pycom03g13670
NAC Family

Inactive beta-amylase 4

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
14773471 .. 14773833
363 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g13670.2

Sequence Viewer

Length: 282 bp
ATGATTTCTTATGCAACATTGTTACATTGCTCACACAGATATCCTGCACATCCTTTGGCTAATGGTAGGTGGAAGTTTCCTGGAATCGGTGAATTCCAGTGCTATGACAAGTACATGATGGGTGACCTAAAGATGGCTGCACGCAAGGAAGGAAAACCTCAGTGGGAAGAGAAGGGACCACAAAAGGCTGGCTGTTACAACAGTCTCCCATCTGAAGTTCCTTTCTTAGGAGAGGGAGAGGAAAGCTTTCTTTCTGATTATGGGTGTTTTTTCCTTGTATGA

Protein Analysis

94

Amino Acids

10.59

Weight (kDa)

6.27

Isoelectric Point (pI)

46.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029236)

Species Orthologous Gene IDs
pyrus_communis pycom03g13670 pycom04g04970

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 92
AcuI CTGAAG 1 cut(s) 234
AfaI GTAC 1 cut(s) 113
AfiI CCNNNNNNNGG 3 cut(s) 86, 133, 227
AjnI CCWGG 1 cut(s) 79
AluBI AGCT 1 cut(s) 246
AluI AGCT 1 cut(s) 246
Alw26I GTCTC 1 cut(s) 209
ApeKI GCWGC 1 cut(s) 137
ApoI RAATTY 1 cut(s) 92
Asp700I GAANNNNTTC 1 cut(s) 246
AspS9I GGNCC 1 cut(s) 176
AsuHPI GGTGA 2 cut(s) 101, 134
AvaII GGWCC 1 cut(s) 176
BbvI GCAGC 1 cut(s) 124
BccI CCATC 3 cut(s) 112, 127, 217
BciT130I CCWGG 1 cut(s) 81
BcoDI GTCTC 1 cut(s) 209
BisI GCNGC 1 cut(s) 138
BlsI GCNGC 1 cut(s) 139
Bme1390I CCNGG 1 cut(s) 81
Bme18I GGWCC 1 cut(s) 176
BmgT120I GGNCC 1 cut(s) 176
BmiI GGNNCC 1 cut(s) 177
BmrFI CCNGG 1 cut(s) 81
Bsc4I CCNNNNNNNGG 3 cut(s) 86, 133, 227
Bse1I ACTGG 1 cut(s) 97
Bse3DI GCAATG 1 cut(s) 25
BseBI CCWGG 1 cut(s) 81
BseGI GGATG 1 cut(s) 49
BseLI CCNNNNNNNGG 3 cut(s) 86, 133, 227
BseMI GCAATG 1 cut(s) 25
BseMII CTCAG 1 cut(s) 173
BseNI ACTGG 1 cut(s) 97
BseXI GCAGC 1 cut(s) 124
BsgI GTGCAG 2 cut(s) 30, 123
BslFI GGGAC 1 cut(s) 189
BslI CCNNNNNNNGG 3 cut(s) 86, 133, 227
BsmAI GTCTC 1 cut(s) 209
BsmFI GGGAC 1 cut(s) 189
BspCNI CTCAG 1 cut(s) 172
BspLI GGNNCC 1 cut(s) 177
BsrDI GCAATG 1 cut(s) 25
BsrI ACTGG 1 cut(s) 97
Bst2UI CCWGG 1 cut(s) 81
Bst4CI ACNGT 1 cut(s) 203
Bst6I CTCTTC 1 cut(s) 162
BstC8I GCNNGC 2 cut(s) 142, 190
BstDEI CTNAG 2 cut(s) 159, 226
BstEII GGTNACC 1 cut(s) 122
BstENI CCTNNNNNAGG 1 cut(s) 225
BstF5I GGATG 1 cut(s) 49
BstMAI GTCTC 1 cut(s) 209
BstNI CCWGG 1 cut(s) 81
BstPI GGTNACC 1 cut(s) 122
BstSCI CCNGG 1 cut(s) 79
BstV1I GCAGC 1 cut(s) 124
BtsCI GGATG 1 cut(s) 49
BtsIMutI CAGTG 2 cut(s) 104, 167
Cac8I GCNNGC 2 cut(s) 142, 190
Cfr13I GGNCC 1 cut(s) 176
Csp6I GTAC 1 cut(s) 112
CviAII CATG 1 cut(s) 115
CviJI RGCY 5 cut(s) 59, 137, 188, 192, 246
CviKI_1 RGCY 5 cut(s) 59, 137, 188, 192, 246
CviQI GTAC 1 cut(s) 112
DdeI CTNAG 2 cut(s) 159, 226
Eam1104I CTCTTC 1 cut(s) 162
EarI CTCTTC 1 cut(s) 162
Eco32I GATATC 1 cut(s) 41
Eco47I GGWCC 1 cut(s) 176
Eco57I CTGAAG 1 cut(s) 234
Eco91I GGTNACC 1 cut(s) 122
EcoNI CCTNNNNNAGG 1 cut(s) 225
EcoO65I GGTNACC 1 cut(s) 122
EcoRI GAATTC 1 cut(s) 92
EcoRII CCWGG 1 cut(s) 79
EcoRV GATATC 1 cut(s) 41
FaeI CATG 1 cut(s) 118
FaiI YATR 5 cut(s) 12, 105, 116, 261, 280
FaqI GGGAC 1 cut(s) 189
FatI CATG 1 cut(s) 114
Fnu4HI GCNGC 1 cut(s) 138
FokI GGATG 1 cut(s) 36
Fsp4HI GCNGC 1 cut(s) 138
GluI GCNGC 1 cut(s) 138
Hin1II CATG 1 cut(s) 118
HindIII AAGCTT 1 cut(s) 244
HinfI GANTC 1 cut(s) 84
HphI GGTGA 2 cut(s) 101, 134
Hpy188I TCNGA 2 cut(s) 214, 256
HpyAV CCTTC 2 cut(s) 143, 166
HpyCH4III ACNGT 1 cut(s) 203
HpyCH4V TGCA 3 cut(s) 14, 47, 140
HpyF3I CTNAG 2 cut(s) 159, 226
Hsp92II CATG 1 cut(s) 118
LpnPI CCDG 5 cut(s) 57, 66, 93, 110, 174
Lsp1109I GCAGC 1 cut(s) 124
MaeIII GTNAC 3 cut(s) 21, 122, 194
MboII GAAGA 1 cut(s) 179
MluCI AATT 1 cut(s) 92
MnlI CCTC 3 cut(s) 168, 226, 232
MroXI GAANNNNTTC 1 cut(s) 246
MspR9I CCNGG 1 cut(s) 81
MvaI CCWGG 1 cut(s) 81
NlaIII CATG 1 cut(s) 118
NlaIV GGNNCC 1 cut(s) 177
NmuCI GTSAC 1 cut(s) 122
PdmI GAANNNNTTC 1 cut(s) 246
PfeI GAWTC 1 cut(s) 84
PfoI TCCNGGA 1 cut(s) 79
PkrI GCNGC 1 cut(s) 139
Psp6I CCWGG 1 cut(s) 79
PspEI GGTNACC 1 cut(s) 122
PspGI CCWGG 1 cut(s) 79
PspN4I GGNNCC 1 cut(s) 177
PspPI GGNCC 1 cut(s) 176
RsaI GTAC 1 cut(s) 113
RsaNI GTAC 1 cut(s) 112
SatI GCNGC 1 cut(s) 138
Sau96I GGNCC 1 cut(s) 176
ScrFI CCNGG 1 cut(s) 81
SetI ASST 4 cut(s) 71, 129, 160, 248
SgeI CNNG 9 cut(s) 56, 92, 93, 109, 121, 127, 153, 157, 201
SinI GGWCC 1 cut(s) 176
Sse9I AATT 1 cut(s) 92
StyD4I CCNGG 1 cut(s) 79
TaaI ACNGT 1 cut(s) 203
TasI AATT 1 cut(s) 92
TatI WGTACW 1 cut(s) 111
TfiI GAWTC 1 cut(s) 84
TscAI CASTG 2 cut(s) 104, 167
TseFI GTSAC 1 cut(s) 122
TseI GCWGC 1 cut(s) 137
Tsp45I GTSAC 1 cut(s) 122
TspRI CASTG 2 cut(s) 104, 167
VpaK11BI GGWCC 1 cut(s) 176
XagI CCTNNNNNAGG 1 cut(s) 225
XapI RAATTY 1 cut(s) 92
XmnI GAANNNNTTC 1 cut(s) 246
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.