Belongs to the SKP1 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD01G1062600.v1.1 |
| pyrus_communis | pycom01g09220 pycom01g09290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclI | AACGTT | 1 cut(s) | 6 |
| AclWI | GGATC | 2 cut(s) | 172, 332 |
| AcsI | RAATTY | 1 cut(s) | 233 |
| AflIII | ACRYGT | 1 cut(s) | 155 |
| AgsI | TTSAA | 1 cut(s) | 349 |
| AluBI | AGCT | 3 cut(s) | 246, 265, 374 |
| AluI | AGCT | 3 cut(s) | 246, 265, 374 |
| Alw21I | GWGCWC | 1 cut(s) | 376 |
| AlwI | GGATC | 2 cut(s) | 172, 332 |
| AoxI | GGCC | 1 cut(s) | 51 |
| ApoI | RAATTY | 1 cut(s) | 233 |
| AseI | ATTAAT | 1 cut(s) | 35 |
| AsuHPI | GGTGA | 2 cut(s) | 329, 382 |
| BanII | GRGCYC | 1 cut(s) | 376 |
| Bbv12I | GWGCWC | 1 cut(s) | 376 |
| BccI | CCATC | 1 cut(s) | 308 |
| BfaI | CTAG | 2 cut(s) | 243, 249 |
| BglII | AGATCT | 1 cut(s) | 271 |
| BmrI | ACTGGG | 1 cut(s) | 210 |
| BmuI | ACTGGG | 1 cut(s) | 210 |
| Bse1I | ACTGG | 1 cut(s) | 216 |
| BseGI | GGATG | 2 cut(s) | 102, 286 |
| BseNI | ACTGG | 1 cut(s) | 216 |
| BshFI | GGCC | 1 cut(s) | 53 |
| BsiHKAI | GWGCWC | 1 cut(s) | 376 |
| BsiSI | CCGG | 1 cut(s) | 341 |
| BsnI | GGCC | 1 cut(s) | 53 |
| Bsp1286I | GDGCHC | 1 cut(s) | 376 |
| Bsp143I | GATC | 5 cut(s) | 18, 139, 177, 271, 337 |
| BspANI | GGCC | 1 cut(s) | 53 |
| BspPI | GGATC | 2 cut(s) | 172, 332 |
| BsrI | ACTGG | 1 cut(s) | 216 |
| BssMI | GATC | 5 cut(s) | 18, 139, 177, 271, 337 |
| BstC8I | GCNNGC | 1 cut(s) | 211 |
| BstF5I | GGATG | 2 cut(s) | 102, 286 |
| BstKTI | GATC | 5 cut(s) | 21, 142, 180, 274, 340 |
| BstMBI | GATC | 5 cut(s) | 18, 139, 177, 271, 337 |
| BstNSI | RCATGY | 1 cut(s) | 159 |
| BstX2I | RGATCY | 2 cut(s) | 177, 271 |
| BstYI | RGATCY | 2 cut(s) | 177, 271 |
| BsuRI | GGCC | 1 cut(s) | 53 |
| BtsCI | GGATG | 2 cut(s) | 102, 286 |
| BtsIMutI | CAGTG | 1 cut(s) | 223 |
| Cac8I | GCNNGC | 1 cut(s) | 211 |
| CviAII | CATG | 2 cut(s) | 156, 182 |
| CviJI | RGCY | 5 cut(s) | 53, 170, 246, 265, 374 |
| CviKI_1 | RGCY | 5 cut(s) | 53, 170, 246, 265, 374 |
| DpnI | GATC | 5 cut(s) | 20, 141, 179, 273, 339 |
| DpnII | GATC | 5 cut(s) | 18, 139, 177, 271, 337 |
| Ecl136II | GAGCTC | 1 cut(s) | 374 |
| Eco147I | AGGCCT | 1 cut(s) | 53 |
| Eco24I | GRGCYC | 1 cut(s) | 376 |
| Eco53kI | GAGCTC | 1 cut(s) | 374 |
| EcoICRI | GAGCTC | 1 cut(s) | 374 |
| EcoT38I | GRGCYC | 1 cut(s) | 376 |
| FaeI | CATG | 2 cut(s) | 159, 185 |
| FaiI | YATR | 6 cut(s) | 76, 157, 163, 165, 183, 299 |
| FatI | CATG | 2 cut(s) | 155, 181 |
| FokI | GGATG | 2 cut(s) | 109, 293 |
| FriOI | GRGCYC | 1 cut(s) | 376 |
| FspBI | CTAG | 2 cut(s) | 243, 249 |
| HaeIII | GGCC | 1 cut(s) | 53 |
| HapII | CCGG | 1 cut(s) | 341 |
| Hin1II | CATG | 2 cut(s) | 159, 185 |
| HinfI | GANTC | 2 cut(s) | 86, 124 |
| HpaII | CCGG | 1 cut(s) | 341 |
| HphI | GGTGA | 2 cut(s) | 329, 382 |
| HpyAV | CCTTC | 1 cut(s) | 343 |
| HpyCH4IV | ACGT | 1 cut(s) | 6 |
| HpySE526I | ACGT | 1 cut(s) | 6 |
| Hsp92II | CATG | 2 cut(s) | 159, 185 |
| Kzo9I | GATC | 5 cut(s) | 18, 139, 177, 271, 337 |
| LpnPI | CCDG | 4 cut(s) | 115, 229, 354, 368 |
| MaeI | CTAG | 2 cut(s) | 243, 249 |
| MaeII | ACGT | 1 cut(s) | 6 |
| MalI | GATC | 5 cut(s) | 20, 141, 179, 273, 339 |
| MboI | GATC | 5 cut(s) | 18, 139, 177, 271, 337 |
| MboII | GAAGA | 1 cut(s) | 133 |
| MflI | RGATCY | 2 cut(s) | 177, 271 |
| MhlI | GDGCHC | 1 cut(s) | 376 |
| MluCI | AATT | 4 cut(s) | 44, 71, 233, 357 |
| MnlI | CCTC | 6 cut(s) | 43, 55, 64, 160, 178, 286 |
| MseI | TTAA | 4 cut(s) | 35, 201, 260, 396 |
| MspI | CCGG | 1 cut(s) | 341 |
| NdeII | GATC | 5 cut(s) | 18, 139, 177, 271, 337 |
| NlaIII | CATG | 2 cut(s) | 159, 185 |
| NspI | RCATGY | 1 cut(s) | 159 |
| PceI | AGGCCT | 1 cut(s) | 53 |
| PciI | ACATGT | 1 cut(s) | 155 |
| PfeI | GAWTC | 2 cut(s) | 86, 124 |
| PscI | ACATGT | 1 cut(s) | 155 |
| PshBI | ATTAAT | 1 cut(s) | 35 |
| Psp124BI | GAGCTC | 1 cut(s) | 376 |
| Psp1406I | AACGTT | 1 cut(s) | 6 |
| PsuI | RGATCY | 2 cut(s) | 177, 271 |
| SacI | GAGCTC | 1 cut(s) | 376 |
| SaqAI | TTAA | 4 cut(s) | 35, 201, 260, 396 |
| Sau3AI | GATC | 5 cut(s) | 18, 139, 177, 271, 337 |
| SduI | GDGCHC | 1 cut(s) | 376 |
| SetI | ASST | 6 cut(s) | 9, 66, 189, 248, 267, 376 |
| Sse9I | AATT | 4 cut(s) | 44, 71, 233, 357 |
| SseBI | AGGCCT | 1 cut(s) | 53 |
| SspMI | CTAG | 2 cut(s) | 243, 249 |
| SstI | GAGCTC | 1 cut(s) | 376 |
| StuI | AGGCCT | 1 cut(s) | 53 |
| TaiI | ACGT | 1 cut(s) | 9 |
| TaqI | TCGA | 1 cut(s) | 191 |
| TasI | AATT | 4 cut(s) | 44, 71, 233, 357 |
| TfiI | GAWTC | 2 cut(s) | 86, 124 |
| Tru1I | TTAA | 4 cut(s) | 35, 201, 260, 396 |
| Tru9I | TTAA | 4 cut(s) | 35, 201, 260, 396 |
| TscAI | CASTG | 1 cut(s) | 223 |
| TspDTI | ATGAA | 4 cut(s) | 17, 21, 113, 237 |
| TspRI | CASTG | 1 cut(s) | 223 |
| VspI | ATTAAT | 1 cut(s) | 35 |
| XapI | RAATTY | 1 cut(s) | 233 |
| XceI | RCATGY | 1 cut(s) | 159 |
| XspI | CTAG | 2 cut(s) | 243, 249 |