pycom02g08470

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
5892241 .. 5904868
12628 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g08470.14

Sequence Viewer

Length: 1647 bp
ATGGGCAAATTTGGAATAACATTCCCCACCTGTTTTAAGGCAAGTTTAGTATTAATGTGCTTTGAAAAAAAAAAAAAAAGTTTCTGCTTGTTTAGTAAACTTTTTTGTAAAAGTACTTTTGAAAAAAAAAAAAAACAGTGTTATAGTGACAAAAAAAAGTATAATATTAGATGTGCCATTAATTTAATTTTCTTAACAAATAAAGCCAATATTCAACATATAATCCAACATTTATGCTGCTTCACGTTTTCAACTTTTTTTCAAAGCTTATTTTTGCTGCTTCACTTTTTCAGTTTTTTTTTTACCCAAAATTATGAAAATAAGCTGTTTTTAAGTCACCTCAGTACCAAACCAGTACTTAGTATATATCAATTTTTTATAATTTTTCTAGATATTTTCAGAGGAGTTTCTGTGAACATCCAAATATTAGGCTTATCACAAAATTTGATATGCCTAGTATTATTGATGTTCAAAGCATCTCACTTAACCCAGAAATATTCAAAAAGGATAGTGATTTTCAAAGTAAATCTACTGTATATTAATATATTCATCATAAGATATATATGCAATCGAAAATATAGAATATCATCTCTGCCCATATATATGTTAGATGGTGAATGTCTTCTAGCAACCAACAAGGCTTTCCACTTTGCGAGAGTTGGAGGGAGGGCTAACGTCCATCGTTATTGGTTTTTGCAATTTTTTTTGCATGAATTGAAAATGCATGCTGATGATGATTTTATGGCTAAAAAAATGATGCTGACGATTTGCATTAACATGGGTGGCTCAAAAACAAATGCGTACGGTACAGTCATTCAATCCCAATTGAACAAATCTAATCCAAATTTAAAGTTTCCGAAGAGGAGAAATAAGAAACAAAACCAAAATTCGGAAATGGGAGGTGGAGAGGAAGACTGCAGGACAATCCCAGCCATTGACCTAAAAAAATTTCCAGAAGTAGAAGAGTACTGGAAGCTGAGGGAAGATCGATCGGCTCTGATGTCCGAGATGATATCAGTGGTCAGATCTTTGCTGGACCTGCCCATGGAGATCAAGAAGCAGAACAAGGATGGGATAACTGGCAGTGGATACCTGGCTCCCAGCATAGTCAACCCTATCTATGAATCTTTGGGGTTCTACGACTTGGGATCGTGTCAAGCCTTGGACAGCTTTTGCTCTCAGTTAAATGCTTCTTCCTACCAGAGAGAGGTGATAGAGAAGTATGCTCAAGCAGTGTGTGAGCAGATTGTGGATATAGGGCAGAAATTGGCAGAGAGTCTAGGGTTGGCTGATAATGATTATCTCAAGAGGTGGCCCTGCCAGTTCAGGATAAACAAGTACACCTTCACTCCTGAATCAGTTGGATCCACTGGTCTACGATTACACACGGATTCAGGATTTCTAACCATTCTTCAAGACGATGAAATTGTCGGTGGCTTGGAAGTGATGGACAAATCCGGCACCCTTGTAGCTGTTGATCCTTGCCCAGGCACTCTCCTTGTTAATCTAGGGGATGTTGCTAAGGCATGGAGCAATGGGAGGGTGTGCAATGTGAAGCATAGAGTACAATGCAGGGAGGCAACAATTCGATTTCTTCTTCGAGATCGATCTCTACATTCCTCTTGGGACCGAAGGAGGAGGCGCTAG

Protein Analysis

549

Amino Acids

63.25

Weight (kDa)

9.42

Isoelectric Point (pI)

44.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029215)

Species Orthologous Gene IDs
pyrus_communis pycom02g08470 pycom07g08830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 380
Acc36I ACCTGC 1 cut(s) 1047
AccB1I GGYRCC 1 cut(s) 1460
AccI GTMKAC 1 cut(s) 1375
AclWI GGATC 4 cut(s) 1156, 1359, 1372, 1472
AcsI RAATTY 5 cut(s) 8, 442, 844, 886, 947
AfaI GTAC 8 cut(s) 115, 346, 357, 803, 808, 968, 1340, 1566
AfiI CCNNNNNNNGG 4 cut(s) 889, 1045, 1207, 1487
AjnI CCWGG 2 cut(s) 1092, 1486
AjuI GAANNNNNNNTTGG 2 cut(s) 626, 658
AluBI AGCT 5 cut(s) 267, 325, 976, 1170, 1472
AluI AGCT 5 cut(s) 267, 325, 976, 1170, 1472
AlwI GGATC 4 cut(s) 1156, 1359, 1372, 1472
AoxI GGCC 1 cut(s) 1313
ApeKI GCWGC 2 cut(s) 237, 277
ApoI RAATTY 5 cut(s) 8, 442, 844, 886, 947
AseI ATTAAT 3 cut(s) 53, 180, 540
Asp700I GAANNNNTTC 1 cut(s) 621
AspLEI GCGC 1 cut(s) 1644
AspS9I GGNCC 3 cut(s) 1036, 1314, 1627
AsuHPI GGTGA 3 cut(s) 329, 626, 1222
AvaII GGWCC 2 cut(s) 1036, 1627
BaeI ACNNNNGTAYC 2 cut(s) 328, 361
BamHI GGATCC 1 cut(s) 1364
BanI GGYRCC 1 cut(s) 1460
BbsI GAAGAC 2 cut(s) 614, 918
BbvCI CCTCAGC 1 cut(s) 977
BbvI GCAGC 2 cut(s) 224, 264
BccI CCATC 4 cut(s) 605, 687, 1064, 1441
BciT130I CCWGG 2 cut(s) 1094, 1488
BciVI GTATCC 1 cut(s) 1082
BfaI CTAG 6 cut(s) 389, 455, 626, 1280, 1508, 1645
BfmI CTRYAG 1 cut(s) 916
BfoI RGCGCY 1 cut(s) 1645
BfuAI ACCTGC 1 cut(s) 1047
BfuI GTATCC 1 cut(s) 1082
BglII AGATCT 1 cut(s) 1025
BisI GCNGC 2 cut(s) 238, 278
BlsI GCNGC 2 cut(s) 239, 279
BmcAI AGTACT 3 cut(s) 115, 357, 968
Bme1390I CCNGG 2 cut(s) 1094, 1488
Bme18I GGWCC 2 cut(s) 1036, 1627
BmgT120I GGNCC 3 cut(s) 1036, 1314, 1627
BmiI GGNNCC 4 cut(s) 1098, 1366, 1462, 1628
BmrFI CCNGG 2 cut(s) 1094, 1488
BmsI GCATC 2 cut(s) 485, 747
BpiI GAAGAC 2 cut(s) 614, 918
Bpu10I CCTNAGC 2 cut(s) 977, 1521
BpuEI CTTGAG 2 cut(s) 1212, 1289
Bsa29I ATCGAT 2 cut(s) 988, 1606
BsaJI CCNNGG 3 cut(s) 1044, 1161, 1486
BsaXI ACNNNNNCTCC 4 cut(s) 396, 426, 1333, 1363
Bsc4I CCNNNNNNNGG 4 cut(s) 889, 1045, 1207, 1487
Bse1I ACTGG 5 cut(s) 353, 974, 1084, 1321, 1375
Bse3DI GCAATG 2 cut(s) 1540, 1555
BseBI CCWGG 2 cut(s) 1094, 1488
BseCI ATCGAT 2 cut(s) 988, 1606
BseDI CCNNGG 3 cut(s) 1044, 1161, 1486
BseGI GGATG 3 cut(s) 417, 1075, 1519
BseLI CCNNNNNNNGG 4 cut(s) 889, 1045, 1207, 1487
BseMI GCAATG 2 cut(s) 1540, 1555
BseMII CTCAG 3 cut(s) 355, 968, 1193
BseNI ACTGG 5 cut(s) 353, 974, 1084, 1321, 1375
BseRI GAGGAG 2 cut(s) 417, 877
BseXI GCAGC 2 cut(s) 224, 264
BseYI CCCAGC 2 cut(s) 928, 1100
Bsh1285I CGRYCG 1 cut(s) 992
BshFI GGCC 1 cut(s) 1315
BshNI GGYRCC 1 cut(s) 1460
BshVI ATCGAT 2 cut(s) 988, 1606
BsiEI CGRYCG 1 cut(s) 992
BsiSI CCGG 1 cut(s) 1458
BsiWI CGTACG 1 cut(s) 801
BslFI GGGAC 1 cut(s) 1640
BslI CCNNNNNNNGG 4 cut(s) 889, 1045, 1207, 1487
BsmFI GGGAC 1 cut(s) 1640
BsnI GGCC 1 cut(s) 1315
Bsp143I GATC 9 cut(s) 985, 989, 1025, 1050, 1148, 1364, 1477, 1603, 1607
Bsp19I CCATGG 1 cut(s) 1044
BspANI GGCC 1 cut(s) 1315
BspCNI CTCAG 3 cut(s) 354, 969, 1192
BspDI ATCGAT 2 cut(s) 988, 1606
BspLI GGNNCC 4 cut(s) 1098, 1366, 1462, 1628
BspMAI CTGCAG 1 cut(s) 920
BspMI ACCTGC 1 cut(s) 1047
BspPI GGATC 4 cut(s) 1156, 1359, 1372, 1472
BspT107I GGYRCC 1 cut(s) 1460
BsrDI GCAATG 2 cut(s) 1540, 1555
BsrI ACTGG 5 cut(s) 353, 974, 1084, 1321, 1375
BssECI CCNNGG 3 cut(s) 1044, 1161, 1486
BssMI GATC 9 cut(s) 985, 989, 1025, 1050, 1148, 1364, 1477, 1603, 1607
BssT1I CCWWGG 2 cut(s) 1044, 1161
Bst2UI CCWGG 2 cut(s) 1094, 1488
Bst4CI ACNGT 4 cut(s) 138, 534, 806, 811
Bst6I CTCTTC 2 cut(s) 854, 957
BstC8I GCNNGC 1 cut(s) 726
BstDEI CTNAG 5 cut(s) 341, 359, 977, 1179, 1521
BstDSI CCRYGG 1 cut(s) 1044
BstENI CCTNNNNNAGG 1 cut(s) 1485
BstF5I GGATG 3 cut(s) 417, 1075, 1519
BstH2I RGCGCY 1 cut(s) 1645
BstHHI GCGC 1 cut(s) 1644
BstKTI GATC 9 cut(s) 988, 992, 1028, 1053, 1151, 1367, 1480, 1606, 1610
BstMBI GATC 9 cut(s) 985, 989, 1025, 1050, 1148, 1364, 1477, 1603, 1607
BstMCI CGRYCG 1 cut(s) 992
BstMWI GCNNNNNNNGC 1 cut(s) 1039
BstNI CCWGG 2 cut(s) 1094, 1488
BstNSI RCATGY 1 cut(s) 728
BstSCI CCNGG 2 cut(s) 1092, 1486
BstSFI CTRYAG 1 cut(s) 916
BstV1I GCAGC 2 cut(s) 224, 264
BstV2I GAAGAC 2 cut(s) 614, 918
BstX2I RGATCY 2 cut(s) 1025, 1364
BstYI RGATCY 2 cut(s) 1025, 1364
Bsu15I ATCGAT 2 cut(s) 988, 1606
BsuI GTATCC 1 cut(s) 1082
BsuRI GGCC 1 cut(s) 1315
BsuTUI ATCGAT 2 cut(s) 988, 1606
BtgI CCRYGG 1 cut(s) 1044
BtsCI GGATG 3 cut(s) 417, 1075, 1519
BtsI GCAGTG 2 cut(s) 1090, 1239
BtsIMutI CAGTG 5 cut(s) 143, 1023, 1090, 1239, 1368
BveI ACCTGC 1 cut(s) 1047
Cac8I GCNNGC 1 cut(s) 726
CfoI GCGC 1 cut(s) 1644
Cfr13I GGNCC 3 cut(s) 1036, 1314, 1627
ClaI ATCGAT 2 cut(s) 988, 1606
Csp6I GTAC 8 cut(s) 114, 345, 356, 802, 807, 967, 1339, 1565
CviAII CATG 5 cut(s) 710, 725, 778, 1045, 1527
CviQI GTAC 8 cut(s) 114, 345, 356, 802, 807, 967, 1339, 1565
DdeI CTNAG 5 cut(s) 341, 359, 977, 1179, 1521
DpnI GATC 9 cut(s) 987, 991, 1027, 1052, 1150, 1366, 1479, 1605, 1609
DpnII GATC 9 cut(s) 985, 989, 1025, 1050, 1148, 1364, 1477, 1603, 1607
DraI TTTAAA 1 cut(s) 849
Eam1104I CTCTTC 2 cut(s) 854, 957
EarI CTCTTC 2 cut(s) 854, 957
Eco130I CCWWGG 2 cut(s) 1044, 1161
Eco32I GATATC 1 cut(s) 1014
Eco47I GGWCC 2 cut(s) 1036, 1627
EcoNI CCTNNNNNAGG 1 cut(s) 1485
EcoRII CCWGG 2 cut(s) 1092, 1486
EcoRV GATATC 1 cut(s) 1014
EcoT14I CCWWGG 2 cut(s) 1044, 1161
EcoT22I ATGCAT 1 cut(s) 726
ErhI CCWWGG 2 cut(s) 1044, 1161
FaeI CATG 5 cut(s) 713, 728, 781, 1048, 1530
FalI AAGNNNNNCTT 2 cut(s) 1328, 1360
FaqI GGGAC 1 cut(s) 1640
FatI CATG 5 cut(s) 709, 724, 777, 1044, 1526
FblI GTMKAC 1 cut(s) 1375
Fnu4HI GCNGC 2 cut(s) 238, 278
FokI GGATG 3 cut(s) 404, 1082, 1526
Fsp4HI GCNGC 2 cut(s) 238, 278
FspBI CTAG 6 cut(s) 389, 455, 626, 1280, 1508, 1645
GlaI GCGC 1 cut(s) 1643
GluI GCNGC 2 cut(s) 238, 278
GsaI CCCAGC 2 cut(s) 932, 1104
HaeII RGCGCY 1 cut(s) 1645
HaeIII GGCC 1 cut(s) 1315
HapII CCGG 1 cut(s) 1458
HhaI GCGC 1 cut(s) 1644
Hin1II CATG 5 cut(s) 713, 728, 781, 1048, 1530
Hin6I GCGC 1 cut(s) 1642
HinP1I GCGC 1 cut(s) 1642
HincII GTYRAC 1 cut(s) 1111
HindII GTYRAC 1 cut(s) 1111
HindIII AAGCTT 1 cut(s) 265
HinfI GANTC 4 cut(s) 1124, 1276, 1355, 1391
HpaII CCGG 1 cut(s) 1458
HphI GGTGA 3 cut(s) 329, 626, 1222
Hpy166II GTNNAC 5 cut(s) 98, 415, 1111, 1341, 1376
Hpy188I TCNGA 6 cut(s) 401, 858, 892, 999, 1006, 1025
Hpy188III TCNNGA 9 cut(s) 389, 953, 1054, 1306, 1327, 1352, 1395, 1415, 1601
Hpy8I GTNNAC 5 cut(s) 98, 415, 1111, 1341, 1376
HpyAV CCTTC 2 cut(s) 1354, 1626
HpyCH4III ACNGT 4 cut(s) 138, 534, 806, 811
HpyCH4IV ACGT 2 cut(s) 245, 675
HpyCH4V TGCA 8 cut(s) 567, 697, 709, 724, 771, 918, 1548, 1572
HpyF10VI GCNNNNNNNGC 1 cut(s) 1039
HpyF3I CTNAG 5 cut(s) 341, 359, 977, 1179, 1521
HpySE526I ACGT 2 cut(s) 245, 675
Hsp92II CATG 5 cut(s) 713, 728, 781, 1048, 1530
HspAI GCGC 1 cut(s) 1642
Kzo9I GATC 9 cut(s) 985, 989, 1025, 1050, 1148, 1364, 1477, 1603, 1607
LmnI GCTCC 2 cut(s) 1102, 1530
Lsp1109I GCAGC 2 cut(s) 224, 264
LweI GCATC 2 cut(s) 485, 747
MaeI CTAG 6 cut(s) 389, 455, 626, 1280, 1508, 1645
MaeII ACGT 2 cut(s) 245, 675
MaeIII GTNAC 2 cut(s) 146, 335
MalI GATC 9 cut(s) 987, 991, 1027, 1052, 1150, 1366, 1479, 1605, 1609
MboI GATC 9 cut(s) 985, 989, 1025, 1050, 1148, 1364, 1477, 1603, 1607
MboII GAAGA 9 cut(s) 614, 871, 923, 974, 995, 1185, 1403, 1586, 1589
MfeI CAATTG 1 cut(s) 824
MflI RGATCY 2 cut(s) 1025, 1364
MlyI GAGTC 1 cut(s) 1285
MmeI TCCRAC 3 cut(s) 250, 640, 1342
Mph1103I ATGCAT 1 cut(s) 726
MroXI GAANNNNTTC 1 cut(s) 621
MslI CAYNNNNRTG 3 cut(s) 602, 729, 776
MspI CCGG 1 cut(s) 1458
MspR9I CCNGG 2 cut(s) 1094, 1488
MunI CAATTG 1 cut(s) 824
MvaI CCWGG 2 cut(s) 1094, 1488
MwoI GCNNNNNNNGC 1 cut(s) 1039
NcoI CCATGG 1 cut(s) 1044
NdeII GATC 9 cut(s) 985, 989, 1025, 1050, 1148, 1364, 1477, 1603, 1607
NlaIII CATG 5 cut(s) 713, 728, 781, 1048, 1530
NlaIV GGNNCC 4 cut(s) 1098, 1366, 1462, 1628
NmuCI GTSAC 2 cut(s) 146, 335
NsiI ATGCAT 1 cut(s) 726
NspI RCATGY 1 cut(s) 728
PaeI GCATGC 1 cut(s) 728
PdmI GAANNNNTTC 1 cut(s) 621
PfeI GAWTC 3 cut(s) 1124, 1355, 1391
Pfl23II CGTACG 1 cut(s) 801
PkrI GCNGC 2 cut(s) 239, 279
Ple19I CGATCG 1 cut(s) 992
PleI GAGTC 1 cut(s) 1284
PpsI GAGTC 1 cut(s) 1284
PshBI ATTAAT 3 cut(s) 53, 180, 540
PsiI TTATAA 1 cut(s) 380
Psp6I CCWGG 2 cut(s) 1092, 1486
PspFI CCCAGC 2 cut(s) 928, 1100
PspGI CCWGG 2 cut(s) 1092, 1486
PspLI CGTACG 1 cut(s) 801
PspN4I GGNNCC 4 cut(s) 1098, 1366, 1462, 1628
PspPI GGNCC 3 cut(s) 1036, 1314, 1627
PstI CTGCAG 1 cut(s) 920
PsuI RGATCY 2 cut(s) 1025, 1364
PvuI CGATCG 1 cut(s) 992
RsaI GTAC 8 cut(s) 115, 346, 357, 803, 808, 968, 1340, 1566
RsaNI GTAC 8 cut(s) 114, 345, 356, 802, 807, 967, 1339, 1565
RseI CAYNNNNRTG 3 cut(s) 602, 729, 776
SatI GCNGC 2 cut(s) 238, 278
Sau3AI GATC 9 cut(s) 985, 989, 1025, 1050, 1148, 1364, 1477, 1603, 1607
Sau96I GGNCC 3 cut(s) 1036, 1314, 1627
ScaI AGTACT 3 cut(s) 115, 357, 968
SchI GAGTC 1 cut(s) 1285
ScrFI CCNGG 2 cut(s) 1094, 1488
SfaNI GCATC 2 cut(s) 485, 747
SfcI CTRYAG 1 cut(s) 916
SinI GGWCC 2 cut(s) 1036, 1627
SmiMI CAYNNNNRTG 3 cut(s) 602, 729, 776
SmlI CTYRAG 2 cut(s) 1227, 1304
SmoI CTYRAG 2 cut(s) 1227, 1304
SphI GCATGC 1 cut(s) 728
SspI AATATT 4 cut(s) 166, 211, 426, 497
SspMI CTAG 6 cut(s) 389, 455, 626, 1280, 1508, 1645
StyD4I CCNGG 2 cut(s) 1092, 1486
StyI CCWWGG 2 cut(s) 1044, 1161
TaaI ACNGT 4 cut(s) 138, 534, 806, 811
TaiI ACGT 2 cut(s) 248, 678
TaqI TCGA 5 cut(s) 571, 988, 1588, 1600, 1606
TaqII GACCGA 1 cut(s) 1644
TatI WGTACW 5 cut(s) 113, 355, 966, 1338, 1564
TfiI GAWTC 3 cut(s) 1124, 1355, 1391
TscAI CASTG 5 cut(s) 143, 1023, 1090, 1239, 1375
TseFI GTSAC 2 cut(s) 146, 335
TseI GCWGC 2 cut(s) 237, 277
Tsp45I GTSAC 2 cut(s) 146, 335
TspDTI ATGAA 5 cut(s) 330, 538, 726, 1137, 1437
TspGWI ACGGA 1 cut(s) 1403
TspRI CASTG 5 cut(s) 143, 1023, 1090, 1239, 1375
VpaK11BI GGWCC 2 cut(s) 1036, 1627
VspI ATTAAT 3 cut(s) 53, 180, 540
XagI CCTNNNNNAGG 1 cut(s) 1485
XapI RAATTY 5 cut(s) 8, 442, 844, 886, 947
XbaI TCTAGA 1 cut(s) 388
XceI RCATGY 1 cut(s) 728
XmiI GTMKAC 1 cut(s) 1375
XmnI GAANNNNTTC 1 cut(s) 621
XspI CTAG 6 cut(s) 389, 455, 626, 1280, 1508, 1645
ZrmI AGTACT 3 cut(s) 115, 357, 968
Zsp2I ATGCAT 1 cut(s) 726
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.