pycom02g07920

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
5565441 .. 5565659
219 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g07920.1

Sequence Viewer

Length: 219 bp
ATGCTCTGTGGTGGTTCAGATTCAGGGATGATACCTCTTGGTTTTACTCAGAGTTTCACGTACAATAATCTTGTTCTTATGCAATTACTGGAGGATTGGGAGGCTTTGTGGCATGCAGAGCACTGTCACAAAGAAACAACCAAAGCATCACGCCCTTGGGATAGTGTAATGCGACCAATAACTATGCTAGATTCATTTATTCTTTTATTTCCACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

73

Amino Acids

8.27

Weight (kDa)

5.01

Isoelectric Point (pI)

51.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029213)

Species Orthologous Gene IDs
pyrus_communis pycom02g07900 pycom02g07920

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 62
Alw21I GWGCWC 1 cut(s) 123
Bbv12I GWGCWC 1 cut(s) 123
BfaI CTAG 1 cut(s) 188
BmsI GCATC 1 cut(s) 155
BpmI CTGGAG 1 cut(s) 110
BsaAI YACGTR 1 cut(s) 60
BsaJI CCNNGG 1 cut(s) 155
BsaXI ACNNNNNCTCC 2 cut(s) 92, 122
Bse1I ACTGG 1 cut(s) 93
BseDI CCNNGG 1 cut(s) 155
BseGI GGATG 1 cut(s) 33
BseMII CTCAG 1 cut(s) 62
BseNI ACTGG 1 cut(s) 93
BsiHKAI GWGCWC 1 cut(s) 123
Bsp1286I GDGCHC 1 cut(s) 123
BspCNI CTCAG 1 cut(s) 61
BsrI ACTGG 1 cut(s) 93
BssECI CCNNGG 1 cut(s) 155
BssT1I CCWWGG 1 cut(s) 155
Bst4CI ACNGT 2 cut(s) 125, 216
BstBAI YACGTR 1 cut(s) 60
BstC8I GCNNGC 1 cut(s) 114
BstDEI CTNAG 1 cut(s) 48
BstF5I GGATG 1 cut(s) 33
BstMWI GCNNNNNNNGC 1 cut(s) 118
BstNSI RCATGY 1 cut(s) 116
BtsCI GGATG 1 cut(s) 33
BtsIMutI CAGTG 2 cut(s) 121, 212
Cac8I GCNNGC 1 cut(s) 114
Csp6I GTAC 1 cut(s) 61
CviAII CATG 1 cut(s) 113
CviJI RGCY 1 cut(s) 104
CviKI_1 RGCY 1 cut(s) 104
CviQI GTAC 1 cut(s) 61
DdeI CTNAG 1 cut(s) 48
Eco130I CCWWGG 1 cut(s) 155
EcoT14I CCWWGG 1 cut(s) 155
ErhI CCWWGG 1 cut(s) 155
FaeI CATG 1 cut(s) 116
FaiI YATR 3 cut(s) 80, 114, 185
FatI CATG 1 cut(s) 112
FokI GGATG 1 cut(s) 40
FspBI CTAG 1 cut(s) 188
GsuI CTGGAG 1 cut(s) 110
Hin1II CATG 1 cut(s) 116
HinfI GANTC 2 cut(s) 20, 191
Hpy188I TCNGA 2 cut(s) 19, 51
HpyCH4III ACNGT 2 cut(s) 125, 216
HpyCH4IV ACGT 1 cut(s) 59
HpyCH4V TGCA 2 cut(s) 82, 116
HpyF10VI GCNNNNNNNGC 1 cut(s) 118
HpyF3I CTNAG 1 cut(s) 48
HpySE526I ACGT 1 cut(s) 59
Hsp92II CATG 1 cut(s) 116
LpnPI CCDG 2 cut(s) 9, 74
LweI GCATC 1 cut(s) 155
MaeI CTAG 1 cut(s) 188
MaeII ACGT 1 cut(s) 59
MaeIII GTNAC 1 cut(s) 125
MhlI GDGCHC 1 cut(s) 123
MluCI AATT 1 cut(s) 83
MnlI CCTC 3 cut(s) 45, 85, 94
MwoI GCNNNNNNNGC 1 cut(s) 118
NlaIII CATG 1 cut(s) 116
NmuCI GTSAC 1 cut(s) 125
NspI RCATGY 1 cut(s) 116
PaeI GCATGC 1 cut(s) 116
PfeI GAWTC 2 cut(s) 20, 191
Ppu21I YACGTR 1 cut(s) 60
RsaI GTAC 1 cut(s) 62
RsaNI GTAC 1 cut(s) 61
SduI GDGCHC 1 cut(s) 123
SetI ASST 2 cut(s) 37, 62
SfaNI GCATC 1 cut(s) 155
SgeI CNNG 9 cut(s) 36, 50, 70, 83, 101, 125, 162, 168, 200
SphI GCATGC 1 cut(s) 116
Sse9I AATT 1 cut(s) 83
SspMI CTAG 1 cut(s) 188
StyI CCWWGG 1 cut(s) 155
TaaI ACNGT 2 cut(s) 125, 216
TaiI ACGT 1 cut(s) 62
TasI AATT 1 cut(s) 83
TfiI GAWTC 2 cut(s) 20, 191
TscAI CASTG 2 cut(s) 128, 219
TseFI GTSAC 1 cut(s) 125
Tsp45I GTSAC 1 cut(s) 125
TspDTI ATGAA 1 cut(s) 183
TspRI CASTG 2 cut(s) 128, 219
XceI RCATGY 1 cut(s) 116
XspI CTAG 1 cut(s) 188
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.