pycom01g03150

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
2500506 .. 2500983
478 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g03150.4

Sequence Viewer

Length: 267 bp
ATGACTTCCGTTAGATCCAAGTCTTTCTCTACCCCTTTGACCCTGAGCCTTAGTCTTATAGTCACATCTTCTAACCGGAGTGTCTTTACCTCGGATATCCTTGTTCCTAATCGTGTCCTTTCTCGTGTGCCCACACATCCAATGAAGCATTTTCATCTCCGCTACACTCATTTTGTGTACGTGTTGATGCTTCATTGTCTCGTCGCATGTTCTGTTATAAATGAATTTCATTATATTGGATTGATTGGAGAACGGCAGTATATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

89

Amino Acids

10.11

Weight (kDa)

9.78

Isoelectric Point (pI)

37.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0024604)

Species Orthologous Gene IDs
pyrus_communis pycom01g03150 pycom07g12520 pycom07g12590

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 218
AciI CCGC 1 cut(s) 160
AclWI GGATC 1 cut(s) 9
AcsI RAATTY 1 cut(s) 224
AfaI GTAC 1 cut(s) 179
AflIII ACRYGT 1 cut(s) 180
Alw26I GTCTC 1 cut(s) 203
AlwI GGATC 1 cut(s) 9
ApoI RAATTY 1 cut(s) 224
BaeGI GKGCMC 1 cut(s) 132
BauI CACGAG 1 cut(s) 123
BcoDI GTCTC 1 cut(s) 203
BmsI GCATC 1 cut(s) 177
Bpu10I CCTNAGC 1 cut(s) 44
BsaAI YACGTR 1 cut(s) 181
BsaJI CCNNGG 1 cut(s) 90
BsaWI WCCGGW 1 cut(s) 75
BseDI CCNNGG 1 cut(s) 90
BseGI GGATG 1 cut(s) 136
BseMII CTCAG 1 cut(s) 35
BseSI GKGCMC 1 cut(s) 132
BsiSI CCGG 1 cut(s) 76
BsmAI GTCTC 1 cut(s) 203
Bsp1286I GDGCHC 1 cut(s) 132
Bsp143I GATC 1 cut(s) 14
BspACI CCGC 1 cut(s) 160
BspCNI CTCAG 1 cut(s) 36
BspPI GGATC 1 cut(s) 9
BssECI CCNNGG 1 cut(s) 90
BssMI GATC 1 cut(s) 14
BssSI CACGAG 1 cut(s) 123
Bst2BI CACGAG 1 cut(s) 123
BstBAI YACGTR 1 cut(s) 181
BstDEI CTNAG 2 cut(s) 44, 50
BstF5I GGATG 1 cut(s) 136
BstKTI GATC 1 cut(s) 17
BstMAI GTCTC 1 cut(s) 203
BstMBI GATC 1 cut(s) 14
BstNSI RCATGY 1 cut(s) 210
BstSLI GKGCMC 1 cut(s) 132
BstX2I RGATCY 1 cut(s) 14
BstYI RGATCY 1 cut(s) 14
BtsCI GGATG 1 cut(s) 136
Csp6I GTAC 1 cut(s) 178
CviAII CATG 1 cut(s) 207
CviJI RGCY 1 cut(s) 48
CviKI_1 RGCY 1 cut(s) 48
CviQI GTAC 1 cut(s) 178
DdeI CTNAG 2 cut(s) 44, 50
DpnI GATC 1 cut(s) 16
DpnII GATC 1 cut(s) 14
Eco32I GATATC 1 cut(s) 97
EcoRV GATATC 1 cut(s) 97
FaeI CATG 1 cut(s) 210
FaiI YATR 7 cut(s) 59, 208, 218, 234, 261, 263, 265
FatI CATG 1 cut(s) 206
FokI GGATG 1 cut(s) 123
HapII CCGG 1 cut(s) 76
Hin1II CATG 1 cut(s) 210
HpaII CCGG 1 cut(s) 76
Hpy166II GTNNAC 1 cut(s) 178
Hpy188I TCNGA 1 cut(s) 94
Hpy8I GTNNAC 1 cut(s) 178
Hpy99I CGWCG 1 cut(s) 206
HpyCH4IV ACGT 1 cut(s) 180
HpyF3I CTNAG 2 cut(s) 44, 50
HpySE526I ACGT 1 cut(s) 180
Hsp92II CATG 1 cut(s) 210
Kzo9I GATC 1 cut(s) 14
LpnPI CCDG 2 cut(s) 56, 89
LweI GCATC 1 cut(s) 177
MaeII ACGT 1 cut(s) 180
MaeIII GTNAC 1 cut(s) 61
MalI GATC 1 cut(s) 16
MboI GATC 1 cut(s) 14
MboII GAAGA 1 cut(s) 60
MflI RGATCY 1 cut(s) 14
MhlI GDGCHC 1 cut(s) 132
MluCI AATT 1 cut(s) 224
MnlI CCTC 1 cut(s) 100
MspI CCGG 1 cut(s) 76
NdeII GATC 1 cut(s) 14
NlaIII CATG 1 cut(s) 210
NmuCI GTSAC 1 cut(s) 61
NspI RCATGY 1 cut(s) 210
Ppu21I YACGTR 1 cut(s) 181
PsiI TTATAA 1 cut(s) 218
PsuI RGATCY 1 cut(s) 14
RsaI GTAC 1 cut(s) 179
RsaNI GTAC 1 cut(s) 178
Sau3AI GATC 1 cut(s) 14
SduI GDGCHC 1 cut(s) 132
SetI ASST 2 cut(s) 92, 183
SfaNI GCATC 1 cut(s) 177
Sse9I AATT 1 cut(s) 224
SsiI CCGC 1 cut(s) 160
TaiI ACGT 1 cut(s) 183
TasI AATT 1 cut(s) 224
TseFI GTSAC 1 cut(s) 61
Tsp45I GTSAC 1 cut(s) 61
TspDTI ATGAA 5 cut(s) 143, 158, 182, 218, 237
XapI RAATTY 1 cut(s) 224
XceI RCATGY 1 cut(s) 210
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.