pycom02g20710

Glycosyl transferases group 1

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
18760216 .. 18760879
664 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 357 bp
ATGCTGGTTGTAGTTGTTGGAAGTTCTTTTTTCTACGATGAGCTTTCATGGGACTATGCTGTGGCAATGCATTCTATAGGGCCACTGCTAATAAAATATGCAAGGAGGGATGATGCAGGAGAGCCGTTTAAATTTGTTTTCTTATGTGGTAATTCCTCTGATGATGCTTTCCAGGAAGTTACTTCACATCTGGGACTTCTTCATGGATCTGTACGGCATTATGGCTTGAATGGTGATGTGAACAGTGTGTTATTAATGGCTGACATTGTTCTCTACGGTTCTTCACAAGATGTGCAGGGTTTTCCGCCATTACTTTATCCGTGCCATGACCTTTGGGATCCCTGTTATTGCACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

119

Amino Acids

13.13

Weight (kDa)

4.53

Isoelectric Point (pI)

48.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0028856)

Species Orthologous Gene IDs
malus_domestica MD07G1075200.v1.1
pyrus_communis pycom02g20710

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 305
AclWI GGATC 3 cut(s) 214, 332, 345
AcsI RAATTY 1 cut(s) 131
AfaI GTAC 1 cut(s) 213
AgsI TTSAA 1 cut(s) 229
AjnI CCWGG 1 cut(s) 171
AluBI AGCT 1 cut(s) 43
AluI AGCT 1 cut(s) 43
AlwI GGATC 3 cut(s) 214, 332, 345
AoxI GGCC 1 cut(s) 80
ApoI RAATTY 1 cut(s) 131
AseI ATTAAT 1 cut(s) 254
AspS9I GGNCC 1 cut(s) 80
AsuHPI GGTGA 1 cut(s) 245
BamHI GGATCC 1 cut(s) 337
BceAI ACGGC 2 cut(s) 109, 230
BciT130I CCWGG 1 cut(s) 173
BfmI CTRYAG 1 cut(s) 75
Bme1390I CCNGG 1 cut(s) 173
BmgT120I GGNCC 1 cut(s) 80
BmiI GGNNCC 1 cut(s) 339
BmrFI CCNGG 1 cut(s) 173
BmsI GCATC 2 cut(s) 103, 154
Bse3DI GCAATG 1 cut(s) 72
BseBI CCWGG 1 cut(s) 173
BseGI GGATG 1 cut(s) 115
BseMI GCAATG 1 cut(s) 72
BsgI GTGCAG 1 cut(s) 314
BshFI GGCC 1 cut(s) 82
BslFI GGGAC 2 cut(s) 65, 207
BsmFI GGGAC 2 cut(s) 65, 207
BsmI GAATGC 1 cut(s) 70
BsnI GGCC 1 cut(s) 82
Bsp143I GATC 2 cut(s) 206, 337
BspACI CCGC 1 cut(s) 305
BspANI GGCC 1 cut(s) 82
BspLI GGNNCC 1 cut(s) 339
BspPI GGATC 3 cut(s) 214, 332, 345
BsrDI GCAATG 1 cut(s) 72
BssMI GATC 2 cut(s) 206, 337
Bst2UI CCWGG 1 cut(s) 173
Bst4CI ACNGT 2 cut(s) 245, 278
BstF5I GGATG 1 cut(s) 115
BstKTI GATC 2 cut(s) 209, 340
BstMBI GATC 2 cut(s) 206, 337
BstNI CCWGG 1 cut(s) 173
BstSCI CCNGG 1 cut(s) 171
BstSFI CTRYAG 1 cut(s) 75
BstX2I RGATCY 2 cut(s) 206, 337
BstYI RGATCY 2 cut(s) 206, 337
BsuRI GGCC 1 cut(s) 82
BtsCI GGATG 1 cut(s) 115
BtsI GCAGTG 1 cut(s) 83
BtsIMutI CAGTG 2 cut(s) 83, 250
Cfr13I GGNCC 1 cut(s) 80
Csp6I GTAC 1 cut(s) 212
CviAII CATG 3 cut(s) 48, 203, 326
CviJI RGCY 5 cut(s) 43, 82, 124, 225, 260
CviKI_1 RGCY 5 cut(s) 43, 82, 124, 225, 260
CviQI GTAC 1 cut(s) 212
DpnI GATC 2 cut(s) 208, 339
DpnII GATC 2 cut(s) 206, 337
DraI TTTAAA 1 cut(s) 130
EciI GGCGGA 1 cut(s) 294
EcoRII CCWGG 1 cut(s) 171
EcoT22I ATGCAT 1 cut(s) 72
FaeI CATG 3 cut(s) 51, 206, 329
FaiI YATR 8 cut(s) 49, 57, 77, 99, 145, 204, 222, 327
FaqI GGGAC 2 cut(s) 65, 207
FatI CATG 3 cut(s) 47, 202, 325
FokI GGATG 1 cut(s) 122
HaeIII GGCC 1 cut(s) 82
Hin1II CATG 3 cut(s) 51, 206, 329
HphI GGTGA 1 cut(s) 245
Hpy166II GTNNAC 1 cut(s) 241
Hpy188I TCNGA 1 cut(s) 160
Hpy8I GTNNAC 1 cut(s) 241
HpyCH4III ACNGT 2 cut(s) 245, 278
HpyCH4V TGCA 5 cut(s) 70, 101, 116, 295, 351
Hsp92II CATG 3 cut(s) 51, 206, 329
Kzo9I GATC 2 cut(s) 206, 337
LpnPI CCDG 5 cut(s) 102, 158, 176, 185, 281
LweI GCATC 2 cut(s) 103, 154
MaeIII GTNAC 1 cut(s) 178
MalI GATC 2 cut(s) 208, 339
MboI GATC 2 cut(s) 206, 337
MboII GAAGA 2 cut(s) 191, 273
MflI RGATCY 2 cut(s) 206, 337
MluCI AATT 2 cut(s) 131, 151
MnlI CCTC 2 cut(s) 99, 166
Mph1103I ATGCAT 1 cut(s) 72
MseI TTAA 2 cut(s) 129, 254
MspR9I CCNGG 1 cut(s) 173
Mva1269I GAATGC 1 cut(s) 70
MvaI CCWGG 1 cut(s) 173
NdeII GATC 2 cut(s) 206, 337
NlaIII CATG 3 cut(s) 51, 206, 329
NlaIV GGNNCC 1 cut(s) 339
NsiI ATGCAT 1 cut(s) 72
PctI GAATGC 1 cut(s) 70
PfoI TCCNGGA 1 cut(s) 171
PshBI ATTAAT 1 cut(s) 254
Psp6I CCWGG 1 cut(s) 171
PspGI CCWGG 1 cut(s) 171
PspN4I GGNNCC 1 cut(s) 339
PspPI GGNCC 1 cut(s) 80
PsuI RGATCY 2 cut(s) 206, 337
RsaI GTAC 1 cut(s) 213
RsaNI GTAC 1 cut(s) 212
SaqAI TTAA 2 cut(s) 129, 254
Sau3AI GATC 2 cut(s) 206, 337
Sau96I GGNCC 1 cut(s) 80
ScrFI CCNGG 1 cut(s) 173
SetI ASST 3 cut(s) 45, 333, 356
SfaNI GCATC 2 cut(s) 103, 154
SfcI CTRYAG 1 cut(s) 75
Sse9I AATT 2 cut(s) 131, 151
SsiI CCGC 1 cut(s) 305
StyD4I CCNGG 1 cut(s) 171
TaaI ACNGT 2 cut(s) 245, 278
TasI AATT 2 cut(s) 131, 151
Tru1I TTAA 2 cut(s) 129, 254
Tru9I TTAA 2 cut(s) 129, 254
TscAI CASTG 2 cut(s) 90, 250
TspDTI ATGAA 2 cut(s) 36, 191
TspGWI ACGGA 1 cut(s) 309
TspRI CASTG 2 cut(s) 90, 250
VspI ATTAAT 1 cut(s) 254
XapI RAATTY 1 cut(s) 131
Zsp2I ATGCAT 1 cut(s) 72
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.