Coiled-coil domain-containing protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom01g18470 pycom13g21960 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 213 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcsI | RAATTY | 1 cut(s) | 132 |
| AgsI | TTSAA | 1 cut(s) | 131 |
| AjnI | CCWGG | 2 cut(s) | 80, 197 |
| AluBI | AGCT | 1 cut(s) | 66 |
| AluI | AGCT | 1 cut(s) | 66 |
| Alw21I | GWGCWC | 1 cut(s) | 68 |
| Ama87I | CYCGRG | 1 cut(s) | 119 |
| AoxI | GGCC | 3 cut(s) | 3, 91, 200 |
| ApoI | RAATTY | 1 cut(s) | 132 |
| AsuHPI | GGTGA | 1 cut(s) | 136 |
| AvaI | CYCGRG | 1 cut(s) | 119 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BanII | GRGCYC | 1 cut(s) | 68 |
| Bbv12I | GWGCWC | 1 cut(s) | 68 |
| BccI | CCATC | 2 cut(s) | 4, 232 |
| BciT130I | CCWGG | 2 cut(s) | 82, 199 |
| Bme1390I | CCNGG | 2 cut(s) | 82, 199 |
| BmeT110I | CYCGRG | 1 cut(s) | 119 |
| BmrFI | CCNGG | 2 cut(s) | 82, 199 |
| BsaJI | CCNNGG | 1 cut(s) | 120 |
| BseBI | CCWGG | 2 cut(s) | 82, 199 |
| BseDI | CCNNGG | 1 cut(s) | 120 |
| BseMII | CTCAG | 1 cut(s) | 53 |
| BshFI | GGCC | 3 cut(s) | 5, 93, 202 |
| BsiHKAI | GWGCWC | 1 cut(s) | 68 |
| BsiHKCI | CYCGRG | 1 cut(s) | 119 |
| BsnI | GGCC | 3 cut(s) | 5, 93, 202 |
| BsoBI | CYCGRG | 1 cut(s) | 119 |
| Bsp1286I | GDGCHC | 1 cut(s) | 68 |
| BspANI | GGCC | 3 cut(s) | 5, 93, 202 |
| BspCNI | CTCAG | 1 cut(s) | 54 |
| BssECI | CCNNGG | 1 cut(s) | 120 |
| Bst2UI | CCWGG | 2 cut(s) | 82, 199 |
| Bst4CI | ACNGT | 1 cut(s) | 154 |
| BstC8I | GCNNGC | 1 cut(s) | 115 |
| BstDEI | CTNAG | 1 cut(s) | 62 |
| BstNI | CCWGG | 2 cut(s) | 82, 199 |
| BstSCI | CCNGG | 2 cut(s) | 80, 197 |
| BsuRI | GGCC | 3 cut(s) | 5, 93, 202 |
| BtsIMutI | CAGTG | 2 cut(s) | 144, 159 |
| Cac8I | GCNNGC | 1 cut(s) | 115 |
| CviAII | CATG | 2 cut(s) | 165, 171 |
| CviJI | RGCY | 4 cut(s) | 5, 66, 93, 202 |
| CviKI_1 | RGCY | 4 cut(s) | 5, 66, 93, 202 |
| DdeI | CTNAG | 1 cut(s) | 62 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Ecl136II | GAGCTC | 1 cut(s) | 66 |
| Eco24I | GRGCYC | 1 cut(s) | 68 |
| Eco53kI | GAGCTC | 1 cut(s) | 66 |
| Eco88I | CYCGRG | 1 cut(s) | 119 |
| EcoICRI | GAGCTC | 1 cut(s) | 66 |
| EcoRII | CCWGG | 2 cut(s) | 80, 197 |
| EcoT38I | GRGCYC | 1 cut(s) | 68 |
| FaeI | CATG | 2 cut(s) | 168, 174 |
| FaiI | YATR | 3 cut(s) | 166, 172, 213 |
| FatI | CATG | 2 cut(s) | 164, 170 |
| FriOI | GRGCYC | 1 cut(s) | 68 |
| HaeIII | GGCC | 3 cut(s) | 5, 93, 202 |
| Hin1II | CATG | 2 cut(s) | 168, 174 |
| HincII | GTYRAC | 2 cut(s) | 159, 189 |
| HindII | GTYRAC | 2 cut(s) | 159, 189 |
| HinfI | GANTC | 1 cut(s) | 58 |
| HphI | GGTGA | 1 cut(s) | 136 |
| Hpy166II | GTNNAC | 2 cut(s) | 159, 189 |
| Hpy188I | TCNGA | 1 cut(s) | 63 |
| Hpy8I | GTNNAC | 2 cut(s) | 159, 189 |
| HpyAV | CCTTC | 1 cut(s) | 104 |
| HpyCH4III | ACNGT | 1 cut(s) | 154 |
| HpyF3I | CTNAG | 1 cut(s) | 62 |
| Hsp92II | CATG | 2 cut(s) | 168, 174 |
| LmnI | GCTCC | 1 cut(s) | 71 |
| LpnPI | CCDG | 5 cut(s) | 17, 67, 94, 184, 211 |
| MboII | GAAGA | 2 cut(s) | 67, 89 |
| MhlI | GDGCHC | 1 cut(s) | 68 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 2 cut(s) | 18, 132 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MnlI | CCTC | 2 cut(s) | 115, 231 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| MseI | TTAA | 1 cut(s) | 256 |
| MslI | CAYNNNNRTG | 1 cut(s) | 169 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MspR9I | CCNGG | 2 cut(s) | 82, 199 |
| MvaI | CCWGG | 2 cut(s) | 82, 199 |
| NlaIII | CATG | 2 cut(s) | 168, 174 |
| NmeAIII | GCCGAG | 1 cut(s) | 69 |
| PfeI | GAWTC | 1 cut(s) | 58 |
| PsiI | TTATAA | 1 cut(s) | 213 |
| Psp124BI | GAGCTC | 1 cut(s) | 68 |
| Psp6I | CCWGG | 2 cut(s) | 80, 197 |
| PspGI | CCWGG | 2 cut(s) | 80, 197 |
| RseI | CAYNNNNRTG | 1 cut(s) | 169 |
| SacI | GAGCTC | 1 cut(s) | 68 |
| SaqAI | TTAA | 1 cut(s) | 256 |
| ScrFI | CCNGG | 2 cut(s) | 82, 199 |
| SduI | GDGCHC | 1 cut(s) | 68 |
| SetI | ASST | 6 cut(s) | 48, 68, 77, 86, 126, 242 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 169 |
| Sse9I | AATT | 2 cut(s) | 18, 132 |
| SstI | GAGCTC | 1 cut(s) | 68 |
| StyD4I | CCNGG | 2 cut(s) | 80, 197 |
| TaaI | ACNGT | 1 cut(s) | 154 |
| TaqI | TCGA | 1 cut(s) | 149 |
| TasI | AATT | 2 cut(s) | 18, 132 |
| TfiI | GAWTC | 1 cut(s) | 58 |
| Tru1I | TTAA | 1 cut(s) | 256 |
| Tru9I | TTAA | 1 cut(s) | 256 |
| TscAI | CASTG | 2 cut(s) | 144, 159 |
| TspDTI | ATGAA | 1 cut(s) | 237 |
| TspRI | CASTG | 2 cut(s) | 144, 159 |
| XapI | RAATTY | 1 cut(s) | 132 |