pycom02g19750

No description available

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Reverse (-)
17683983 .. 17684813
831 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g19750.1

Sequence Viewer

Length: 231 bp
ATGCAGGTTCATCATGGTGGTGCTGGGACTACGGCTACAGGATTGAGAGCTGGGGTAATGTTCTTTTCAGTCAGTGTTTTTTTTTTTCAATTAGCATTATGTTGTTCACTTTGTTTATTAAAATCTGATTGCACCAAAAGACGGCCTTCAGGAGTGCACAAACTACTGAAAGTAGGAAACTCTACTCAGAATTTAGACCGTACCACAAAAAAGATAATGCAGACAGCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

77

Amino Acids

8.25

Weight (kDa)

10.08

Isoelectric Point (pI)

23.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0029221)

Species Orthologous Gene IDs
pyrus_communis pycom02g19750 pycom05g01930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 190
AcuI CTGAAG 1 cut(s) 132
AfaI GTAC 1 cut(s) 202
AfiI CCNNNNNNNGG 1 cut(s) 141
AgsI TTSAA 1 cut(s) 89
AluBI AGCT 1 cut(s) 50
AluI AGCT 1 cut(s) 50
Alw21I GWGCWC 1 cut(s) 159
Alw44I GTGCAC 1 cut(s) 155
AoxI GGCC 1 cut(s) 143
ApaLI GTGCAC 1 cut(s) 155
ApoI RAATTY 1 cut(s) 190
BaeGI GKGCMC 1 cut(s) 159
Bbv12I GWGCWC 1 cut(s) 159
BceAI ACGGC 2 cut(s) 48, 158
BfmI CTRYAG 1 cut(s) 36
Bsc4I CCNNNNNNNGG 1 cut(s) 141
BseLI CCNNNNNNNGG 1 cut(s) 141
BseMII CTCAG 1 cut(s) 200
BseSI GKGCMC 1 cut(s) 159
BseYI CCCAGC 2 cut(s) 23, 50
BshFI GGCC 1 cut(s) 145
BsiHKAI GWGCWC 1 cut(s) 159
BslFI GGGAC 1 cut(s) 40
BslI CCNNNNNNNGG 1 cut(s) 141
BsmFI GGGAC 1 cut(s) 40
BsnI GGCC 1 cut(s) 145
Bsp1286I GDGCHC 1 cut(s) 159
BspANI GGCC 1 cut(s) 145
BspCNI CTCAG 1 cut(s) 199
Bst4CI ACNGT 1 cut(s) 200
BstDEI CTNAG 1 cut(s) 186
BstSFI CTRYAG 1 cut(s) 36
BstSLI GKGCMC 1 cut(s) 159
BsuRI GGCC 1 cut(s) 145
BtsIMutI CAGTG 1 cut(s) 79
Csp6I GTAC 1 cut(s) 201
CviAII CATG 2 cut(s) 14, 228
CviJI RGCY 3 cut(s) 35, 50, 145
CviKI_1 RGCY 3 cut(s) 35, 50, 145
CviQI GTAC 1 cut(s) 201
DdeI CTNAG 1 cut(s) 186
Eco57I CTGAAG 1 cut(s) 132
FaeI CATG 2 cut(s) 17, 231
FaiI YATR 3 cut(s) 15, 100, 229
FalI AAGNNNNNCTT 2 cut(s) 130, 162
FaqI GGGAC 1 cut(s) 40
FatI CATG 2 cut(s) 13, 227
GsaI CCCAGC 2 cut(s) 27, 54
HaeIII GGCC 1 cut(s) 145
Hin1II CATG 2 cut(s) 17, 231
Hpy166II GTNNAC 2 cut(s) 107, 157
Hpy188I TCNGA 2 cut(s) 127, 189
Hpy188III TCNNGA 1 cut(s) 150
Hpy8I GTNNAC 2 cut(s) 107, 157
HpyAV CCTTC 1 cut(s) 156
HpyCH4III ACNGT 1 cut(s) 200
HpyCH4V TGCA 4 cut(s) 4, 132, 157, 220
HpyF3I CTNAG 1 cut(s) 186
Hsp92II CATG 2 cut(s) 17, 231
LpnPI CCDG 4 cut(s) 9, 24, 36, 135
MhlI GDGCHC 1 cut(s) 159
MluCI AATT 2 cut(s) 89, 190
MseI TTAA 1 cut(s) 119
MslI CAYNNNNRTG 2 cut(s) 15, 18
NlaIII CATG 2 cut(s) 17, 231
PspFI CCCAGC 2 cut(s) 23, 50
RsaI GTAC 1 cut(s) 202
RsaNI GTAC 1 cut(s) 201
RseI CAYNNNNRTG 2 cut(s) 15, 18
SaqAI TTAA 1 cut(s) 119
SduI GDGCHC 1 cut(s) 159
SetI ASST 2 cut(s) 9, 52
SfcI CTRYAG 1 cut(s) 36
SgeI CNNG 6 cut(s) 17, 26, 36, 51, 63, 162
SmiMI CAYNNNNRTG 2 cut(s) 15, 18
Sse9I AATT 2 cut(s) 89, 190
TaaI ACNGT 1 cut(s) 200
TasI AATT 2 cut(s) 89, 190
Tru1I TTAA 1 cut(s) 119
Tru9I TTAA 1 cut(s) 119
TscAI CASTG 1 cut(s) 79
TspRI CASTG 1 cut(s) 79
VneI GTGCAC 1 cut(s) 155
XapI RAATTY 1 cut(s) 190
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.