pycom02g19510

Apoptosis antagonizing transcription factor

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
17382864 .. 17383754
891 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g19510.2

Sequence Viewer

Length: 420 bp
ATGAAGATCGTTCTTAAGGGTCAAGCAGTGAAGAACCAAAAGGCTCTCTGGGACAAAGCTCTTGAGTTCAGATTCTTGCTTCAGAAAGCATTCTCAAATTCAAATAGATTACCACAGCCAGTTAGGTCTTTATTTTGTGATTCACATCAGGTTGTCAGTACAGCATATTCTGATCTAGTTGACTCATCAAAGCGAACTTTAGATTCTCTAGCGGAACTACAAGAGGCTTTACTTGAAAAGAATCCGTCCATCGTTCAAGCAACAGATAGTATGTGCAAAGTACATTTATCATACTATTATATTTATTTTGTAATACAATTGGCTCTCTATTATTGTTGTGCATTTGCTATTGGCGTGATAAGAATTGCCAGTATGTGTAAGGTTTGCTATGCCGGTACTGAGTTATTATTAAGAGAGTAA

Protein Analysis

140

Amino Acids

15.8

Weight (kDa)

8.73

Isoelectric Point (pI)

37.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0029220)

Species Orthologous Gene IDs
pyrus_communis pycom02g19510 pycom02g22600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 212
AcsI RAATTY 1 cut(s) 97
AcuI CTGAAG 1 cut(s) 65
AfaI GTAC 3 cut(s) 160, 282, 397
AflII CTTAAG 1 cut(s) 14
AgsI TTSAA 3 cut(s) 102, 236, 257
AluBI AGCT 1 cut(s) 59
AluI AGCT 1 cut(s) 59
ApoI RAATTY 1 cut(s) 97
Asp700I GAANNNNTTC 1 cut(s) 89
BccI CCATC 1 cut(s) 257
BfaI CTAG 2 cut(s) 176, 209
BfrI CTTAAG 1 cut(s) 14
BpuEI CTTGAG 1 cut(s) 83
BsaBI GATNNNNATC 1 cut(s) 144
Bse118I RCCGGY 1 cut(s) 392
Bse1I ACTGG 2 cut(s) 119, 369
Bse8I GATNNNNATC 1 cut(s) 144
BseJI GATNNNNATC 1 cut(s) 144
BseMII CTCAG 1 cut(s) 390
BseNI ACTGG 2 cut(s) 119, 369
BsiSI CCGG 1 cut(s) 393
BslFI GGGAC 1 cut(s) 65
BsmFI GGGAC 1 cut(s) 65
BsmI GAATGC 1 cut(s) 89
Bsp143I GATC 2 cut(s) 6, 172
BspACI CCGC 1 cut(s) 212
BspCNI CTCAG 1 cut(s) 391
BspTI CTTAAG 1 cut(s) 14
BsrFI RCCGGY 1 cut(s) 392
BsrI ACTGG 2 cut(s) 119, 369
BssAI RCCGGY 1 cut(s) 392
BssMI GATC 2 cut(s) 6, 172
BstAFI CTTAAG 1 cut(s) 14
BstDEI CTNAG 1 cut(s) 399
BstKTI GATC 2 cut(s) 9, 175
BstMBI GATC 2 cut(s) 6, 172
BtsI GCAGTG 1 cut(s) 33
BtsIMutI CAGTG 1 cut(s) 33
Cfr10I RCCGGY 1 cut(s) 392
Csp6I GTAC 3 cut(s) 159, 281, 396
CviJI RGCY 5 cut(s) 44, 59, 118, 227, 323
CviKI_1 RGCY 5 cut(s) 44, 59, 118, 227, 323
CviQI GTAC 3 cut(s) 159, 281, 396
DdeI CTNAG 1 cut(s) 399
DpnI GATC 2 cut(s) 8, 174
DpnII GATC 2 cut(s) 6, 172
Eco57I CTGAAG 1 cut(s) 65
FaiI YATR 6 cut(s) 166, 272, 292, 300, 374, 390
FaqI GGGAC 1 cut(s) 65
FspBI CTAG 2 cut(s) 176, 209
HapII CCGG 1 cut(s) 393
HincII GTYRAC 1 cut(s) 181
HindII GTYRAC 1 cut(s) 181
HinfI GANTC 5 cut(s) 72, 140, 182, 203, 241
HpaII CCGG 1 cut(s) 393
Hpy166II GTNNAC 1 cut(s) 181
Hpy188I TCNGA 3 cut(s) 71, 84, 172
Hpy188III TCNNGA 1 cut(s) 62
Hpy8I GTNNAC 1 cut(s) 181
HpyCH4V TGCA 2 cut(s) 276, 341
HpyF3I CTNAG 1 cut(s) 399
Kzo9I GATC 2 cut(s) 6, 172
LpnPI CCDG 5 cut(s) 34, 132, 134, 382, 406
MaeI CTAG 2 cut(s) 176, 209
MalI GATC 2 cut(s) 8, 174
MboI GATC 2 cut(s) 6, 172
MboII GAAGA 2 cut(s) 16, 43
MfeI CAATTG 1 cut(s) 317
MluCI AATT 3 cut(s) 97, 317, 363
MlyI GAGTC 1 cut(s) 176
MnlI CCTC 1 cut(s) 217
MroXI GAANNNNTTC 1 cut(s) 89
MseI TTAA 2 cut(s) 15, 410
MspCI CTTAAG 1 cut(s) 14
MspI CCGG 1 cut(s) 393
MunI CAATTG 1 cut(s) 317
Mva1269I GAATGC 1 cut(s) 89
NdeII GATC 2 cut(s) 6, 172
PctI GAATGC 1 cut(s) 89
PdmI GAANNNNTTC 1 cut(s) 89
PfeI GAWTC 4 cut(s) 72, 140, 203, 241
PleI GAGTC 1 cut(s) 176
PpsI GAGTC 1 cut(s) 176
RsaI GTAC 3 cut(s) 160, 282, 397
RsaNI GTAC 3 cut(s) 159, 281, 396
SaqAI TTAA 2 cut(s) 15, 410
Sau3AI GATC 2 cut(s) 6, 172
SchI GAGTC 1 cut(s) 176
SetI ASST 4 cut(s) 61, 128, 153, 384
SmlI CTYRAG 2 cut(s) 14, 62
SmoI CTYRAG 2 cut(s) 14, 62
Sse9I AATT 3 cut(s) 97, 317, 363
SsiI CCGC 1 cut(s) 212
SspMI CTAG 2 cut(s) 176, 209
TasI AATT 3 cut(s) 97, 317, 363
TatI WGTACW 2 cut(s) 158, 280
TfiI GAWTC 4 cut(s) 72, 140, 203, 241
Tru1I TTAA 2 cut(s) 15, 410
Tru9I TTAA 2 cut(s) 15, 410
TscAI CASTG 1 cut(s) 33
TspDTI ATGAA 1 cut(s) 17
TspGWI ACGGA 1 cut(s) 234
TspRI CASTG 1 cut(s) 33
Vha464I CTTAAG 1 cut(s) 14
XapI RAATTY 1 cut(s) 97
XmnI GAANNNNTTC 1 cut(s) 89
XspI CTAG 2 cut(s) 176, 209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.