pycom03g15970

Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
17184126 .. 17184740
615 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 375 bp
ATGCCTGTCTTAAAAGCAAATGGAGAGGTTTTTGCACTGTGTATGCAGTTAAATGACGATGTTGTATTTCATATGCAAGAAATGATTTCATCAAACTCAATCAAAATTACATTTGATCTACAAGTGGTTGGACTGACATTTTTCTTATACAATGAAGGCGTGAAATATGTGGACAATTACAATTTTTGTTTTCATGTCAAACCAACTTGCTTCACATATATTACGCCATTGTTGACATGTATTCTTTCGTTGTTTTCAACAGTGCTTTTATGTTGCACCAGGAAAATTCTATTTGAGGATGGGAACCACCTGTATCGGTTCTTGGATGATGATCCAATTGTATCTCATTCATGGTTCGGACAGTTATCAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

125

Amino Acids

14.32

Weight (kDa)

4.98

Isoelectric Point (pI)

21.91

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0029239)

Species Orthologous Gene IDs
pyrus_communis pycom03g15970 pycom12g20600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 326
AcsI RAATTY 1 cut(s) 285
AflIII ACRYGT 1 cut(s) 236
AgsI TTSAA 1 cut(s) 258
AjnI CCWGG 1 cut(s) 278
AlwI GGATC 1 cut(s) 326
ApoI RAATTY 1 cut(s) 285
BccI CCATC 1 cut(s) 293
BciT130I CCWGG 1 cut(s) 280
Bme1390I CCNGG 1 cut(s) 280
BmiI GGNNCC 1 cut(s) 305
BmrFI CCNGG 1 cut(s) 280
BsaBI GATNNNNATC 1 cut(s) 330
Bse8I GATNNNNATC 1 cut(s) 330
BseBI CCWGG 1 cut(s) 280
BseGI GGATG 2 cut(s) 304, 331
BseJI GATNNNNATC 1 cut(s) 330
Bsp143I GATC 2 cut(s) 115, 331
BspLI GGNNCC 1 cut(s) 305
BspPI GGATC 1 cut(s) 326
BssMI GATC 2 cut(s) 115, 331
Bst2UI CCWGG 1 cut(s) 280
Bst4CI ACNGT 3 cut(s) 39, 262, 363
BstF5I GGATG 2 cut(s) 304, 331
BstKTI GATC 2 cut(s) 118, 334
BstMBI GATC 2 cut(s) 115, 331
BstNI CCWGG 1 cut(s) 280
BstNSI RCATGY 1 cut(s) 240
BstSCI CCNGG 1 cut(s) 278
BtsCI GGATG 2 cut(s) 304, 331
BtsIMutI CAGTG 2 cut(s) 35, 267
CviAII CATG 3 cut(s) 194, 237, 351
DpnI GATC 2 cut(s) 117, 333
DpnII GATC 2 cut(s) 115, 331
EcoRII CCWGG 1 cut(s) 278
FaeI CATG 3 cut(s) 197, 240, 354
FatI CATG 3 cut(s) 193, 236, 350
FauNDI CATATG 1 cut(s) 72
FokI GGATG 2 cut(s) 311, 338
Hin1II CATG 3 cut(s) 197, 240, 354
HincII GTYRAC 1 cut(s) 234
HindII GTYRAC 1 cut(s) 234
Hpy166II GTNNAC 2 cut(s) 172, 234
Hpy188I TCNGA 2 cut(s) 359, 370
Hpy8I GTNNAC 2 cut(s) 172, 234
HpyAV CCTTC 1 cut(s) 149
HpyCH4III ACNGT 3 cut(s) 39, 262, 363
HpyCH4V TGCA 4 cut(s) 35, 46, 76, 276
Hsp92II CATG 3 cut(s) 197, 240, 354
Kzo9I GATC 2 cut(s) 115, 331
LpnPI CCDG 4 cut(s) 18, 265, 292, 323
MalI GATC 2 cut(s) 117, 333
MboI GATC 2 cut(s) 115, 331
MfeI CAATTG 1 cut(s) 336
MluCI AATT 5 cut(s) 105, 175, 181, 285, 336
MmeI TCCRAC 1 cut(s) 109
MnlI CCTC 2 cut(s) 19, 289
MseI TTAA 2 cut(s) 11, 50
MspR9I CCNGG 1 cut(s) 280
MunI CAATTG 1 cut(s) 336
MvaI CCWGG 1 cut(s) 280
NdeI CATATG 1 cut(s) 72
NdeII GATC 2 cut(s) 115, 331
NlaIII CATG 3 cut(s) 197, 240, 354
NlaIV GGNNCC 1 cut(s) 305
NspI RCATGY 1 cut(s) 240
PciI ACATGT 1 cut(s) 236
PscI ACATGT 1 cut(s) 236
Psp6I CCWGG 1 cut(s) 278
PspGI CCWGG 1 cut(s) 278
PspN4I GGNNCC 1 cut(s) 305
SaqAI TTAA 2 cut(s) 11, 50
Sau3AI GATC 2 cut(s) 115, 331
ScrFI CCNGG 1 cut(s) 280
SetI ASST 2 cut(s) 30, 312
Sse9I AATT 5 cut(s) 105, 175, 181, 285, 336
StyD4I CCNGG 1 cut(s) 278
TaaI ACNGT 3 cut(s) 39, 262, 363
TasI AATT 5 cut(s) 105, 175, 181, 285, 336
Tru1I TTAA 2 cut(s) 11, 50
Tru9I TTAA 2 cut(s) 11, 50
TscAI CASTG 2 cut(s) 42, 267
TspDTI ATGAA 5 cut(s) 59, 78, 168, 182, 339
TspRI CASTG 2 cut(s) 42, 267
XapI RAATTY 1 cut(s) 285
XceI RCATGY 1 cut(s) 240
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.