
SsiI	CCGC	2 cut(s)	93, 243
SspI	AATATT	1 cut(s)	565
SspMI	CTAG	1 cut(s)	396
SstI	GAGCTC	2 cut(s)	113, 413
TaqI	TCGA	2 cut(s)	122, 182
TasI	AATT	4 cut(s)	77, 291, 380, 541
TatI	WGTACW	2 cut(s)	148, 227
TfiI	GAWTC	3 cut(s)	52, 184, 386
Tru1I	TTAA	1 cut(s)	276
Tru9I	TTAA	1 cut(s)	276
TscAI	CASTG	1 cut(s)	552
TseFI	GTSAC	1 cut(s)	480
Tsp45I	GTSAC	1 cut(s)	480
TspDTI	ATGAA	4 cut(s)	24, 210, 372, 467
TspRI	CASTG	1 cut(s)	552
VpaK11BI	GGWCC	1 cut(s)	35
XapI	RAATTY	1 cut(s)	541
XcmI	CCANNNNNNNNNTGG	2 cut(s)	92, 359
XspI	CTAG	1 cut(s)	396
ZrmI	AGTACT	2 cut(s)	150, 229

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.