pycom02g07900

Belongs to the beta-ketoacyl-ACP synthases family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
5550465 .. 5551197
733 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 273 bp
ATGCAATTCAGGGATGATACCTCTTGGTTTTACTCAGAGTTTCACGCTTTGTGGCATGCAGAGCACTGTCACAAAGAAACAACCAAAGCATCACGCCCTTGGGATAGTAATCATGATGGATTTGCTAGGGGAGAAGGAGATGGCGTTTTGCCTCTAGAAGAGTTAGAACATGGTAAGGTACTTTCTAAATCTATGATCTTGGCAATGGCATTACGGTGTCTGGATATCCCTCCGCTCTTTCTGTGTAGGATCACATCGTCTGTAAGGTTGTAG

Protein Analysis

91

Amino Acids

10.37

Weight (kDa)

6.02

Isoelectric Point (pI)

40.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029213)

Species Orthologous Gene IDs
pyrus_communis pycom02g07900 pycom02g07920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 235
AciI CCGC 1 cut(s) 233
AclWI GGATC 1 cut(s) 257
AfaI GTAC 1 cut(s) 180
Alw21I GWGCWC 1 cut(s) 66
AlwI GGATC 1 cut(s) 257
Bbv12I GWGCWC 1 cut(s) 66
BccI CCATC 2 cut(s) 110, 134
BfaI CTAG 2 cut(s) 126, 155
BmsI GCATC 1 cut(s) 98
BsaBI GATNNNNATC 1 cut(s) 108
BsaJI CCNNGG 1 cut(s) 98
BsaXI ACNNNNNCTCC 2 cut(s) 129, 159
Bse3DI GCAATG 1 cut(s) 210
Bse8I GATNNNNATC 1 cut(s) 108
BseDI CCNNGG 1 cut(s) 98
BseGI GGATG 1 cut(s) 19
BseJI GATNNNNATC 1 cut(s) 108
BseMI GCAATG 1 cut(s) 210
BseMII CTCAG 1 cut(s) 48
BsiHKAI GWGCWC 1 cut(s) 66
Bsp1286I GDGCHC 1 cut(s) 66
Bsp143I GATC 2 cut(s) 195, 249
BspACI CCGC 1 cut(s) 233
BspCNI CTCAG 1 cut(s) 47
BspHI TCATGA 1 cut(s) 112
BspPI GGATC 1 cut(s) 257
BsrBI CCGCTC 1 cut(s) 235
BsrDI GCAATG 1 cut(s) 210
BssECI CCNNGG 1 cut(s) 98
BssMI GATC 2 cut(s) 195, 249
BssT1I CCWWGG 1 cut(s) 98
Bst4CI ACNGT 2 cut(s) 68, 216
Bst6I CTCTTC 1 cut(s) 153
BstC8I GCNNGC 1 cut(s) 57
BstDEI CTNAG 1 cut(s) 34
BstF5I GGATG 1 cut(s) 19
BstKTI GATC 2 cut(s) 198, 252
BstMBI GATC 2 cut(s) 195, 249
BstMWI GCNNNNNNNGC 1 cut(s) 61
BstNSI RCATGY 1 cut(s) 59
BtsCI GGATG 1 cut(s) 19
BtsIMutI CAGTG 1 cut(s) 64
Cac8I GCNNGC 1 cut(s) 57
CciI TCATGA 1 cut(s) 112
Csp6I GTAC 1 cut(s) 179
CviAII CATG 3 cut(s) 56, 113, 170
CviQI GTAC 1 cut(s) 179
DdeI CTNAG 1 cut(s) 34
DpnI GATC 2 cut(s) 197, 251
DpnII GATC 2 cut(s) 195, 249
Eam1104I CTCTTC 1 cut(s) 153
EarI CTCTTC 1 cut(s) 153
Eco130I CCWWGG 1 cut(s) 98
Eco32I GATATC 1 cut(s) 226
EcoRV GATATC 1 cut(s) 226
EcoT14I CCWWGG 1 cut(s) 98
ErhI CCWWGG 1 cut(s) 98
FaeI CATG 3 cut(s) 59, 116, 173
FaiI YATR 4 cut(s) 57, 114, 171, 194
FatI CATG 3 cut(s) 55, 112, 169
FokI GGATG 1 cut(s) 26
FspBI CTAG 2 cut(s) 126, 155
Hin1II CATG 3 cut(s) 59, 116, 173
Hpy188I TCNGA 1 cut(s) 37
Hpy188III TCNNGA 3 cut(s) 113, 155, 221
HpyAV CCTTC 1 cut(s) 128
HpyCH4III ACNGT 2 cut(s) 68, 216
HpyCH4V TGCA 2 cut(s) 4, 59
HpyF10VI GCNNNNNNNGC 1 cut(s) 61
HpyF3I CTNAG 1 cut(s) 34
Hsp92II CATG 3 cut(s) 59, 116, 173
Kzo9I GATC 2 cut(s) 195, 249
LpnPI CCDG 1 cut(s) 206
LweI GCATC 1 cut(s) 98
MaeI CTAG 2 cut(s) 126, 155
MaeIII GTNAC 1 cut(s) 68
MalI GATC 2 cut(s) 197, 251
MbiI CCGCTC 1 cut(s) 235
MboI GATC 2 cut(s) 195, 249
MboII GAAGA 1 cut(s) 170
MhlI GDGCHC 1 cut(s) 66
MluCI AATT 1 cut(s) 5
MnlI CCTC 3 cut(s) 31, 162, 240
MslI CAYNNNNRTG 1 cut(s) 214
MwoI GCNNNNNNNGC 1 cut(s) 61
NdeII GATC 2 cut(s) 195, 249
NlaIII CATG 3 cut(s) 59, 116, 173
NmuCI GTSAC 1 cut(s) 68
NspI RCATGY 1 cut(s) 59
PaeI GCATGC 1 cut(s) 59
PagI TCATGA 1 cut(s) 112
RsaI GTAC 1 cut(s) 180
RsaNI GTAC 1 cut(s) 179
RseI CAYNNNNRTG 1 cut(s) 214
Sau3AI GATC 2 cut(s) 195, 249
SduI GDGCHC 1 cut(s) 66
SetI ASST 3 cut(s) 23, 180, 269
SfaNI GCATC 1 cut(s) 98
SmiMI CAYNNNNRTG 1 cut(s) 214
SphI GCATGC 1 cut(s) 59
Sse9I AATT 1 cut(s) 5
SsiI CCGC 1 cut(s) 233
SspMI CTAG 2 cut(s) 126, 155
StyI CCWWGG 1 cut(s) 98
TaaI ACNGT 2 cut(s) 68, 216
TasI AATT 1 cut(s) 5
TscAI CASTG 1 cut(s) 71
TseFI GTSAC 1 cut(s) 68
Tsp45I GTSAC 1 cut(s) 68
TspRI CASTG 1 cut(s) 71
XbaI TCTAGA 1 cut(s) 154
XceI RCATGY 1 cut(s) 59
XspI CTAG 2 cut(s) 126, 155
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.