pycom01g07650

PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Reverse (-)
8606171 .. 8606559
389 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 306 bp
ATGTGGGCAAGCAAAAAAGTAGGGTTGCCGGAGGCCGCCCTAGAAACCACCATTGGCATCTTCACCATCAAGGTAAATTCTCCTTCTTCCCAAACTTTCCCTTCAATTTTCTTTCACTTTCTCTGTAACCAAACAGACAATTCAATCCATGAAGTTTGTATCTTTGACATTATTTGTGTTTTCAAATCGTTAACAATAGTAGCTTTATTACAAACACTCGCCGAGGACTTGCAGGAACTTCATCGGGCTCGCTCGCAGAGGATGTTACGACAACGTAATTTCACAGAATCATCCAGGATTTCATAG

Protein Analysis

102

Amino Acids

11.52

Weight (kDa)

7.78

Isoelectric Point (pI)

48.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028884)

Species Orthologous Gene IDs
malus_domestica MD07G1218800.v1.1
pyrus_communis pycom01g07650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 36
AcsI RAATTY 1 cut(s) 76
AgsI TTSAA 3 cut(s) 105, 144, 184
AjnI CCWGG 1 cut(s) 293
AjuI GAANNNNNNNTTGG 2 cut(s) 36, 68
AluBI AGCT 1 cut(s) 203
AluI AGCT 1 cut(s) 203
AoxI GGCC 1 cut(s) 33
ApoI RAATTY 1 cut(s) 76
AsuHPI GGTGA 1 cut(s) 55
BanII GRGCYC 1 cut(s) 250
BccI CCATC 1 cut(s) 74
BciT130I CCWGG 1 cut(s) 295
BfaI CTAG 1 cut(s) 41
BisI GCNGC 1 cut(s) 36
BlsI GCNGC 1 cut(s) 37
Bme1390I CCNGG 1 cut(s) 295
BmrFI CCNGG 1 cut(s) 295
BmsI GCATC 1 cut(s) 66
BsaJI CCNNGG 1 cut(s) 222
BseBI CCWGG 1 cut(s) 295
BseDI CCNNGG 1 cut(s) 222
BseGI GGATG 2 cut(s) 267, 290
BshFI GGCC 1 cut(s) 35
BsiSI CCGG 1 cut(s) 29
BsnI GGCC 1 cut(s) 35
Bsp1286I GDGCHC 1 cut(s) 250
BspACI CCGC 1 cut(s) 36
BspANI GGCC 1 cut(s) 35
BssECI CCNNGG 1 cut(s) 222
Bst2UI CCWGG 1 cut(s) 295
BstC8I GCNNGC 3 cut(s) 10, 250, 254
BstF5I GGATG 2 cut(s) 267, 290
BstNI CCWGG 1 cut(s) 295
BstSCI CCNGG 1 cut(s) 293
BsuRI GGCC 1 cut(s) 35
BtsCI GGATG 2 cut(s) 267, 290
Cac8I GCNNGC 3 cut(s) 10, 250, 254
CviAII CATG 1 cut(s) 149
CviJI RGCY 3 cut(s) 35, 203, 248
CviKI_1 RGCY 3 cut(s) 35, 203, 248
Eco24I GRGCYC 1 cut(s) 250
EcoRII CCWGG 1 cut(s) 293
EcoT38I GRGCYC 1 cut(s) 250
FaeI CATG 1 cut(s) 152
FaiI YATR 2 cut(s) 150, 304
FatI CATG 1 cut(s) 148
Fnu4HI GCNGC 1 cut(s) 36
FokI GGATG 2 cut(s) 274, 277
FriOI GRGCYC 1 cut(s) 250
Fsp4HI GCNGC 1 cut(s) 36
FspBI CTAG 1 cut(s) 41
GluI GCNGC 1 cut(s) 36
HaeIII GGCC 1 cut(s) 35
HapII CCGG 1 cut(s) 29
Hin1II CATG 1 cut(s) 152
HincII GTYRAC 1 cut(s) 192
HindII GTYRAC 1 cut(s) 192
HinfI GANTC 1 cut(s) 287
HpaI GTTAAC 1 cut(s) 192
HpaII CCGG 1 cut(s) 29
HphI GGTGA 1 cut(s) 55
Hpy166II GTNNAC 1 cut(s) 192
Hpy8I GTNNAC 1 cut(s) 192
HpyAV CCTTC 2 cut(s) 93, 111
HpyCH4IV ACGT 1 cut(s) 274
HpyCH4V TGCA 1 cut(s) 232
HpySE526I ACGT 1 cut(s) 274
Hsp92II CATG 1 cut(s) 152
KspAI GTTAAC 1 cut(s) 192
LpnPI CCDG 3 cut(s) 42, 218, 280
LweI GCATC 1 cut(s) 66
MaeI CTAG 1 cut(s) 41
MaeII ACGT 1 cut(s) 274
MaeIII GTNAC 2 cut(s) 125, 264
MboII GAAGA 2 cut(s) 52, 78
MhlI GDGCHC 1 cut(s) 250
MluCI AATT 4 cut(s) 76, 105, 139, 277
MnlI CCTC 3 cut(s) 25, 217, 252
MseI TTAA 1 cut(s) 191
MspI CCGG 1 cut(s) 29
MspR9I CCNGG 1 cut(s) 295
MvaI CCWGG 1 cut(s) 295
NlaIII CATG 1 cut(s) 152
NmeAIII GCCGAG 1 cut(s) 247
PfeI GAWTC 1 cut(s) 287
PfoI TCCNGGA 1 cut(s) 293
PkrI GCNGC 1 cut(s) 37
Psp6I CCWGG 1 cut(s) 293
PspGI CCWGG 1 cut(s) 293
SaqAI TTAA 1 cut(s) 191
SatI GCNGC 1 cut(s) 36
ScrFI CCNGG 1 cut(s) 295
SduI GDGCHC 1 cut(s) 250
SetI ASST 3 cut(s) 75, 205, 277
SfaNI GCATC 1 cut(s) 66
Sse9I AATT 4 cut(s) 76, 105, 139, 277
SsiI CCGC 1 cut(s) 36
SspMI CTAG 1 cut(s) 41
StyD4I CCNGG 1 cut(s) 293
TaiI ACGT 1 cut(s) 277
TasI AATT 4 cut(s) 76, 105, 139, 277
TauI GCSGC 1 cut(s) 38
TfiI GAWTC 1 cut(s) 287
Tru1I TTAA 1 cut(s) 191
Tru9I TTAA 1 cut(s) 191
TspDTI ATGAA 3 cut(s) 165, 230, 291
XapI RAATTY 1 cut(s) 76
XspI CTAG 1 cut(s) 41
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.